© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0356000.1
TTTGGAACTAAACTCGGCCTTATTATCTCTACTTCCATCCTCACATTCAACATTAGCAGAATGACAACGCAAAAGAATCGATTGTGATGTTTTCTGCTATATATTCACACTTATTGCAAGTAATTAAATTGAGGGATAGCCATTTATTTATCTACGCGCATGGCATGCCAGAAATCATCTGCACATCTAGCACGAATAGTTGCAACCGGTTGGGACCCTGTGTCATGTGTCCATGTAGCGTCAACCAGCTAGTTGATTGATGGCTTAACAGCTCGCAGCGATAGGTTCAGTAGCTTTCCTCAGCCATTCCTTCTCCTGCTCATTCAGGTAAGGTTGCAAAATTTTTCTGCAATCCGAGTGATACGCATTTACCCATTCAATCTCAGCAGGGGTAAGTAAGGTGGTGTCTATCAGTTTTGTCTGGTACGGAGTCCATGTTATATGTTCAAAAGCCAAATAACCCTTATCTCCAAAATTAAATTTAGTATTGGCTTCTTTAACTATCAGAACATTCTCCAACCTTATACCAAAGCTTCCGTCTTCATAGTAACCAGGTTCATCTGTTACAGTCATCGATGCTTGTAGTGGTACATTTCTAGCAGAAGGTCTGAAGCTAATTAGATGAGGACCTTCATGAACATTCAAATAAGATCCAATACCATGGCCTGTACCGTGCCGGTAATCAAGACCACTTCTCCAAAGTGGTGTTCGTGCGAGAATATCAATAGCATGCCCTGTGGTTCCATTGGGAAATACAGCAGTGTCCAGTGCAATGTGGCCTTTCAAAACAGCTGTGTAGCAGGACTTCTCATGCTCAGAGGGTTTGCCAAAATGTACAGTTCTTGTAATGTCTGTAGTACCATCAAGATACTGAGCCCCAGAGTCACACAGATATATTTTATCAGCATCAAGTTCAGCACATGAACTTGCTTCTGGTTTATAATGAATCACTGCTGCATTTGGTCCCACGGATGAAATCGTAGGAAAACTCAGACCTTTGAAGTGCTCTTTAGATGCACGGAAACCTTCAAGTTTATCGCTCACAGAAACCTCTGTAAGTTTTACATTCATATGCTCCTTTTTCTGTGATCCCTTGGCCTCAGTAAAGTAACCAGAAGCTCCATAATTCTCTTGCATCTGCTTGTCAAGCCAAGCAAGGTATTGCACGACAGCCGCACCATCTCGAATATGTGCCTTCCTCAAACCATCCAGCTCTACGGGATTCTTCACAGCCTTTGGAAGAGCAATAGGTGATTGCAGCATCAGAACTTGATATTGATCCAGTTTTGAGTAGAGTGCAAGGCAGCATGAATTTGAATCAATCCAAACTTTTGAATTCTCATTCATATCATTTTCCCCATGAGAGCTACCATTGACTGCAGAACCTTTTAGCTGTCCAGATGCAAGCAAGCTTGCATCTGATTGAACCATATTATAGTCTTTGATGTCAATACCATTCTCAGTCATGTAGTTCTGGACCTCAACAGATACTTTTCTCTTATCCACATAAAAGAAAGCACTGTGCAAGGTTACAATAGAATAAGAATGGACCACTGGGCTGTAGTGCACATCATTTCCTCTAATGTTGTACAACCACGCAACCTCATCAAGCGCAGCAATTATAATGCCCCTAGCCTTTTCATGTTGTAATTTTTCTCTTAACTCCTTAAGTTTTTCGGTAACACTACACCCAGCATACTCTACAGGTTGCACAAATACAGGTAGAGCATTAACAGGAGGACGATCCTTCCATATTTCATCTACCAAGTCAGAAGAAAGCTGAAACAGTGTCTGGTGCTTCTTTGAAAATGCATGCTCATATCTCTGGGCAGTGTCAACAGAGATGCACCATGGATTAATTCCAATGACAGCTTCATCTGACAGGTTATCAGCTATCCAAACTTCAACTGGGGGATCTTCTCCCATGCGCATCAATTTCCAGCGATTAGTGAGTTGCTGCTCTGCCTGCAAGAAGTAACGCCCATCCGTCCAAAGTAGCGCCTCCTTCATAGTGATAAGCGCCAAACCAGCGCTCCCGGTGAAGCCGGAGACGAACTGCCGCCGCTTGTCCCGCTCCGACACATACTCGCTCTGGTGGGCGTCCTCGGACGGGACGACGAGCGCGTGGAGCGACGGGGAGTGGGCCGCCATGAGCGCGCGCAGCTCGTCCAGGAGAGCGTCCCTCCCCGCCGCCGCCGAGTCCGCCGACATTGTGCTCCGCGGCTCAGCTCTCGTCTGTGGTGCAGAGCCTTCTCGAGAAGAAGGAGGAGGCGGCGGAAGTAGAAGGGCGGCGGCGGCGGCGGCTTTCCGGCGAGGAGACGGGAGTCGAGGCAGTTCAGAACGGTTTTTGTTTCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0356000.1 | 6 | 27419640 | T | C |
