© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0354700.1
ACAACCGTTCATTCCAGCGTGCACCACTGGCAATGCCTGCTGATTTCATCATGTGGCATTAGCAACAACAATTTGTCAGAAAACTGGTTGCATATCATGGAGCAAAACCTCCAAATTTAGCCACAAAATTCCCTCCCCAGAAAAAGAAACAATTAGCCAAAGCTAACGAGGGACTAACAGATGATGTTGAAGTTACATCCGTAATAAGCTGAAGCCGAAGATTCGCAAAGCAATTCACACAAGTCGATGGGTTCGTCCCTGGGGCCATTACCAACAAACATTTTGCCAAGACTTCGTGCTTATTAAGGCGCCTGCTGGTAAAACTGTAAAGAACAAATACCATTGGGGCAAAGCATGGATGAAAACAAAGGAAATGACTTGAATGGCTCAGATTAACCCGATTGCCAATTCCAAACAGTTTAATGTGCCTGTGGCTCCGGCAAAATGTAAATACTCCCTCCGTCTCTCTGTACATGAACAAATGAGTAGATTAGCATGTACTATCAAGAAATGGCTGCAAGCCTGCAACTGGTACCTTGCTGGGCAGCAAGGCCTCCTAGTATGACAGCTAACTGAACATACTGCTAATGAACCAACAAGATATTTATTTTAGATAATGGATTAAAACATGGCCTCTACATCCAAGACTGATGTACATGGCCAAGAACGAGAAGATGTCAAATCTTCAAGGGGTAGCCAAATCATCACAACCATTCAAGAACTAAAGAAGTAACAAACAGCGAGAAGATGTCAAATCATCTTCAAGGGGTAGCCAAATCATCACAGCCATTCAAGAACTAAAGAAGTAACAAACATCAAAATATGGATGAACAGGAGTATATCCTTAAAGTATGAAAGGACAATAATAATGATCACACTACAGCTAAGTTAATAAATAGTCAACATTCCATTCCTTAAGAAAAAAAGGAATGAATAAACTACATAGAAATGAAGAGATATTTAACTATTTACAAGTGGCAATTAAGGATTTGCTACTGGATCCACAATGTCTGTCATAGATTGTGAGTAACAAATTCTTAATTGCCACATCTTAAAAGTGGCAAAAAGTTAAATGCCTCAGCAAAAGCAAAACTTGAAAGAGTTCCAACATCTCGCATATGCTACTGTATATGAACAGGGCGACATGCAAATGACAACTGAGTGGCCTAAATGGAAGTCAAAATGAGATCAACGAATCTAAAAAAAAATTGTTTGTATAGTAATATTAATTTCTCACCAAACAGAAACAATACCAGAATACCAGACTCAGATCATTACAAGCACAGCCATAAGAAAGTAAGGAGGTAAAACATGGTTGAAAACAAAGGAAATATACTTGAATGGCTCAGATTAGCCCAACTGTCAATTCCCAATTGTTACAAATGCCTATGGTTCTGGGCAACATGTTGATAGTACTCCCTCCGTAACTCCGTACATGAACAAATGAGTAGAATCATTCGTTACATCATGTACAGACAAGAAATAGCTGCAACTGGTAACTTGCTGGGGAGCAAGGCCACCTAGTATGACAGCTAGCTGAACATATTACCAAGGAACCAAGAAGATACCAGATGATCTCGAGGGGGCAGCCAAATCATCACAGCCATTCAAGAAAACCAGGCTATCGAAATCGCAAAAAATCCATTAGAAAATTTAATAGCAACTTTAAGTTAGGATCATGATTAGGAATCATTTTGTCATGCGAGCTAACCAATAAAATTTTATTGATGCATCTATAGTCTCGTGAGTCGACAATGGGGAATGGTTTTAGAAAAATGAAGTTCTCTTTTAGAATTCTGTTGTAACGCACGAGCATTTAGCTAGTACTATTAAACTTGCTCTAAGCAGAGTACATACGTACTCATGCAGTCAGAGAGAGGGAGAAGAGGAATGGCAATGTGCAACAAAATGGCAACTAAATAGTGAAAAATCCAACAACGGCAGGTCAGATTTCGCATTGCTCGGTAATCCCAGGCAGGAAGCCAATGCGGATATAATTGCAGAGTCCCCAACACCCACTGCCACAGGCACCACCGGCATTTGTGGCTGCCAAAGTCGATGGCCTCCACACCAATGCTGCTCAGCGCACGCTAGGTGGCGGGTAATGGCCCCGAGAAGCTGAAATCTGAGGTGGCCACCGCTGCTCGGGAGAGGCACCCTAGCCAAACGGCCTCATTCCTCATCACCGTGGGGAATTTAACTATTTGCAACTCTTCAAAGAAGCCGCGGTTTTGAGCGAATGTGATCATCACCAACTGCTAGAGGGAGAGAATGGCTGATGTAGCACTTCACCTCGCGGCTCGCTGAGCATGGGATTCAGTTGACCCCAAGTTTTTCGGGGAATAAACTCTGTTATTAGTAGATTTGAATGGCTCAGATTAACCCGGCTGTCAATTCCCAACAGTTACAAATGCCTATGGTTCCGGCAACATGTAATAGTACTCCATCCGTCACTCTGCACATGAACAAATGAGTAGAATCATTCATTATAGCATGTACTGACAAGAAACAGCTCAACCGGTAACTTGCTGGGGAGCAACCGAGCAAGGCCTCCTAGTATGACAGCTAGCTGAACATATCACCAAGGAACCGAGAAGATACCAAACGATCTCCAAAGGGCACGCAAATCATCACAGCTATTCAAGAAATAAAAAATAACAAACAACGAAATTTGGATGCACAGAAGTATGTTCTGAAAGTATGAAACAATGAAAATAATGATCACACTACAACTACCAAACAAACAATTAACATTCCTTGAGATAAAAGTTATGAATAGACTACATACAACGAAACATACAAACTTGAAAACCAGGCTATCACTCACAGGGCAACTGCATAACATAGTAATTAATCAAACCGAAGGAAGATGCCACTGCTTTGGACCATAGCATCACACACACTTTAGTGTTCCATAACATAACTAAATATAAGCTAAGGTAGCATCTACCTTGTGAACAAAATTGAGTACCTGGTCACCGCCATGGTGTCATTTATTAGGCATAAGAACAGGATAATGAACAAATTTGCAAATATATGTGAGAAGAAAAGCAATTCAGCACACCAGAAATGTCTGCTCTAGAGAAAAGCAAAAAATAAACATGCAGAGGTACACAAACAGAAACTTGAAGAACCAACAAAAACATGCTTCAAATAGCAAGTTCCTGAAATGAGCTCAAATAAATGAATGGCATATGTGCACAATTTTTTTCCTAATCAAAATATACAAAAATAAAAGGGCAAAATCTTGAGAGCTACTGTTACGATAGTAGTAGGTAGTAACTGGTTACTGACAGAAATAAGTGAAATGGGCAGTAAGATTCAATTAAATAAATGAATGGAGTACTCAGATTTTGCCTCTGGCCATTCAAATAAGCCAAAATTGAAGAACCCATGAAATAACCTTGCCAACCCACACAATAGCAAGTGCTGCTACAGAACTAAAGCACTCAACTCAACAATCACCGCAATGGAGTTCTGATGTGCATTTCCAGTAGCATCTAAGATCCAACCATTTGTCTACTATTCAATCAACCAAATATGCTATGGGGTATTTCACTTTTCTTGCACCCAATCTTCTGTCTGTATGCATGGAAAGGTAAATTCTGAAAATGGAAAGTCCCAGTGTTAGCTAAGATCACAAATAGGTAACATAATTCCTAACATTTGATATCATAAGAGGTATATCGGATAAGTGATGTGTTGTGGTTATCCCATTTCAGCTTCATATTCTGTCTCTTGACACTACACTACATCAACCAACTTCCTATCCTACAGATAAATATAGGGGATGCAAAAAGAGTTGAAAACTTTTAATACTCCCTCCGTTTTCAAATAATTGTCACAATTGACTTTCTCCATCCAAACTCTAATCGTAGATGGGTCTTATTAATACATATACAAAGCCTTGTGAACATACAATTAATAAAGTGCTATTCTTAGATAACGTAACTAAATATTTTCAAAATTATTATTTGTGAAAGTTTGAAGGTGTCAAGCCAATGGCAACAATTATTTGAAAACGGATGGAGCAATTAACAGTAACCATACCATTGTCATCCCATGCAACTTTCCGCGTTCAAATGGCTGCCTGCAAAATCAAACTATCCGATTTTCGGAGAGGGAGACTGGGAGGTATGGGTGTACACCCCCACCACCCACGTCAAGTCGTCTTCAACTCTATCCTATCATCAAATGTTTCTTCCCTATTAAAATGATACTAAGTTCTTCATTGGCATCCTTCAATAATTGATAGTGTGTTGTGCACAGCAGCTTCAAAATGATAAATCAGTTCGATTGATGTTCATCCTGCTGAGTGTGCCTCTTAATGAGTCAAATTCATCATTTCCAGCAGAAGGGCAAGTAGGAAAAAGTAATACAAAAAAGTGCTAAGAGAATTGATGAATATATCCACTCCAGGTGAAAGCTGGGAGTTGGAGGACAAAACAACGGAATAGGCTAGAAACAGAAAAAAAAGAAGCAAGCACATGTTTATAGAGGCTACAAAAAGGATAGATACTGCAGATTATGCTGAATGTCCCCTGAATAAAGTAAAAGTACATGGTTAAAAACAAAGGAAATGTACTTGAATGGCTAAGATTAACCAAACCATCAATTCCCAAACAGTTGCAAATGCCTTCGTTCTGGCAACATGTATTTACTCCCTCCGTCCTCTCTAAATCAACAAATGAGTAGAATCATTCATTATAGCATGTACAAACAACAAATAGCTGCAACTGGTAACTTGCAGGGGAGCAAGGCCTCCTAGTGTGACAGCTAACTGAACATATTACCTAGTAACCAAGAAGACACCAAACGATCTCCAAGGAGCAGGCAAATCATCAGAAACTAAAGAAAAGAACAACAAACAATAAAATATGGTTGCACAAAAGTATGTTGTGTTGTGGAAGTATGAAAAAACAAGCTAACTGAACAAACAGTTAACATTCCTTTACCTGAGAAAACTCATGAATAGACGACATAGAAACAAAATATAGACTTGAAAACAAGGCTAGTACTCATCACAGCAAATGCATAACAGAGTATTTACATCAAATAGAATACGATGCAACTGCTTTGGTCCATAACATCACAAATTGCATTGTTCCATGAAATTATTGAACATCACAAAATTGAGAACCATGTCACTGGGCATGGTGAATTTACCAGGTAAAAGCTGAACGGAATGCTGAACTAGTTTGCACATATATGTGAAAAGTAAAGGAACTATAGCCAACGTGTAAACTCTCACATGCTTGAGGAACTTTCCCACACATCCAGCAAGAATGGATGGCAAGCATACCAAACCAAATAAAAAATTGCAACTGATTCTGAAACAGGAAAAAACTATCATGCGGCAGCTCAGATCTCACATCGCTGCCTGAAAAATCAACCCACCAAAAAAACCGCCACATATATGACTGAACCCCATAAAACCATTCGTCCGTTTTCCTCTCAATCCCGTTGCAAAGCACGGGCACAGCACTAGTATTCCAAATGTATTGAGTTCACCTCCCTCTGCATGATCACAGAATGAGATTGTTCATGAGAAAACCACCTCCACTGCCACCGCTAGCACGCAATATGGTAACTTGCTGCAAAGCAAGCCTCCTAGTTGGAGGCTAGCCGATCAATTGAACAAAGAACCAACTCAGGAGGTGTTAATAGATCTCCCAACACCAAAGGGCCAAAAATTCATCACAGCCGAGCAATAAAAAAAAAGTAGTGTTTTTCTCAAAATTAGTTTGGAACAAACATTGCAAGCAACCAAAGAAACTGTTAGTCTTCACTTCTCTGTGAGCTGCCTTGGAAAAGGTTTAACATCATCATCATCATTGCATTCCGTCGGAACAAGTCCGGGTCCATTGTAACAGGGAAGTGAAGAAGAAAATGCTGGCATAGAAACACAGTTCACAGAGAGAAAGTAACCAGGGCTCCTTTGGAACACAGGATTTTCCCAGGAATTAGTTCAACAACCATGTAAATCCTCCACTCTATAGGAGGCCCAAGTAGGCTCAGATTCGCCTTTACTCAGTCATACAGACCCAACCGCCACATATCTTGCACCACAATCTACGCATCGTAATGTAAGTGGATTTGCCCTGGCTATCATTAACAGAATGACCATCCTAGTTGCAAGAACCACCTAACATTAGTGAGTGGATAGGTTGCCAGAGATGATAGGACCAGGTCCAATTGACACCCACAGCTGCCTTGATTGTTCAATGGCAGGATTGTCAGAAAAGGTTGATCATCATTGCCCTTCTTCCACTAACCATTTCATGTTTCCAAAATTCTAGACACAGATGATAAAACCATACATATATACTCCCACCGTTCCAAAATACAAGCAGAATAACTAAGTGCGTACGTACTGCCAACGAGATCAGCTCGCAAGCTCTCTCTGCGGCGAGGAGAGTGAGGAAGAGGAGGAATGGCAGTGTAGAGTAAAATGGCGACCAAATAGTTTAAAATCCATCAATTGGGAAGGAAACTGACAAGGAATAAGTTCACTTTAGGTCCCTCAACTAATGTAAATGGATCTGCCCTGGTTATCATTTATCGGAATGACCATCCTAGGCACAAGAACCACCTAACATTAGCAGGTGAATAGGTTACAGAATGGCCAATTTGGTTTACGGTTTGGAGTTTGCATGTACTGAACTGTAACCATACATATATATATGCATACATACATGCCCACAAGATCAGACTCGTGAGCTTTCTCACGTGAGGTTGCACGGAGACGGAGGAGGGAGGGGAGAGAAGGGATGGCAATGTACACATTCATGACCAAATTGTGAAAAATCCATCAATGGCAGCTCAGATTTCACGTTGCCCAACTAACCCGGAGGCAGAAAGCCAACGCGGATACAGCCTCAACAGTCCCCACCCCTTCTGCCACAGGCACCTCAACA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0354700.1 | 6 | 26471965 | C | T |
| Osa06LNT0354700.1 | 6 | 26472370 | C | G |
| Osa06LNT0354700.1 | 6 | 26473351 | A | G |
| Osa06LNT0354700.1 | 6 | 26474013 | G | A |
| Osa06LNT0354700.1 | 6 | 26474016 | A | G |
| Osa06LNT0354700.1 | 6 | 26474095 | T | A |
| Osa06LNT0354700.1 | 6 | 26474121 | G | A |
| Osa06LNT0354700.1 | 6 | 26474863 | C | G |
| Osa06LNT0354700.1 | 6 | 26476741 | T | C |
| Osa06LNT0354700.1 | 6 | 26477019 | T | C |
| Osa06LNT0354700.1 | 6 | 26477401 | A | G |
| Osa06LNT0354700.1 | 6 | 26477667 | A | T |
| Osa06LNT0354700.1 | 6 | 26478237 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0354700.1 | osa-miR5537 | Cleavage | 4.5 | 7.342 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR5808 | Cleavage | 4.5 | 13.377 | 1 | 24 |
| Osa06LNT0354700.1 | osa-miR5815 | Translation | 4.5 | 9.883 | 1 | 24 |
| Osa06LNT0354700.1 | osa-miR5179 | Cleavage | 4.0 | 17.641 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR5833 | Cleavage | 4.0 | 12.545 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR5835 | Cleavage | 4.5 | 13.849 | 1 | 24 |
