© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0032800.1
GCAGATCAACGGTGACTTTAACTAAATATAAAAAGGAGGTAGTACAATAGAAAACCAAACAGCTTGAGATTTCTGTTACTATCCACAAAAGGACCCCTTTTTTCCTAGCCAAACGTTTTCCGTGGGATGCAACCCTCGACTGTCAACCCTGCCTATCCTGTGGGCAAAACTACACGTGAAAAATGAACCAATTCAGGAAAGATTGGCTCATTTCGTGCTGTGATGAAACACACAAAAAAGGGTGGTTTATTGATGCCTTCTCTGCATGGTCACTCTCGCGAGCAAGTCCAACCGTCCGAGGGATGAGATTTACCCCACTGCCCCCAGCAAAAATTGGAGTAGAACTACTCCACTAGATGATACCTGGAGGGCTCCGTTGGCTTCTCACTGAACACTCTCTCCCTAGCATTTTCAGCCATCTTTTGCCAGTTGGTGAAAAATGTGATAGCAGATAGAAGGGTGATCTGTGATATTGAACCACAGACAATGCCCATCCAAAGTCCTTTTGCTCCCATATGTAGCACAAAGCCAAGAAGGATCGCCATTGGAATTCCGAGCAAATAGAATGAGCCGAGGTTGACGTACGCGCCCAAATGTTGCCATCCACAACCTCGAGCAATACCTGACATAACTCCTTGTAGACCATCAGTAACCACAGTGATGCAAACCAATGGAACCATCATCGCGACGAAAGAGATGACCTCCTCCTCACTGCTGTATGCACGACCCAGGAGTCGCCGTGATGCTAACAGAGTTCCACATACTATAAGTGCCTCTGTCACTGCAACTGACAGCACAACATAGACAGCTGAACGAGCTCCTTCAGGGTTCCCAGCACCCAGTTCGTTTGCTACTCGTGTGCTTCCACCAGCTCCAAGCCCATAAGGAATGGTAAAAAGTAAAGTTATACTTGTGAGACAAATTGAAAGCACTGAGGTTTGTAGCTCGGGGTTGGGTAAAAGTCCTGACATAAGAATAAGTAGCTCAAATGACCACCACTCAAGACAAATCATAAGCGCAGATGGCAATGCTAGACGTAAGAACCCATCCAATCCCTTGAAGGCCTCGATTGTTGGAGGTGTGCGTGTTTCCTTGCAAGAGCTTGACAGCAAGATATAAGCCACAAGCATGGCCACATTCAACCAGTATGATATGCTTATCGACAAGGCAGCTCCAGTATACCCCAAGCCGGTCTTAAACACCATCAACCAGCACAGAGGGATGTGGAACACCAGGGTTGCAACGGATGCAACGAGCATGGGCATTATCAAGCTCTGGGACTGAAGGAACTTCGTGATAGGCTGAATCAACGCGTTTGCGAAAAGCCCTGGAATCAGCCAGACGATGTATCTCCCAGCTCCATGCGAGATCAAAGGATCTTGACCAATGAGTACCAGGATTTTGCCCATGAAAACCCATAGAAGTGATAGAGGAATGCACACCACCAGAAGAGTGAGTATGGCTCTGTAGGTGTGCACTCCCAGAGTATGGTATTGTTTTGCCCCATAAGCTTGGCCACAGAGAGTTTCCAGTGCACTTGCCATTCCAATCTGCATTTACAAATGATGTTAGCTGTATCAGGTGAAATCAGAATCGTTTCTTTTCTCGCAACCAAAGAGAGGGGTAAACTAGAGTTGTACTGCGTCAGTAAGTTTTCAGTTCAGATGCACAATACAATCAGCACTGCTTTATGACTTACAAAAATAATTGTACTTGACTAGTTTACCGACCAAAGTAAACTCAATTTAACGGGATCTCGATATCAGTTTCTTCTTTGCATGATGTGACTCAGCGACTAAACAAGTCGAAGAGACACTAATGACATGCGAGTAGCCTGGTCGTACCACAGTATTGTACTCTTATCCAATGCAAAGCACGCTTGGACTAACAACCATTTCTACCCGAAAGACAACAAACTTTAAGCTGAGGCCAGCAGACATTTTGGACGATTATTCCTCAAAGATAACTCATCTTAGAGTCCTACTAATATACAATTCCTGCAGAGTGGCTGTCGCTAGCGAACCAGTTGGAATAAGTAAATACTTAGACCAATTGAGCCCCTACACCAATCGGAAATCAGGAGGAAGCCACTAGATCAGTATCACGTGTTCGACCGTAAAATACTCCGAAAATCACATGGCTTTCACGCTAGAAAGCTGCACCAGGGAAGCTGGACACTGACCGATGCTAAAAACAATGGGAAAAAGGAAACTCGTGAATCTCTTCCGTTTTCTTGGTTTCTTTTTTGTTCAAGATCATCCTGGAACAGTTAACTAACCAAGAACAAATTAAGCACAAATCTTGCATGCCCAAATAATCGAACTCATTTCTCCCAGAGGCTCCCAGTATCGCTCAATCCAACAGTGAGGACATGCAAGTATACATGCAGCCAGCGAAAGCAAGATAATACTAATAGTAATGTTTGCAAATTAAGGCAGCAATCAAAAATGAAAAGCTGGGGGGAGTAATTTGGGGGGTTGTACGGACGAGGAGGCTGAAGCCGGTGACGGAGGCGAGGGAGGTGGCGATGGCGGCGGAGGAGAGCGGGAGGACGCCGGGGAGGTGGCCGACCATCATGTTGGAGAACACCTGCACCGCGTAGTTCGTCAGGCTCACCGCCACCATCGGCAGCGCCAGGTACGCCAGCTTCCCGGCCTCGCTCCCCCACCTCCTCCTCCACCCAACCTCCTCACCCTCCTCCTCCCCCTCCTCCCGCCGCAGCAGCAGCGGCTGCTCCTCCCTCGCGGCCGCGGCCATCGCTTCCTCTCCCTCTCCGGCCGCGTGCGGCGGCGCGTGCTCGCGTGGGCCTTGGCGGCGGTGTCGCCGTTGTTGCGTGCGCGGGGGCGGAGCAGTGGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0032800.1 | 1 | 28235210 | T | C |
| Osa01LNT0032800.1 | 1 | 28237292 | T | A |
| Osa01LNT0032800.1 | 1 | 28237594 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0032800.1 | osa-miR5810 | Cleavage | 4.0 | 14.982 | 1 | 24 |
| Osa01LNT0032800.1 | osa-miR5821 | Cleavage | 4.5 | 15.22 | 1 | 21 |
| Osa01LNT0032800.1 | osa-miR5179 | Translation | 5.0 | 19.906 | 1 | 21 |
| Osa01LNT0032800.1 | osa-miR160a-3p | Cleavage | 5.0 | 20.043 | 1 | 21 |
| Osa01LNT0032800.1 | osa-miR160b-3p | Cleavage | 5.0 | 20.043 | 1 | 21 |
| Osa01LNT0032800.1 | osa-miR415 | Cleavage | 4.5 | 21.637 | 1 | 21 |
| Osa01LNT0032800.1 | osa-miR1430 | Cleavage | 4.0 | 16.128 | 1 | 21 |
| Osa01LNT0032800.1 | osa-miR1430 | Translation | 4.5 | 20.556 | 1 | 21 |
| Osa01LNT0032800.1 | osa-miR1865-5p | Cleavage | 4.0 | 23.754 | 1 | 24 |
| Osa01LNT0032800.1 | osa-miR2055 | Translation | 4.5 | 20.963 | 1 | 21 |
| Osa01LNT0032800.1 | osa-miR2864.2 | Cleavage | 3.0 | 14.235 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0032800.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0032800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0032800.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0032800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0032800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0032800.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0032800.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)