© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0355600.1
AAAATCGGAAGGCCAGCAGCACTTCAAAATCAGCCAAGAGTTGTTCAAATATACAGTGATGATTTCATCAGCTTACATGGAACATGTACAAAATATCTACAAAGCAATTGGACCATTTATCCATTGTTCGTTCAGTACAACAATTCTGTTAAGTTAGAACTTGTGTGAAAAAAAATGAAAATATATCATGGAAGTATGGAACAGGTAGTTAGAGCTACTCTTGCGAGTTTCCACAAATATACACGTTAGATTCGTCGTAGAAGTTCACTAATCTTCTTGAGACCTTCTAGAGCTGCTTTTGCTTTAGCTTGCTCTATACTACCAAGAACAATTTCCTCTGATTTATCCAGTGAGGTAGAGTGCAAATTTGGTTGAAACAACAAGTCAATAACCTCAATGTTTTCAACCATAGATTCCCCAAGTAACCTTAATGTTCCAAGTAGCTCTTTATCAGCCACATCTGAGCTTGAACCTAGTTCAAATGTTTCTTTGCGGCCAACTTCATGCACAGCAAAATTTTGTTGATATTTTACCTCTGATTTCCCATTAACAGAACACGGTTTATTCTGTTGTGATTGCTGATAATCGACCAATGCACATGTTTGAATGGCTGCGATTGTCACTTCATCAATCTTATCATTATGCACAGGGAGTGGATCAGGCTCACTAACCACCTTATCATCATGGGAAGCACATGGCTCATCTGCATGATGAGTCTCATGGTCATACTCCGTACCACATGATAACGAGGTACTGCTGTCTCTTGATAAATTTCCACATGCAACTCCAAGAGCATCTCTAACATCAACAGAACTGGAGCGGTGAACTTCAGGCTGTCCTGCCTCCAATACATTGTTTGAGGTGGTGATCATATTCTCTGCAGTACATTGTTCAACATGACTTGTTCGTTCTCTTATAGGCGTGTGAAGTGTACCATTTACCAAATTTACTGGAACTATACCAGATCTGTGATGTTCATCAGCAGTAGATTGCGTACCTGAAGTCGAATTGCTATCTTCAAAATTAGCATCCTTGGTTCTCGAAACATTTGATTCAGTGTTGGGGGAACTTCTTCTGAACAAACCTCTTACCTTCATCCTATTAATTGAACCACCACTTCTTTTCTCTTCTGACATCTGGAGTATCTTCCATGTCTCTTCCCAGTAGTTGGGTGGATTCAAGGGAGATTTTCCTCTGAGAGGAGATGAAGGAAGATTTGCTTCAAGAGCAAAAGGTTGCAATAATTTGGCTTTATCAATCAAGCTCTTTAAGTCAGTGTCTCCAGGAAAATTTAACAATCTTACTAGGCATGAAGTTGCATGTTCACTTCCTAGCAAGGAAGATCTGAGATGGAGCATCATTGAAACTGCCATTGACAAAATCAGGGCACCACGATGAGAACATAAAATCTTAAACTGATAGTCTGATTGATTCTTTATGTCTGCACAATATGAATGGTTAGGAGATGAGAAGATCTCATCCCAAATAAACAGAAGATTGTCAAGTGAAAATTCACGACCGAATAGAACTCTCAGCCATCGTAGCGCAAAGTACTGAGGCTCTACTCCCAACTCCATCAAATGACTGTGAAGAGGGGAATCCACACTAGCAAGCAAGTGATATATTGCAGATGATGCCTCCCTTACAGGTGTTAAACCTGTGCTTGATTCTGGTGCAGGACTGAGAGAATAGAAGTCAGTAATAGCAACCACACCTTGTGCACCATTCATCGAACCATGCATCAAACTCTCAAACATACAATAAGCGTCATGCTCCATGAACTTTTCAGACAAAATAATACCCAGCTCCCCTTCTGCTCCATAAGCATCATTAATCAAGAAAAGGTCCCTCGTATCAGAATCAAGATCATCCAAACTTCTTATTTTAGCTGCACTACCCTCAATTGTGTTTGTCCTGTCACTCCTGTTCAGTTTTATCCTATCTGGAAATGTTTGGCCATCAAAATCATCACTAAAAAGCTCATCATGAAGCTCCCTGACTTGTTTGAAGTAATGCACATCAGCATGGAGGACATAGAGAAGAGGAGCTAAGAGCTCATGCATTCCTTGTTTGTAACCGAGCTCTGGGTACCTAAGGCTCCAAACTAACAGTATACGTCCAAGCATGGACTGACATATGGTTGTTTGGAAGAAATTTCCCAATTCAGGGTAGAGCCGAGACAAATCTTGGTTCAACATTTTCTCTAGTTCTGCATTTCTGAAATATTGGCCCCAAGTGCTTTCTGGGTTCTGTGATAGTGGATTTTCCACAGCAAGGTCAGGAGCGTTTTCTTCATCCTTAGAGAGATGGGGATCTATTAACAGCCGCCGCCGCAAATTAGCATACCTACAACAAAAACAAATTACAAAACCAGGAGTAAAAACCTTCGAACCTAACAAACTTGAATTCTTTTGCCCCCCATATTAATAAGTAGAGTAATTCATAACAGTATAATACCATACAACATTCACCGTCATCGAATGCCCAGAGAAATGAAACATCAAATTGGCATATGTAAAGCTTAAGTTTGAATGGAGGGTGAGGCTGACATGTGGGCCCGGGTGGCATTTGGGAATGAAAATTTGGGAGAGTGGCATTTGAGCACTGGCATTTTGAGAGAGTGGCAAATAGTAAATTCATAGCTAAGCAGCTCATTACCATTAAGCGTAATCAACACACTAACGGGGATAGATGATCTAAGAAACCATACATCGCAAAACGAATTAAAGAATCGCTGCATAGCTAAGCATTCCAAGCAAGGAAAGCATCGCCGGGGTCACCAAAGCATTCCAAGAACGGAGCTGGAATTCCCCGAGGGCCCTGACCTGCGGCGGGAGTCGGCGGCGGCTCGGCGGAACTCCTCGGTGGACACGGAGGCGCAGTCGGGGAGGACGCCGAGATCGGCGCGCCACCGGGCGCCGCGGAGCGCGGAGAACCGCTCCCTCGCTGGACACTCCGGCATTGCCGCTGCCTTTTGGCTTCCAGCCTCCCTAACAAATCAGGCAAAAGGAAGCATGAGAAGGCGGCCGGAGCAAATCATCAGCTGGGTTGGGTGGGTCGATCCGCGAGCACGAGGAGGGCCAAGCGAGGAGAGGATTGGGATCGAGGAGGACACGGGGGGAGCGTTCTTGGGAGGGATTGGGATTGGGAGGGAAGAAGGGAAAGCGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0355600.1 | 6 | 27265574 | A | G |