| Osa06LNT0354700.1 | osa-miR1440b | Translation | 4.0 | 12.071 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR6248 | Cleavage | 2.5 | 11.353 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR6252 | Translation | 4.5 | 8.623 | 1 | 23 |
| Osa06LNT0354700.1 | osa-miR6253 | Cleavage | 4.0 | 9.745 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR5079b | Translation | 4.0 | 8.758 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR394 | Cleavage | 4.5 | 16.88 | 1 | 20 |
| Osa06LNT0354700.1 | osa-miR395f | Cleavage | 4.0 | 15.604 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR396c-3p | Translation | 4.0 | 24.01 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR816 | Cleavage | 5.0 | 17.462 | 1 | 20 |
| Osa06LNT0354700.1 | osa-miR1439 | Cleavage | 2.0 | 8.893 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR1439 | Cleavage | 3.5 | 13.261 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR1853-5p | Cleavage | 5.0 | 15.04 | 1 | 24 |
| Osa06LNT0354700.1 | osa-miR1854-3p | Cleavage | 3.5 | 23.827 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR1854-3p | Translation | 4.5 | 19.243 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR1870-3p | Translation | 3.5 | 12.492 | 1 | 24 |
| Osa06LNT0354700.1 | osa-miR2092-5p | Translation | 4.0 | 21.168 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR2863b | Cleavage | 5.0 | 14.523 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR2920 | Cleavage | 5.0 | 17.023 | 1 | 23 |
| Osa06LNT0354700.1 | osa-miR2921 | Translation | 3.0 | 6.798 | 1 | 24 |
| Osa06LNT0354700.1 | osa-miR2921 | Cleavage | 4.5 | 7.643 | 1 | 24 |
| Osa06LNT0354700.1 | osa-miR5079a | Translation | 4.0 | 8.758 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR5149 | Cleavage | 3.0 | 8.794 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR5149 | Cleavage | 4.5 | 14.831 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR5149 | Cleavage | 4.5 | 14.686 | 1 | 22 |
| Osa06LNT0354700.1 | osa-miR5490 | Cleavage | 4.0 | 12.525 | 1 | 21 |
| Osa06LNT0354700.1 | osa-miR5508 | Cleavage | 5.0 | 10.306 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0354700.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354700.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354700.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0354700.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0354700.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0354700.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0354700.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)