| Osa06LNT0356000.1 | 6 | 27421294 | A | C |
| Osa06LNT0356000.1 | 6 | 27421365 | G | A |
| Osa06LNT0356000.1 | 6 | 27421566 | T | C |
| Osa06LNT0356000.1 | 6 | 27422423 | T | C |
| Osa06LNT0356000.1 | 6 | 27422678 | C | T |
| Osa06LNT0356000.1 | 6 | 27422782 | T | C |
| Osa06LNT0356000.1 | 6 | 27423085 | A | T |
| Osa06LNT0356000.1 | 6 | 27423197 | A | G |
| Osa06LNT0356000.1 | 6 | 27423315 | T | C |
| Osa06LNT0356000.1 | 6 | 27423977 | A | T |
| Osa06LNT0356000.1 | 6 | 27424328 | T | C |
| Osa06LNT0356000.1 | 6 | 27427554 | A | G |
| Osa06LNT0356000.1 | 6 | 27424831 | A | G |
| Osa06LNT0356000.1 | 6 | 27425783 | A | G |
| Osa06LNT0356000.1 | 6 | 27424524 | T | C |
| Osa06LNT0356000.1 | 6 | 27424560 | A | C |
| Osa06LNT0356000.1 | 6 | 27424682 | T | G |
| Osa06LNT0356000.1 | 6 | 27425670 | T | C |
| Osa06LNT0356000.1 | 6 | 27425775 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0356000.1 | osa-miR5536 | Cleavage | 3.0 | 17.499 | 1 | 22 |
| Osa06LNT0356000.1 | osa-miR6248 | Cleavage | 3.0 | 11.822 | 1 | 21 |
| Osa06LNT0356000.1 | osa-miR172a | Cleavage | 3.5 | 14.253 | 1 | 21 |
| Osa06LNT0356000.1 | osa-miR172b | Cleavage | 4.0 | 14.253 | 1 | 21 |
| Osa06LNT0356000.1 | osa-miR172c | Cleavage | 4.5 | 14.253 | 1 | 21 |
| Osa06LNT0356000.1 | osa-miR172d-3p | Cleavage | 3.5 | 14.253 | 1 | 21 |
| Osa06LNT0356000.1 | osa-miR529b | Cleavage | 5.0 | 9.403 | 1 | 21 |
| Osa06LNT0356000.1 | osa-miR1876 | Cleavage | 5.0 | 18.878 | 1 | 24 |
| Osa06LNT0356000.1 | osa-miR5498 | Translation | 4.0 | 18.095 | 1 | 21 |
| Osa06LNT0356000.1 | osa-miR5499 | Cleavage | 4.5 | 17.827 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0356000.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0356000.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0356000.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0356000.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0356000.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0356000.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0356000.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0356000.1 | 6 | nan | Resistance or Tolerance | Blast resistance | RG778 | RZ682 |
| Osa06LNT0356000.1 | 6 | ppl6.1 | Resistance or Tolerance | Drought tolerance | RM3 | CDO78 |
| Osa06LNT0356000.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)