© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0354000.1
AGTACAAAGCAAATTTATTGAGCATCTCAAACAACATGGTACAAAGTCGACAAGCTACTGCAACTTTTCACAGTTAACACTTATCAGGCAGTTGCAGGTAGAACTAGAATTACTGCTTCCCCCCTTTGTAAAAAGCAGTAGTTACAGTCACAGAACAGCCAAACATGACCTCAAAACAGAACAAAGGTGGATCACTGTTACAACAAGCCCAAAACATACAACATAATCGAACAAATTCCATTCGTGACATTCTGCAAGCTATGATATATGATACATACCAGATGGTAACTACTACCATTGGTTGCTAAGATGTTGACATGAATCGCTTCAGGAATGATTTCATTTGTTTCAATTAACTGGATGATGAAGGCTGGATACCCTGGATAAATATAAGAACTGATCATCACTTGTTGCTTACTTGCTTTTGTATGTGGACAACTTCAGTCCACCAAGTGTGCCATATCAATATGGTGCTGGTGGATAAGTTGAAGGATAGGGCGCAGGTGGATATGTGGGCTGTCCTTTTGGAGGTGGTGGGTAAGTTTGTCCATATGGTTGCGGTGGATATGGTTGTCCCTGCGGCTGCGGTGGGTATGGTTGTCCCTGTGGCTTTGGTGGGTATGGTTGTACTTGAGGCTGCGGTGGGTATGTTTCTCGCTGCGGCTGCGGTTGGTATGTTTCTCCCTGCGGCTGCGGTGGGTATGTTTGTCCCTGCGGCTGTGGTGGGTACGGCTGTGGAGGATATGTTGTACTTGTAGGAGGGTATGCCGCATGCTCAACATCGCGAGCTAGCAGAGATGGTGGTGGATGTGGGTATGCTGAAGTAGGATATGGCGCCGGGACATGGCTAGCAGGATAGGATTGATATGGCGGTACTGCAGGGTATCCTGCAGGGGGTAGTGCGTATGAAGGTGAGGGGGCAGCATATGGTACTGCTGGTACCGGCACTGGAAGAACAGAATGTGTGGTTGACGCGGCAGAAATTTTTCCCGGCTTGTTCTTCATTGCTGAAACATCAAAATGCATAATGAGCGTCACTTCCCCAGCAGACCTCATATGGCGTGTCTGGAGGGGCCATGAGGCATCATCATAGCCACGCGTAAGCACCTTATGCAGCTGCACCCTGCCATTGCCAATGAAATCATCATGGGTGAGCGTGTTGCTGTTCCACACTGTGACGGTTAGCTCACGAAGCCCCTCAATGAGAGGTATATGAAACTTCTCGTCAAAAGTAGGGTTCCTTCCCCCATCGGTGCAGGTGCGGGTGCGGAACTTGTTGGTGGCATACTCGATGCAGACGTAGGGATCCTGCCGCGTGAAGAACTCCGTGTCCCTCAGCTTCCTGCACCCAGTGACTCTGACTTCGAGGATCTGGCCTTGTATCGACATGGATGGCTACGGGCGCGGGTCGTCTCGCGGAGGAGCGGGGGAGGGGAAGAAAGAGAGGAGCTGAGTTGACGATGAACCGAGACGACTCTGCTAGAGCCTCTAGGCTAGTAGTGTTCGTATTGTAGGCTTGGAGCCTGCCCTGTTCGAACTTAAACAATTTTGCTTTTTTTGAGAACCACTCTAGAATCTGGATATGCCAAGACACTTGTGATTCATATAACAAAGTTAGGCAAGTCTATTTATAAGATGAACTGAAAGAATAGATTCATATTCGCAGAAAAAATGCTTTGCTAAAGGGATTGCGTTAAGTCTCCGCTGTGCTCATCTTCAGCCGCGTGCATCCTCAACTGCAAACGTGCCATTCAATTGCCAAGAGGTTTCCCGTCTTTGGGTTGTGAAATCCCATGTGCTGCACATATATAGGCATTCCGTGTCTGCTGCTATAAAGATCTAGGCAGGTCTTCAATCCCGCCCGCGGTACCGTAGCGGGTGAAACAAATCCCGGGACCCTCGTTAAGGCGAAATCAAAATACAAAGACACAGCAAGCATTTATTTTATATGTTCCTTGGCGATCTCGATGTGAACAAATGCAGGCGAAGTTTCCTTGCACGTACCGACCGAGTAAGTCAACCGACAAGTTGCCCCTCCCCGCTGCTGTGTGCCTTCCTTGTCAGCAGAGACGCGGTAAAAAAAAAAGATCCAACACCAACAGGTACAAAAAGTTCACAAGAAATGAAAAGAAATGAAGTGTGGACAACATCGTCTACCAACCCTAGCTACTATCCAACTTGATGTACTACTGTAGGAGTAATTCATTGTCCATTACACATCAGAACCACAATAAATTGTGTGGGGTAGTTCGTCTATATTTACAGTCAGCAACACATAGCCACAGGGAAGTGAGCTTACCATGAGTTTTCTGGTGTGTATTCTTTTTTTTTTGAGCTGTTCTTCCCTTGGACTTTGTTGTACAACAATCCTTACTTTTCCTATCACTAACTGACGGACTCATTTCACTCTACAATGCGGATTACTAATCACAAGCAGAAGCTCCAGGGCAGAAGTCAGATCGTGCATATGCCCCTTGCTTTGTCCAAAAACTCGTCCCTGCTTATGCAGCCATTCTCGGTTGGTTTCCACGCATGATATGGCGCCTGAACCTCAGCCCCAACTCTCCTTCCTGATCGCGAGGAATGAGTGCTTGCTCGTGTTCATCATCGTCAGACGCTGTAGTTGTTCCAGGTTCACTTGAATGGAGTGAGTCCTCACCAAAGTTGTGCAGCCTCCGCCCAATCAGATAACGGTCATCCCTAATGGAATTGTGGAGATTGGTGAACCAAACATGGAATCTCTTGCCACAGAAGAACAGCGCGCTGAATATCAGGCAGCCAAGCCACGCGAAACGGTAGACCGCTGAGTTCACAATGAGTGGGTAACCAAGCACTGGGAAGACACCCCTTGCAAGAACATATGGAACGCAGAGAGCTGTAAGGAGCTTGGTGACAATAGGCATTATGATTTCATGCAGGACCCATAGACCTCTCAAACGGGAGAAGCCATCCTCTCTAACCCTCTCAAACTTCGTCCTCCAGCTTTCATCAACCAAAGGTGCCATTTGATCCAACATAACCAGCCTAGTCCATATTTTTAAGAATATTAATCCAAGAGCCCAATCCTGATACAACAGGAAAACCGGACTCTCGTCAATAGGCACCCTCATGGGTACAATGACCAGTAACTCAAACAGGAGTCCAATCAACACAGGAATAACAAAGATCCATATTGACAGGAGAGCAGAACTCTTCACAACAATAGAGCACCACTTGCAGATTTGTTGCACTAGGAAGGCCAGTCGTCGTGATCGAATGTAATCAATTGCATATCTGGTTCCAGCTGCTGCACTCCAGATAATATAACATCCAATGCTGAAAGAGAATAAATCATTGCACTTGATGCCATGTGTGATTGGCAGGCGGGGAATAGCCTCAAAAACTAAACGACCAAGTGAGATTGGAATAACAATCATTCCAGCATTGAATATCAGCAGAGTCATCCATGCCAGTACAAGCAAGAGCACAATCCGAAGGACGAAACCATACTCTGAATCTCCCTGGTCATCAACATCAGATTCTTCAGCGACCTCGTTACTGTCATTGGCATTACCCCTGCCATTCAGATTATCAGCAACATGTTGTATCATACGCTGCTCCAGCTGTGGGGCAACCATTTCCCGGCCACCATGTACCCTATCTCTACCTGCTCTGCCATTCCAGTTCTCTTGCCCACCATTTTCTTCATGTCTTGGCAGTAAGAAATCAGTTAAGCCTAATGCCCAACCAACAGCAGCAAACCAATGACGCAGAAGTGCTTTAATTGTTGCACGAGGCTTGAAGTGCTCAATTGCAAACGGGATGCATATTTGGAACAGAAGCACATCAACTGGGATCTCTGTAAATGGGTCAAAAATGGTGATGTCCAGAGGAAAAATCGATGGAGCTACTCGCATGGCCAGTTTGACAGGTAAGAAAACAAGTATCACAATCAAGCTTCCATACACAGCAACAGACAGAAGAACTCGCCGGGCATGTTTATGCACAGGATCATCAATCAAATCCCTAAACGGATTGTAATTTGGATCGGCAGGGTCCCGCAAGAAATAAAGAACACCATTGCGCAGTACCCCTCGAAGAAGGCTGACAAATATGCTTATTTGAAGCATATATATAATCCCAACAAGCCAATGGATAGAGGAGCTTGCCAAGGGTGACATCGTGAAGAATTCAACTCTTTGAGCAATTGTTGCACCCAGCATCTTTAAGGTGCATACATCAAGCCACCAACCGCACATAAGGGGAAATACACCAAGTTCAATCACCAAAAGGAATGCAACTTTGACCATAGTCATGAGATGCTTCATTCCAGCAAAGAATTGCCTGCATAGAGATGGGATAGCCTCTAAAATGGTAGCTATACCGTAGAGCCTCCCAATGGTGAAACGTTCTCCCCTAGCATACCGCAGTAAAGCCAATGATCCAATGTACAAAAACACAAGGCAAAAGATAAACATATATCCCACAGCAAGAGTTGTCAGATCAGAAAGATAGGATGAGCCAATAGCAGTTCCTTTTATCAGACTACTCTTCCCAGAGGCCTGCATTACAGTAAGACCAGTGGCATTTATCTTCAATGATTGAGTAACCACCTCAATGACATGACCAATGACACCTTCATTATGGCTGTCAGCAGATAAGTTCTTCACGGCATTAAGTGCACTCTTCAATGTATCATTAGCCAATGAAATAGCAGTTTCCGTAAACGGCATCATTCTTGCCAGCATAGGACTAGAGGCTGAAGAGAAGAACCATGATAGATAGTACAGGACAATCCTTCCCAATGAGAATGGTACGAAGATCACAACAATGAGGAATATAGCATTGCTGGCCAGAACTGTTATTGCGTTCTCAACCAAGTGGAAAACAGGGCCTTGCATGCCTACAAGTTCATCAAAAGGAACATCCTCTGCACCATCTGCATCATCCAAACCATCTAGCATCTGCTCGACTTGAGCTTCAAGTCGTTCTAATCGAGCAGCAACATTTTCTGCATTTCTTCTCAAAAGTTCACCAGCACCAAGTCCTTGGGCTTCTGCTAATTCGTCAACGTTTCCATCTGCAGCAGGAACCCTGTTATTAGGACCAGGTAGCCTTCTGACAGCTCGTGCACCATGCCTTTCACGGCCCCCATCATCCCTCTCAGCATCATGCCCTCCAAGTTCCCGCAAGTGTCTTATATAGTCCCTTAAAGAGGTAGCTCCAAGAAATATAAGGACAATAATAGCTGAGAGAAGAAAACCATGTAAACAGTCACTTAGGATCAACTGAGCGCTGATATGACTCAAGAATAGCCTCTGTGCTTCACCAAGACTTCTCACGAATGTTAACCTCCATATCCAGTAAGTGATGAAGGGGATAATCATGAGCCAAACTGAAAGAACAAAGGCAAGCCGGAGGACAAACTGAAGCACATGGCACGCTTTCATCCCAACACCAACAATAAGTTCTTGGAAGGGGAGTCTTGACGGAGCATTGTCAGCATAGACGGGCGAGAAAGAGAATGCATGTTTGCAAACCTCGCACTGGCGGGAGTTGCTGTGGTCGAGCCACTGGAGGAGGCAGTCCTGGTGCACGAACTTGATGCTGCCGCTGCAGGCGCACGGGTACCGGAGCGGGTGCTCGTCGTCCCCCGGGTTCCGGCAGATCCGGCACACGTCCCCTTCCTCCTCCTCCTCGTCCTCCTCCGCCACCGCCGCGGTGGATGAGGGCGGCCGCGCCTCCTCCTGCTCGGCCGCGGGAGGCCGGTCCGCGGCGACGTCCGCCATGGCTGGGCGCGGCGGCGGCGGCGGCCGTGCGTGCGAGCGATCGCGCGGGGGAGGGGGGGGGGAGGGAGACCGCGTTGGGGCGGAGGAGGCGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0354000.1 | 6 | 25963948 | T | C |
| Osa06LNT0354000.1 | 6 | 25966292 | T | C |
| Osa06LNT0354000.1 | 6 | 25966577 | A | T |
| Osa06LNT0354000.1 | 6 | 25967368 | A | G |
| Osa06LNT0354000.1 | 6 | 25968555 | T | C |
| Osa06LNT0354000.1 | 6 | 25968807 | A | G |
| Osa06LNT0354000.1 | 6 | 25969867 | T | A |
| Osa06LNT0354000.1 | 6 | 25970361 | A | G |
| Osa06LNT0354000.1 | 6 | 25970472 | T | A |
| Osa06LNT0354000.1 | 6 | 25972118 | A | T |
| Osa06LNT0354000.1 | 6 | 25972292 | T | C |
| Osa06LNT0354000.1 | 6 | 25972832 | G | A |
| Osa06LNT0354000.1 | 6 | 25973230 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0354000.1 | osa-miR5539a | Cleavage | 5.0 | 16.664 | 1 | 22 |
| Osa06LNT0354000.1 | osa-miR5796 | Cleavage | 5.0 | 13.8 | 1 | 21 |
| Osa06LNT0354000.1 | osa-miR5826 | Translation | 5.0 | 18.77 | 1 | 24 |
| Osa06LNT0354000.1 | osa-miR5079b | Cleavage | 4.5 | 13.004 | 1 | 22 |
| Osa06LNT0354000.1 | osa-miR5079b | Translation | 5.0 | 14.153 | 1 | 22 |
| Osa06LNT0354000.1 | osa-miR5539b | Cleavage | 5.0 | 16.664 | 1 | 22 |
| Osa06LNT0354000.1 | osa-miR156a | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156b-5p | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156c-5p | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156d | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156e | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156f-5p | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156g-5p | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156h-5p | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156i | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156j-5p | Translation | 5.0 | 17.739 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR166c-5p | Cleavage | 4.5 | 19.882 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR156l-5p | Translation | 5.0 | 17.739 | 1 | 21 |
| Osa06LNT0354000.1 | osa-miR172c | Translation | 4.5 | 16.764 | 1 | 21 |
| Osa06LNT0354000.1 | osa-miR393b-3p | Cleavage | 4.0 | 16.672 | 1 | 21 |
| Osa06LNT0354000.1 | osa-miR530-5p | Cleavage | 5.0 | 23.794 | 1 | 20 |
| Osa06LNT0354000.1 | osa-miR529b | Cleavage | 4.5 | 17.766 | 1 | 21 |
| Osa06LNT0354000.1 | osa-miR2865 | Translation | 5.0 | 19.887 | 1 | 22 |
| Osa06LNT0354000.1 | osa-miR2872 | Cleavage | 3.5 | 16.813 | 1 | 21 |
| Osa06LNT0354000.1 | osa-miR2932 | Cleavage | 5.0 | 21.658 | 1 | 19 |
| Osa06LNT0354000.1 | osa-miR5076 | Translation | 5.0 | 6.679 | 1 | 22 |
| Osa06LNT0354000.1 | osa-miR5077 | Cleavage | 3.5 | 15.319 | 1 | 19 |
| Osa06LNT0354000.1 | osa-miR5079a | Cleavage | 4.5 | 13.004 | 1 | 22 |
| Osa06LNT0354000.1 | osa-miR5079a | Translation | 5.0 | 14.153 | 1 | 22 |
| Osa06LNT0354000.1 | osa-miR5491 | Translation | 4.0 | 11.509 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0354000.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354000.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354000.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0354000.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0354000.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0354000.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0354000.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)