© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0354300.1
GATCTCAACAAAACTTTGGATATATAGAATGAACCATCGTGTCAAACAATACTTACACGAAAGCTAGGCAGCCCTCCTGGAGTAAACATAGTAAAGAAGGGCTGCCAGGGCCATATGGTCCACCCAGCAGTAAACACACAACATAAGCTTCCACTTCAAAAAAAGGGAAATTGCAAGCTTGGCCAAGAATTGTAGTGATTTTGGAAGCTTTTCTTGCTGAATTAATGCTTCCTTAACATGTTTTTCATTATCAACATTGTAACCAATTTCTTTTGTCCGTATTCCTGGATGGAATCGATTTTTACTCCAAAATTGCCACATACCAAAATCTCAATGGGATGAGATTTCGGAATGCTATTCACAGCTCAAGGACCACACACATAAACTACATGACTTACATGGCAAAATCGGCATCTCCATCAAGTATGGAAATGCTAGTGTTTGTTTGCTGTCTTTGTATCGTCCACTGGTTTTCTTCATATATTAATGATAAACAGATGGGGGCTTGGTGTCACTGTGCCCGTATATCCAGTTGTTTCAGAGCAGACCTCATGTCATCAGTGCCATAACCCTCAATTCCAATGATGTTTGGGCTATCAAGTGCAACAACATCTTGTAAAGGATACCGCCTAACAGAATGGATTCTATTTGCAGATGTGTTGAATTCACCCTTAAGGATGACCGTCTTATGAAGACCTCCAAACAATTCTTCGTAATCTGAATCACCAGTTTCACCAACAAGAACCACCACATTTTGCAACTCTATGCCCCAGCGAACAGATAAGTACCTTAGAGCCTTAGACCGTGATGCGTGGATTGGAATTACAGATAGTCTGGTAGCACCATGGTTATACAGAGCGTGACAACGGAGTGACTGAATTCTCATCAACTTTTGCAGCTCCTTTAAAGGAGGTAAATGATTTGGATTGACCACTTTAAATGCAAGACAGTATGTTGAAGAGTGCTCTGGATCTTCGAAGATAACTTGTTTTTCAATCCTCCCTCTTCTTTCTACCACGGAAGAAGCCCACTTCACTAGATATTTCCTTAAACCTTCTCCTCCCCAATGATACTCTATATGTGATTGGTAACTACGATCTAATGCAAATGTAACACGGGAGTTGCTTGGTGTATCACCAGTACATGAAGGATAATACAAATCACTTCCACTATTGCATATGAAAGCATCGAAATCAGTAGGAAGCATGCCAGCAGACATTAATAGAGAATGTATCTCCCCTATTGTCAGGGAAGTTGACAACACAAAACCTGTCGATCCTGACAAATTTTCTTTACGTGCAGCCTCGATAGAATTTCTGACAATGCGAATCAGATCTTCCTTACTGACAGAATCTACAGCAATAACAGTGACATGCTTCCTTCCCTTAATAGGTGCCTTAATCCGGTCTTCATTGCTTGCAAAAGCAGGATGCCTTGGGCCAAGAGTTGATATCCTTGACAAGTAATTCTTGCAATGTTCAGGCCAAGAAAACTGATGTATATTTTTCAGCCCATTCTCTCGGCATTTTGACCAAAGTTGTTTTTCAGAAAGGAGTTTATAGAGTGCATCTGCAATTGCATGCTGATCATGGGGATCAACAAGGAGACCATTGTCCAGCACCTGGTGAATTTCAACAGGAGCTCCATTTTTTGTTGCAATTACAGGCAAACCATGCATGGCAGCCTCTATCAAGGTGACACCGAACTGTTCAAAGTAAGGCACATTTACAAAAGCACCCTTTGTTCTCACTGCTAAACGGTAAATATCAGGAACTTCCGAGTGTTTGTGACGCTTTGGGTATGCCACTTGACCATACAAATCATATTCATCAATCAATGTAAGTACTGATGTCAAAACAGCTGCACTCATATTATGCATCTTGGAAATAGCCTCACGGTTTCCCATTATCAATGTTAGATTAGCAAGCTCCCTCAGTGGTCGGCACTCACCAAACGCCTTCACAAGAGTAGTAATATTCTTTTCAGGATAAGGGCGAGCAACTGCCAGAATCATAGGTTTCCTAGGGTTTGTAAAGAACCGCATTATCTCGGACCAAATAGATGGATCTTCAGAGGCTGGGGATGGACCGTCTTCCTCACCATCCATATCGAAGTCATGAATCATATGGCCAAATTCAACACCTGGGGGAATGATAACCATACGAGGCATATAGCGACCATAGCAGTTAGCACCACGCTTGACTCTTGCACGGAGTTTCCTTGCAAGTATGACCTCAAAACCGTCATACAAATTCCATTGCTCTTCTATCTCTTGCCTAGTGCTTGCTATAACTATTTCAGATGCATCAAGAGCCAACTCCTCTGCCTCAATTCTACACATTATTTTGTATGTCATGTTTATTTGCTCCCTTGTCTGTCTCCCTTGCTTGAGAAGCTCTTCCAACTTATCTTTCCCAAGAAAATGCCCTGTAAAGACCATGGGAACATTAAGTGCTCCTGACAGTAGAGCAGCAGCAACTCCTGCACTAGCATAATGACCATGAATCACAGCAGGCCACGCCGGATGCCCACAGCTGATTTCTTCACCTATGGCCCTTGACATCTTCACTATATGACTGAGGGCGCCATCAACAAATTCTTGAATGAAAGGCCAGAGATGTTCCTTAGCTAGATATTTGTCTTTTGGTCCAAATGGTATTCGGATGATATATGCACCACTATTCTCTCCTCTTTCCTGCTTAAAATTCTTGAAGCTTGTTGATGCCAAAGGTTCCACTGGTTCACCATAGCTACGATCAAAATTTGGCGCTAAGATCTGTCTTGTAAAAAGATCAACCCGGTAAACTCCAGGACATGAGCTCAATGCTTTAGCAAGTTCCACAACATACTTGACCTGTCCGCCAGTATCTGAATCACGGCCAAGCTCCATGTTCTCACCACGGACCAGGCCATGAAGGCTGATCAACACTATGTACAGCTTGTCAACTGAACTGATCCTAGGTGTGTTCCCAGTTGTGCTGTCACCATAGGCAACAGAAGGATCACCAGCATCCTCTCCCTTCTCACCTTCAAAGAGATCTTCCGACATATCTGAAGTAGTCTCAACCCGTGGCCTCTCTGTCTCTAGACGGCGTTTCAACAAGCGATTGGCTTCCTCCTTCTCCAACTCCTTCTTCTTCCTGGCGAGGTTCCAGATCCTCCACGTCATGTTCTCCAGCCTCGTGTTCTTCTCCTGCGGGCTCCGCATCGCGTTCGCGCGGAGCCATGTCTTGTAGAGGTCGGTCTCGTCGTAGCCGGTGATGACCTCCTCGACGAAGTACCGCGCGGGGGAGAAGTGGCCGCGCTCGCGGAGGAGGAGCGAGGGGCGGTCCCCCGCTCCGCCTCCCCCACCCACCGCCGAGGCCGAGGCCGAGGCGGCGGCGCCCTTGCCGGCGTCGAGGATGGCATCCAGGTAGCTGTTGATCCAGTTGTCGTTGCCGTACATCGCGCCCGCCCGCGCGCGCGGGGGCCCCCCCGCCGGCGGCGAGGCGGAGGCGGTTGCTGCCGCTGCCGCCGCCGCCGGCGAAATCGAGAGGAGGCGAGGCGACGAGGGGTGGGCGTGGGCGTGTGTGTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0354300.1 | 6 | 26247703 | T | A |
| Osa06LNT0354300.1 | 6 | 26243244 | C | T |
| Osa06LNT0354300.1 | 6 | 26244800 | T | C |
| Osa06LNT0354300.1 | 6 | 26245612 | T | C |
| Osa06LNT0354300.1 | 6 | 26245959 | A | G |
| Osa06LNT0354300.1 | 6 | 26246920 | G | A |
| Osa06LNT0354300.1 | 6 | 26249150 | T | G |
| Osa06LNT0354300.1 | 6 | 26249504 | G | A |
| Osa06LNT0354300.1 | 6 | 26242598 | T | C |
| Osa06LNT0354300.1 | 6 | 26249958 | T | A |
| Osa06LNT0354300.1 | 6 | 26242130 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0354300.1 | osa-miR5541 | Cleavage | 3.5 | 15.89 | 1 | 21 |
| Osa06LNT0354300.1 | osa-miR812s | Cleavage | 4.5 | 23.303 | 1 | 24 |
| Osa06LNT0354300.1 | osa-miR5815 | Translation | 5.0 | 14.423 | 1 | 24 |
| Osa06LNT0354300.1 | osa-miR1425-3p | Translation | 4.5 | 18.295 | 1 | 21 |
| Osa06LNT0354300.1 | osa-miR1430 | Cleavage | 4.5 | 19.699 | 1 | 21 |
| Osa06LNT0354300.1 | osa-miR5490 | Cleavage | 5.0 | 16.558 | 1 | 21 |
| Osa06LNT0354300.1 | osa-miR5498 | Translation | 4.5 | 17.952 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0354300.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354300.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354300.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0354300.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0354300.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0354300.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0354300.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)