© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0354500.1
CTTTGCCTTCTGGAGCTCATCCTCTCTCCTTGCATCATATATCCTAGCTTCAATTAGTCTCTGTTCTTGTCTCTCTCGTTGCTCCTCAAAAGCTCTCCAGGATTCACTACTTTCCATTATTCCTTTGCTTCTTTTTCCCACCAGACCCCACCCCCTATCATGTGAGGAATTGATCTGAATAGGTTGTCCAGAAAAACCATTATCATCCTCTCTGTCTCTCTTCTCAAAGCTTGACAATTCAACAATTTTCCTTGTCTTTCTGGGCTCCTGACCACTCCTAAGTTCAGTAGGTCTTTGCTGATCTCCAAGCACCTTGGGCTGCTTGATAATAATTTTCTTACGAGGTAGATCCTTCTCCACTTCAGCAGGAGGCCTTATTACAACAGATGGCTTAGGAGTATCAGGAGGATAATCATCATATTTTATCTTGTTAGATATTTTAATCTTATTAACCTTTCCAGTTGATTTCGAATCTGTAGCATCCATCATACGTTTATCAGAAACCAAAGAAGCTGAGATTGACATGTTCCTATCCAATGACTTCTCAGGTGCTCCACATTTGAATTTTACAGGGACAGGTTTAGCCTTTTCAATACTTTCAGGTCCTTCAGTTTCAAAAGCTTCAGACGAAACTTTTGCTACCAACCTCTTGTTTGATGTTTTTATTTGAGCATTACTCACAATATCAGGAGGATGAGACCTGATGGAATTGACATCCATTTCGGATGTTTCAGGGTCCTCCCCGTACTTGGGGCACAGTTTGTTGGTCCGCATGTGCCCGAGCTGACCACAAGCTCCACATACAAGAGTGTCTCCCCTTGCACCCTGTCTCTTTTCCTTGAACCCATCCTTTCCTGGGATATTTTTCCTTTTTACTAGAATAATATCATCATTTGCATCAAATCCTGTCTTTGTTCTTAGTTTTGAGGGTAAACTTCCTTCAGCAAAATTTTCAACCTCCTTGGCTTCTCTTGGTATGCTCTCTTTTGGGGTTAATGCACCGGCATATACAGACGATTTAATCATTTGGCCAGCCTTACCCTGCTTCATTTTATTGCCCTGATTATACATAGGAGTGCTATAATTTGTAGTTTCCACAGGCTGCTTCTTCCTCTTCATATCACTATCACTCTCTTCAAGCAGTTTTTCTACTAGAGCAGCCTCTGCTACATCATCTTGAATTTCCTCATTAATTTGGGATTGAGTATGACACCTTCTCATTTTAAGCCCTCTCATTCCATCCATTTTATCGCTTCTTATGTCTGTATTACCAACATCTTCATCATCAAATTCTTCTGCGTCTAGCAAATTTTCAAGATCCCCAGCAAATGAGTCAAGATCACTGTTAGCTTCTGTGTCACTGCCATTTTCATTGCCGTCCATAGCTGAAAGTGACTGAATTTGTCTGTCCCAAATTTCCTGACATTTCTCTTTAGTTTGCTGCTGAAGCTGCAGAAAAGACATCCTTTGTCCCCGTGCAAACTTACTAACTGGAATTTCATCCATTGTAACACCCGATGCAGCTTGTTCACTTGAAAGCTTCCTCACCATCGCGATCCGATGCCACCTTGTTAACTTGTCAATTTGCTCTTCTGGAACGCCAAATTTGAGTAGCAACTCTCGAGCTGCATCCATGCTCAACCTGCGGAGATCAGCATCTGTTCCAGTCACAGTGGTGCCTTTTGCAGCAGCTGACTTCTTCTTATGTGTTGAATTGGATACAGGTGCTTTTGGAGTTACTCGTACATAGCTAAATCCTAGCCCACGGCCAGATGGATCACCAACACCAGTAATTTCTAATCTCTCTATATTTTCCTTGTCCTGGTTTGTACAAGCAACAAAATTGCTGGTAAGATTCCAGCTAGTGATTTGCAATTCCCTCTCAATATGAGCTGCAGCAGCAAGCTCAATAGCTTCATCAGGAAGCTGATTCATGGCAGATGCAAGTCCCACAGGCTGAGTAAGCTTCTCAATTCCTAAGTGCTTGAGACGATACTGGCCAGCTTGCATACTCTCATAACAGCAGACATTTTCAGGTGTCAATAATCTTCTCAGTTCTTCCTCCGATGGAATCCGAAAATCAGGTCTCTGAATATAGAACAAATGTCCCTTTGGTCCTTTCTGTAAAAATCAATGAAGGACAGCATTAATTTTGGTTAAACCAAACACCCAACATCGAAAGTCAAAGCACCAGAGAAACAGAAGGAGCTACAAGAGTAATAATAACATGAGTGATAGATTTTAACCCTTAAATCCGCGCAATGCTTTAACCGTTTCCTCACAATAGCCTCTGTTATAGGAGGCTGAATAGGTAATTCATCAGCTCGAATCTGAGGAATAATACCAGGCTTCTCCCTAGCACGGAACTCACGATATACATACACAAGAATCCGATTCAGAATATAATTCTGCATATTTTTTGTCCCAGGTGAAAATACTTCCATATGAGGTTCCTGTTGGCCAACAGCATACAACTTGTCAATGCGACGAAGAGAAAGCATCCCTTTGGGTGAACGAACTAAAAGATAATCTGTCGTCGCAACCTTATGAGGAAATACAGGTGCTCTGTACATATTTGTCTCAAGACATGATTGGTGGGAGCCAGAACGAATGTTCCCCAGAAAAGGAGATTTGTCAGCGGGATCAATAGCAAGCATTGTACCCAGTCCATCACTGTTGCTTCGCAGGGATGTAGCTGTTTGGTCAGAAGGTGAAGTCTTCTGGTAATACGTGCACAGTCGTGCAGCCATTCCTGCATTTGCAAGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0354500.1 | 6 | 26361921 | T | C |
| Osa06LNT0354500.1 | 6 | 26363998 | A | G |
| Osa06LNT0354500.1 | 6 | 26365069 | G | A |
| Osa06LNT0354500.1 | 6 | 26365226 | A | T |
| Osa06LNT0354500.1 | 6 | 26365318 | G | A |
| Osa06LNT0354500.1 | 6 | 26365703 | C | T |
| Osa06LNT0354500.1 | 6 | 26362508 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0354500.1 | osa-miR5820 | Cleavage | 4.5 | 4.241 | 1 | 21 |
| Osa06LNT0354500.1 | osa-miR5820 | Translation | 5.0 | 16.853 | 1 | 21 |
| Osa06LNT0354500.1 | osa-miR5825 | Cleavage | 5.0 | 13.911 | 1 | 24 |
| Osa06LNT0354500.1 | osa-miR6255 | Translation | 4.5 | 3.085 | 1 | 22 |
| Osa06LNT0354500.1 | osa-miR818f | Cleavage | 4.0 | 21.499 | 1 | 21 |
| Osa06LNT0354500.1 | osa-miR399k | Cleavage | 4.5 | 15.508 | 1 | 21 |
| Osa06LNT0354500.1 | osa-miR1865-5p | Translation | 4.5 | 13.669 | 1 | 24 |
| Osa06LNT0354500.1 | osa-miR2101-5p | Cleavage | 5.0 | 12.618 | 1 | 22 |
| Osa06LNT0354500.1 | osa-miR2118o | Translation | 3.5 | 16.865 | 1 | 22 |
| Osa06LNT0354500.1 | osa-miR2871a-3p | Cleavage | 4.5 | 11.079 | 1 | 21 |
| Osa06LNT0354500.1 | osa-miR2871b | Cleavage | 4.5 | 11.079 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0354500.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0354500.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0354500.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0354500.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354500.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354500.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0354500.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)