© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0032900.1
CTAGTGAAAAATACGTTGAAAAGCTAGTGCCATTTATTTACACAGTAGTATAGAAGGTGGAAAACAAAGGCGTTTGCTTGCTACTATTCTGCATCTGTACATCTACAAAAACACTGTAAAGCGGGGTCGGATCAGCTCTGGCTTAGTGACTTGTGTCCTGGCCATCGCTGCTGACCTCCATCTTCCGGGTCTGAGCTTTGAACAAGCTAGCAACATCAGTAGCCGTGCTACAATCCTCTGGACTCCGATCTGGACGAGAGCGTATGTACCTCGGCATCCTCACTGAGATCCCACGCGACGGATGGACCAGACCAATAGCCGCATGGTGAACAGGGGATAGCGTGAGGTCTGCACCTCGGATTTCCCAAACCTGTTCCGCAGAAAACCACAACTCCGGAAGCTCGTCTGTTTTGTAGTAAACAGGTTTCTTGGGCAGTATTCTGTCGCCAGAATAGAACTCCTTCATCTCTTTATAGAACTCATCTGAGAAACCAGACATAACGCGGCAGACACTTTGGAACTCTTCGTATTCAGGGTTGTAGCACGCCATAAGAAAAGGGCTATACCATCCAGCTTTCCGACCATTTCCATACCATGCACCAATTGGAACCAAGTCCAGGCTATCACCCAAGCCAACATAGTCACGCTTAACCTTTAACCATGAATCACAGCGCTTGGAAGCAGAATATCCAGCATCAACATCCAGTATTTTCAGCATAATACCCTCACAAGAAGACTGGCATGCCATTTTGAAAAAGGTGTTCATTCTCTCCAAAGTGGTAGAATTATCCACAGAAGCTTCATCTGCTTCTACAGTAAGTTGCTGAGCTAACTCAAAATGTCCTGGCTTCTCCTGGAACAAGTCGTGGATGTACTTTCTTCTTTGCCGAAGTGAGCAGTTCAATAGGCTTTGTCCATTGCAGAACATGATATCAAAAACAAACACACAAATGTCTACCTTTATGTTCTGAATTGCAATTGAGGAGTGCTTGCTCCCTCTCTCTCTTGAAGACAGCTCTTGGAATGACATCAGTTTGTTTCCTTTCTTCCTATCGATTCCCACAACCTCGGCGTCAAGTATAAAGCTGGATACTTCGATGCTGCACAGCTCTTTGATCATGCCAACCAGATCAGGAAATCGAGAGGTTGACTCTTTCATTTGCCTTGAAAATATTTGCACAGATCCATCATTTGATCTGTGAATCTGGGCTCGCTGACCATCATACTTGTACTCACAGGTAAATGCTCTACCATTAAACAATTTCAGTGATTGAGTCAACCCGTTAGTAATTCTTGCAAGCATAGGTGGGATAGGGGTGCCAGTTATCATTGCTAAGGACGAGGCTGAAAATGCAGTGTCTTCTCTCAGGAGAGAGGGAATAAGCAAATCAAGATTAGGAATGACATTGTATGCTTCAGCAACTTCAGTTGAAAGTTCCTGTAATTGTGGTTTTATGCCTTCCAAAGATAGCACAGGACTATTTGAATATTTTCCATCTATAACAACAGCATGTGCAAGTGCAGGTAAAATTGTCTTCATCATGACCCCAATACGCAAGTTACGGACCAGTGTTCTAACAAGAAATTTCATCTCCATTTCTCTGCAAGAACGGATAAGATGCAAGACAAGAATTTTTCTCCTTCCAGTACTCCCACTACCTGCTATCCCACTTAGTTTGCGAAGTGTGGAAAACACATCGCGAATTGAGAGGGGACGAGGAGGAGCAAGTAACATTTGATTCTGGCGGCATTCTTGGGCAACATCACCAAGATCGCCGAACGTTTTGTACATCTCATGTATTTTAGATCTGCTGGATCCTAATGCCTCCTCCAGAGCAGATACAACCAAACTCCCACCAATGTTTAGTTCAATATTTTCATGGTCAGGAGAAATTTTATTAGTACATAAATAAACAGCAGGTAGCACATCATCAGGTGATAAGGCAAGCAAACTTCGGAACATGTTGCAAAGCATGGCAGTAGTTTTGATCTTTCCCTTTTCTCTTTCAACCAGATCAAAAGTGCGAGCCAAATGTAAGTATGGTGCAGGCTGTCCTGCTGTCCAGCAAGCATGCTCGATCGGTAGATACTTTTCAATTGGCAATGATATACAGACTGAATCTGCTTGTGCCACATAAGATTGTACACATAAGTTCGGCATCTTTGGAGTGGCCTCAGAAGAGTTGCGAAGCAAGCCCGTACTACTAGATTTGTCTGTCATTTCATTTTCTGTGTTTTGTGTGACAATATTCATATCATTTTCAAGTACATTACTGTTGTCGGTTTTACTGTAAAATATATCAACTGCTACATTCACATCCCCTTTTGCCTTCTCAAGCAATGAAATTGCAGACTCTCTGGACATTCCACCATCGACAATCTGAAGAAGCTGGCTTACACTCTGCTTCTCTGACTCTACAACTTCAGTAAACTGGTCGTCATTCCTCACATTGTTTTGATTTGCGTCTACAGTTACTTTATCGGATGTATCGCTTTTAGAAGCAGCTAGCATGGTTCTAGCAAAATAGTTCGTAATTGTGGACTGTTTGCGCCCACTGGATTCTGTCAAGGGTTTAAAGGCAGTTGACCGCCCTTTCTTTTTTGGTTTGTCCGCAGAATTAGAGCCCCTCTTCCTTTCCCTTTTAGAAAGATTTGACTTCATTCTCATAGCGTTCAAATTCAGCAACTTACTAGAATGATCCATGGGCTTCTGTGAAAATAAAGGAACTTCTTGCTGACTACTTGCATCAGCAGAAGATCCATGATCAGAAGAGAGATCTATCTCTGACTTAGGCGTTTCACTATTATAAACATTTGCTTCCTCAAAGAAATCTCTTTCTTTCTCAAAAAAATCAGTTGCTGCTTGAACAACATCACCGCCTGACTTAATTAGCAAGTCCAGGATCAGGTCCTGGCTGACCCATGAGGGTAGGAAATCTGATAATTCTTTCTTCATTTCCACTGTAATCTTCTCTTGAAAACTATCTGATCGTTCAAAAGCCAAACTTGCAGGTAACAAAGTAGCCTCCTCCAGTTCTTGCACCTCCCCTTCTTGCTGGCTCAATCCAGTAACTGCATCCTCAGGGCCAAGAGTAGCATTTCTTGAGCTTCGGTGGAATGCCATCAGGAACTCCTGTTTGTTTGCTGTCTCATCCACCAAACCAGCAAAATGCTTCTGCAGAGCAAATGCCTCTTTACTATCGAGCTTTCCACCATCAAGCCCCACGGTTGGAATTACCCGTTTTGGGTGCAAGAACTTCACGTAGTCCCGCAACTCATTATAGCTCGAGTGCTCGCTATAAGGCACAAGATGGATCTCAAGTGAATCCTTTGTTCTAACTGCAAAGCCTTCCTTCTTGGTCTCGTACATCCAACCGGTCGGTACAAATCCAACAGCCTTGTTATATCCTCTCTCCACCATGATCTCCTTCATCTTCACAAAATTTGGCCGAAAATAGGGCCATGTTTCACCTAAAATATTCCACCCAGTGACATGCACATCTGTTGCTGCAGCATCCTCAGTAAAAACTCCATCCTCCCCACCAATCCCCAATAGAGTCAGGATTTCCATCTTCCTACTGTCCACATGGATCTTACAGCCACAGCGTCGTGCAACTTCCAGCAAAATCCTCTCCTTGCCCACCACGTAGGTCGCGATCAAACACAGCACGCGCTCTCCAGATGCTCTGCTCTCCTCCTTCACCCGCTTGATTGAGTTCACGACATACTCCAGTGACTCCTTTTGTGGAGGAAACGTAAATTTGGGATTGCAGTACGTGGTATCTCTCCGCATTTGGTCCAGATGAGCGGAAGAGGAATTGAACGGCACCGGGGCAATGGTTAGCATCCACAGCGACGACGCACCACCCATCCACGGTGACGCGGACGCCAGCATCGAGCACGACGACGAGCTGCGGCGGCACGGAGAGCACCGAGACGAGGAGGCGCGCGGTGAGCGGGGAGCAGAAGACGAGGCCGCGGCGCCACGAGGGGCCGAGGCCGGTGTAGTGGTCGGAGTGGAAGTGGGAGAGGAAGTAGGAGGCGGTGAAATCGCCGGCGTGGCGGAAGGCGTCGACGAGGAAGCGGGAGCCCGGGATGAGCGCCGTGGGCGGCACGGAGGCGGGGACGGGAGAGAGCGGCGATGCGGCGGAGGCGGAAGGGGGCTCGCTGTGGGGGGAAGGGAGGGAGGCGAGCGACGATAGGAACAGGGTGGAGGTGGCGACGGAGAGCGATTTGGAGTCCGGGGAGGAGAAGAGGTACGCCATTGGGTGCGGCGGCCGGCGGTGGGTTTAGGGTTTGGGCGCCGCGGCGGCGGCGATGGAGGACATGACGGTGCCGCCGTGGCGGGGGTGGCGCGAGAGGGAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0032900.1 | 1 | 28265495 | C | T |
| Osa01LNT0032900.1 | 1 | 28261278 | A | G |
| Osa01LNT0032900.1 | 1 | 28263152 | A | G |
| Osa01LNT0032900.1 | 1 | 28263457 | T | C |
| Osa01LNT0032900.1 | 1 | 28265598 | T | A |
| Osa01LNT0032900.1 | 1 | 28266001 | C | T |
| Osa01LNT0032900.1 | 1 | 28267541 | G | T |
| Osa01LNT0032900.1 | 1 | 28268739 | T | C |
| Osa01LNT0032900.1 | 1 | 28269240 | T | C |
| Osa01LNT0032900.1 | 1 | 28269609 | T | C |
| Osa01LNT0032900.1 | 1 | 28270210 | C | A |
| Osa01LNT0032900.1 | 1 | 28270214 | G | A |
| Osa01LNT0032900.1 | 1 | 28271783 | A | C |
| Osa01LNT0032900.1 | 1 | 28272326 | T | C |
| Osa01LNT0032900.1 | 1 | 28272462 | G | A |
| Osa01LNT0032900.1 | 1 | 28264370 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0032900.1 | osa-miR5801 | Cleavage | 4.0 | 11.528 | 1 | 24 |
