© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0355400.1
GCTCAGGAAAATTCTTCAACAAACTCTTTTGTACACCATTTTCTGTTGCCGAAGTTACACCATATATGTCTCCCTTATTGTCTCAGGGAACCCTCTAGTTCAAAAAATCAAACAAATATGAGGCTTTAAGGTGGGGGGAAGAATCAAGCTCACAACCAAACCCTTGACCTAGGAATGGTGAAAAAAAAATGGAGTAACTGGACCGCTAATGCAGCAATCCAACACAACATGAAAAATTGTCAATGAACAACAACACATATTTGGAAGCAGGAGCAGCTAAAAATTCACTGATCCTGCGTCCGCCCATACCTGACAAGGGGGTCCCTTGACCCAAAGCCAGGATACACTTACAACCAATGTTGCATACCACTGCAACCCCGCAAGAGACCACAAAAGTGACTGGTAAACATAATTTCTACCTTCGGAATCAGTCTCGTCATACTGTTCTTGCGCTAACTGTTGGAAACACTGTCTCGTTTCACAGTAAGAGATTTTAAAACAGCTGAAGGGCAATCTTTAACCTATTCTGCTTCCACTTTGGTAGCTTCGCAAAAGCTTCCTTTGTCATCCCAAACCTTTCCCTGAACTCCGCCGCAGATAGATATGTCTCACGCTTAGTCACATCAATGTCTGTCACAGGATTGATGGAAGATGTCCTCAAGCGTTCGTATGGATACACTGGGAGCCCTTCCTCGTTTTCTGGCTGTCCCTCCTTCAGATCTTCCTGTATCGTTGGAGTTACTGTTGGGCTATCCTTTGAAGGGGTACTATCCTTGCCATTTGCCTCTGGTTTAGGCTTGCTTGCTTCAACTTGGGGCTTGTTTACATCAGGACTCGCTTTGATTGACTTTGGTATCAGAGTTGGCCTAGGTCGCTCGAAAGAAGCAGAAATTGCAGCAATTGAAGCAGCTCGTTGAGGTGGCTTTGTAGGATCTGAAGAGGGGGACTTCGGAGATGGTTTTCTGATAGCTGGTGGAGGTGTTGATAGATTCCGAGCATTTGGGTTCTCAAAGTTAGCAGCTAATGCATTGAATGCTGGGGATCTTCCTCTGACTCTTACACGGTCAGGACTGAACGACATACTTCTGGAGCGCTGAGATTTTTCAGGTACACTGGATCGTCCAGTGTGTGATGATGATGTCGTTGGCCTTCTTTTAGGTTTATCTAATTTTGGTTTTACTCCATCCTTCACTATAGATAACCTCCTTTCAAATGAGTTTCCATGCATGGCTGATTTTGCAGAGTCCCAAGTGAAGAACCTGGTGAAAAATTGGGGCTCACTCCCTTCAGTGATGACATAAACTGGTGTTTCTTGTGATGAGTTCTCCATCAAAATGTCAAGTTCTAAAAATTTCTCTCCAACGCTCAAAGCTTGTGCTCGCATTTTTGTGTCCACACGTTGTCCAACCCATACGAAGACACATGAATGACAGTCCAAAATAAAAACGTCCTCTGTCATCAAATCATCTTGAGTAAAGTTGAATATTTCTCTAACCTTAAGCACTCCCTTTGAAAAAGTACAAGAGAACAAATGAGGATCACTTTCTTGATCTTTTGCAATCTTCTGGCTGGGGTACTCTGACTTGACTCCAAGTAGCTTCCAAAACTGATCATATTCTGACCCTTCCTTGAGCATTCTGGACTGAAGATTTGGCTTGATCACATCCAGCTGCCTCTCAGCAAGCTCTTGATCCATTGACGAGCTTAAATTCCCAATCCATGTAAATAGTGTATCTCCATCATGTAGTACATAACAATAAGAAGAGTTCAGCGAGGTAGCAGCCGTATCAACTTGAATGGCTTGCATATTTTCTGGTCCAGAGCCTTGAACCCGGAAAAGGGCAACCCCATTTTCTGAATATGTGTCATCCTCAATACCGTTTTCTGAGACAAATTTCTTATACCCAGTACTAACACCACCCTTGAAGATAACCAGGTTCTGAAATATTGAGAAAAACTCAGCTGGTTCCTTTCCTTCATAAAGGCGAACCATGACTGCCTGAAATTTCAGAGACTCAACCATCTTGCTAGCAACTGAAATGGCTGTAGTCTTCTCGTCCTGAACACTCTTTTTCCCGAACCAAGTACCAATGAGACACTCCTCGCCTTCCTCACCAGGATAGCTATATTGAAAGATATAACAGTCCCCACTGTAGAATTTGCATTGCTCAGAGAATGAAAGGAATGTCTTTTCAGTGCCATTTACACGCCAAACCTGCAGGTTGCCTGTGCAATCAATTTGAGGTTGAGGCTCTTCCTTCACAGGAGCAGCTTTTGCAAGACCCTTAACATTAAATCCTTGCCGCTTAAGAAGAGCTGCAACTTTTCCTCTGCTCTCATCAGACACAACAGCATCAGCTTTCTTAGGCCATTTACTGAATTTTGATCGGAATATGACAGTCTCAAATCCTTCCATGAGACGAACAATATGAGATTTTGGCCTGTTTACTTCACGAAGTAATTCCTCTGCAGCAGATCCTGCCCGTTTCCTCTCTTCGAGTGGTGTCTCTCTACCCATCCAGACATAAATTTCAGATCCACAGTCTAGCAGATAGCACTTTGTTGAATCTAGCAACTCTCTTGTTAGAACATCAAAATCAACTGGTACTGTCTGACCCTTATTTAGACAGATCAACTTCGAAGAGAAAGCAGAATCTTTTCCATTAAGATCAGAAAAGGTTTTTCTTGGAAGAGGTGCAAATCCACCAAAGAGACCCCAGAATTCACCGGCGTCAGCATCTGCCATCAGCTTGCCGTCCTCAACTGAACCTACGTCACATTTGCCCTCATGGTTGCTGTCTTTCAAATATTGCACAACCTCAAGGGCTTTAGCCCTCTCCTGAATACTTGAATTCGATCCATTGAACTGGAATATTTTGGACTTTGTATCTAAAATAAATATATCATCATGGTTCAGCGATGATCTTGCAAACGGAACCTCTTTGACATGGACTGTATGCTTTCCTCTGCAGACAAATAACCTTGTCACATGCTCCCGTTCATTGATTTCAGTATGCCTGAAACCAGATGCAATTCCACCTTCCTCTGGTATAATACAAGGTTTAAAATATGAAAGAAATCTCTCTGTCTCATTCCCCTGTACTTCACGGTATTGAACAGCACGTCCACCAAGAGCAGCATCCAATTCCACAGTCTTGATTGCAGCTGTACCAGCTTCATCCTGACTGGTATCTTTACCAAGCCAATAATGGATATCATGCCGAAAAGAACCATTTTTAAGAGCGGTTGTCTTCAATATCACATAGGAATCTCCTGTGAAAAATCTCCCATGTGATTCCTTGGGAACTGGAACAGCTTGCAGTTTTTCAATCCGCCATATTTCCAATCCATCTTTTTGACCAGCCCCTTGAAAGACCGCATCCACTTCCCTCATTGAAACAGCCATAGAACCCCTAGGTTTTGTAGGGCTGGTCTTGGGTGATTTTTGCTTCAGGAGAGAAGAAAATGTGTGCAGGGTGATGGATGCGGCGGAAGCAGCAGGACGAACGACGGCCGCCCTGCTCGCTCGCGGGATAGATGGGGATCGGCGGAGGCCAACTGACGAGGTGGGGGGTTCATGGTACGCACGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0355400.1 | 6 | 27136531 | C | A |
| Osa06LNT0355400.1 | 6 | 27136621 | C | T |
| Osa06LNT0355400.1 | 6 | 27137089 | T | C |
| Osa06LNT0355400.1 | 6 | 27138088 | G | A |
| Osa06LNT0355400.1 | 6 | 27138138 | C | T |
| Osa06LNT0355400.1 | 6 | 27140529 | C | T |
| Osa06LNT0355400.1 | 6 | 27140788 | A | G |
| Osa06LNT0355400.1 | 6 | 27140924 | G | A |
| Osa06LNT0355400.1 | 6 | 27141353 | C | G |
| Osa06LNT0355400.1 | 6 | 27141613 | A | G |
| Osa06LNT0355400.1 | 6 | 27143055 | A | G |
| Osa06LNT0355400.1 | 6 | 27143118 | G | T |
| Osa06LNT0355400.1 | 6 | 27144019 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0355400.1 | osa-miR5824 | Translation | 5.0 | 19.631 | 1 | 24 |
| Osa06LNT0355400.1 | osa-miR6253 | Translation | 4.5 | 17.78 | 1 | 22 |
| Osa06LNT0355400.1 | osa-miR6253 | Translation | 5.0 | 16.181 | 1 | 22 |
| Osa06LNT0355400.1 | osa-miR156a | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156a | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156a | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156b-5p | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156b-5p | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156b-5p | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156c-5p | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156c-5p | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156c-5p | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156d | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156d | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156d | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156e | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156e | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156e | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156f-5p | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156f-5p | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156f-5p | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156g-5p | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156g-5p | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156g-5p | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156h-5p | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156h-5p | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156h-5p | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156i | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156i | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156i | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156j-5p | Cleavage | 5.0 | 14.487 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156j-5p | Translation | 5.0 | 20.934 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR156j-5p | Translation | 5.0 | 8.891 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR393a | Cleavage | 4.5 | 19.214 | 1 | 21 |
| Osa06LNT0355400.1 | osa-miR156l-5p | Cleavage | 5.0 | 14.487 | 1 | 21 |
| Osa06LNT0355400.1 | osa-miR156l-5p | Translation | 4.5 | 8.891 | 1 | 21 |
| Osa06LNT0355400.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 14.208 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR319b | Translation | 4.5 | 14.208 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR393b-5p | Cleavage | 4.5 | 19.214 | 1 | 22 |
| Osa06LNT0355400.1 | osa-miR437 | Translation | 4.5 | 17.189 | 1 | 21 |
| Osa06LNT0355400.1 | osa-miR396e-3p | Cleavage | 4.5 | 14.853 | 1 | 24 |
| Osa06LNT0355400.1 | osa-miR1860-5p | Translation | 4.0 | 18.513 | 1 | 21 |
| Osa06LNT0355400.1 | osa-miR1861n | Cleavage | 4.5 | 21.279 | 1 | 22 |
| Osa06LNT0355400.1 | osa-miR1863a | Cleavage | 4.5 | 20.813 | 1 | 24 |
| Osa06LNT0355400.1 | osa-miR2093-5p | Translation | 5.0 | 17.961 | 1 | 20 |
| Osa06LNT0355400.1 | osa-miR2097-5p | Cleavage | 3.0 | 16.941 | 1 | 22 |
| Osa06LNT0355400.1 | osa-miR2122 | Translation | 4.0 | 19.498 | 1 | 22 |
| Osa06LNT0355400.1 | osa-miR2863b | Cleavage | 4.5 | 14.259 | 1 | 21 |
| Osa06LNT0355400.1 | osa-miR1863b | Cleavage | 4.0 | 20.813 | 1 | 24 |
| Osa06LNT0355400.1 | osa-miR5076 | Cleavage | 4.0 | 15.94 | 1 | 22 |
| Osa06LNT0355400.1 | osa-miR1861g | Cleavage | 5.0 | 21.279 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0355400.1 | 6 | nan | Resistance or Tolerance | Blast resistance | RG778 | RZ682 |
| Osa06LNT0355400.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0355400.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0355400.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0355400.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0355400.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0355400.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0355400.1 | 6 | OVP1 | Others | Others | nan | nan |
| Osa06LNT0355400.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0355400.1 | 6 | ppl6.1 | Resistance or Tolerance | Drought tolerance | RM3 | CDO78 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)