| Osa06LNT0355600.1 | 6 | 27266567 | T | C |
| Osa06LNT0355600.1 | 6 | 27266828 | T | C |
| Osa06LNT0355600.1 | 6 | 27266926 | T | C |
| Osa06LNT0355600.1 | 6 | 27268777 | T | C |
| Osa06LNT0355600.1 | 6 | 27266877 | A | G |
| Osa06LNT0355600.1 | 6 | 27266122 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0355600.1 | osa-miR812p | Translation | 5.0 | 14.214 | 1 | 24 |
| Osa06LNT0355600.1 | osa-miR443 | Translation | 3.0 | 12.947 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR820a | Cleavage | 4.5 | 20.662 | 1 | 21 |
| Osa06LNT0355600.1 | osa-miR820b | Cleavage | 4.5 | 20.662 | 1 | 21 |
| Osa06LNT0355600.1 | osa-miR820c | Cleavage | 4.5 | 20.662 | 1 | 21 |
| Osa06LNT0355600.1 | osa-miR1440a | Translation | 1.0 | 14.472 | 1 | 20 |
| Osa06LNT0355600.1 | osa-miR1441 | Cleavage | 4.5 | 15.296 | 1 | 21 |
| Osa06LNT0355600.1 | osa-miR1847.2 | Cleavage | 4.0 | 21.364 | 1 | 24 |
| Osa06LNT0355600.1 | osa-miR1875 | Translation | 4.5 | 8.682 | 1 | 24 |
| Osa06LNT0355600.1 | osa-miR2100-5p | Translation | 5.0 | 15.601 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR2118d | Translation | 5.0 | 9.436 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR2118e | Cleavage | 5.0 | 19.167 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR2118e | Translation | 4.0 | 9.436 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR2118o | Translation | 4.0 | 9.436 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR2118p | Translation | 4.5 | 9.436 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR2118r | Cleavage | 5.0 | 19.167 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR2118r | Translation | 4.0 | 9.436 | 1 | 22 |
| Osa06LNT0355600.1 | osa-miR2920 | Cleavage | 4.5 | 17.933 | 1 | 23 |
| Osa06LNT0355600.1 | osa-miR812k | Translation | 4.5 | 14.097 | 1 | 24 |
| Osa06LNT0355600.1 | osa-miR812l | Translation | 4.5 | 14.097 | 1 | 24 |
| Osa06LNT0355600.1 | osa-miR812m | Translation | 4.5 | 14.097 | 1 | 24 |
| Osa06LNT0355600.1 | osa-miR3979-3p | Cleavage | 5.0 | 15.111 | 1 | 20 |
| Osa06LNT0355600.1 | osa-miR5150-3p | Cleavage | 4.0 | 20.417 | 1 | 24 |
| Osa06LNT0355600.1 | osa-miR5504 | Translation | 4.0 | 8.821 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0355600.1 | 6 | ppl6.1 | Resistance or Tolerance | Drought tolerance | RM3 | CDO78 |
| Osa06LNT0355600.1 | 6 | nan | Resistance or Tolerance | Blast resistance | RG778 | RZ682 |
| Osa06LNT0355600.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0355600.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0355600.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0355600.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0355600.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0355600.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0355600.1 | 6 | OVP1 | Others | Others | nan | nan |
| Osa06LNT0355600.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)