| Osa01LNT0032900.1 | osa-miR5821 | Cleavage | 4.5 | 11.044 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR5516b | Translation | 4.5 | 9.092 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR171b | Translation | 4.5 | 18.956 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR171c-3p | Translation | 4.5 | 18.956 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR171d-3p | Translation | 4.5 | 18.956 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR171e-3p | Translation | 4.5 | 18.956 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR171f-3p | Translation | 4.5 | 18.956 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR408-5p | Translation | 5.0 | 17.793 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR535-3p | Cleavage | 5.0 | 22.967 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR1438 | Cleavage | 3.0 | 17.561 | 1 | 22 |
| Osa01LNT0032900.1 | osa-miR1862e | Cleavage | 5.0 | 20.173 | 1 | 24 |
| Osa01LNT0032900.1 | osa-miR1319a | Translation | 3.5 | 10.293 | 1 | 24 |
| Osa01LNT0032900.1 | osa-miR2099-5p | Translation | 5.0 | 20.08 | 1 | 22 |
| Osa01LNT0032900.1 | osa-miR2099-5p | Translation | 5.0 | 12.315 | 1 | 22 |
| Osa01LNT0032900.1 | osa-miR2864.2 | Cleavage | 4.0 | 17.966 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR2864.2 | Translation | 5.0 | 20.214 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR2863b | Cleavage | 3.0 | 19.684 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR2874 | Translation | 3.5 | 11.29 | 1 | 24 |
| Osa01LNT0032900.1 | osa-miR5149 | Translation | 4.0 | 16.857 | 1 | 22 |
| Osa01LNT0032900.1 | osa-miR5487 | Cleavage | 4.5 | 9.593 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR5487 | Translation | 5.0 | 10.604 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR5489 | Translation | 5.0 | 24.915 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR5503 | Cleavage | 4.0 | 13.075 | 1 | 22 |
| Osa01LNT0032900.1 | osa-miR5513 | Translation | 5.0 | 7.781 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR5516a | Translation | 4.5 | 9.092 | 1 | 21 |
| Osa01LNT0032900.1 | osa-miR5075 | Cleavage | 3.0 | 15.015 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0032900.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0032900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0032900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0032900.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0032900.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0032900.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0032900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)