© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0356400.4
ATATGTACTCAAACTTTGGGAAATCAAATCCACACAATCATCTTAATGAAAGCTGACCAAATATATTTTTTTCGATACATCTTCTATAAACAACATATATTTAAAATCGTGCTCACATACAGCTCCACAACAATATTTTGGAACCACGCAATTATGCCTTATTTTGCCATTGGCCTATTACCAAAAAAATAACCATAGGAAATTAATTGTTTGCTCGCTCACATGCGACGCGATCTCTTTTTAGACAAAATTATATAGATGTTAATGATTCCCATGCAACCCAATGCAAGAGTACGCATGTCTATGAATTAGATGTTGATGCCACTCTTGTATTCAGTGCCGGCCGTAAAGCTTTCGGGGATGACGTCGTCGACGACACGGTAGCCACCGTTCTTGACAAGGAAGCGGACGGAGAAGGGGCCCTTGAGGGTCGCCTCACTCTTGAGCGACCAGGTGTTAGTCGATGACTCCTTGAGTGCCACCCAGTCCTTGCCGCCCTTCTCCTTGATCTCCACCTCAGAGATGGCGACGTTGGTGACGAGCTCTAGACTTTTTCCGCTAGAACCCTCACCGACCTTGAAGGTGACCTCAGTGGCGCACGAGCCGACGACCAACAATGCCGCCACTGCCACAGAGAGCCGGAAGGAGGACAACGAGGCCATTGGCGAGCTAGCTAGTTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0356400.4 | 6 | 27334017 | T | C |
| Osa06LNT0356400.4 | 6 | 27337702 | G | A |
| Osa06LNT0356400.4 | 6 | 27338589 | C | T |
| Osa06LNT0356400.4 | 6 | 27338627 | T | C |
| Osa06LNT0356400.4 | 6 | 27339896 | T | C |
| Osa06LNT0356400.4 | 6 | 27339922 | A | G |
| Osa06LNT0356400.4 | 6 | 27339935 | C | T |
| Osa06LNT0356400.4 | 6 | 27340326 | A | G |
| Osa06LNT0356400.4 | 6 | 27340333 | A | G |
| Osa06LNT0356400.4 | 6 | 27340552 | C | T |
| Osa06LNT0356400.4 | 6 | 27340826 | A | G |
| Osa06LNT0356400.4 | 6 | 27342569 | G | A |
| Osa06LNT0356400.4 | 6 | 27343013 | A | G |
| Osa06LNT0356400.4 | 6 | 27343309 | C | T |
| Osa06LNT0356400.4 | 6 | 27343684 | G | A |
| Osa06LNT0356400.4 | 6 | 27345073 | A | T |
| Osa06LNT0356400.4 | 6 | 27345168 | T | A |
| Osa06LNT0356400.4 | 6 | 27345460 | T | C |
| Osa06LNT0356400.4 | 6 | 27345766 | A | T |
| Osa06LNT0356400.4 | 6 | 27345854 | T | G |
| Osa06LNT0356400.4 | 6 | 27345871 | T | C |
| Osa06LNT0356400.4 | 6 | 27346435 | A | G |
| Osa06LNT0356400.4 | 6 | 27346631 | C | G |
| Osa06LNT0356400.4 | 6 | 27347764 | T | C |
| Osa06LNT0356400.4 | 6 | 27347993 | G | T |
| Osa06LNT0356400.4 | 6 | 27349285 | A | G |
| Osa06LNT0356400.4 | 6 | 27349313 | T | C |
| Osa06LNT0356400.4 | 6 | 27349497 | T | C |
| Osa06LNT0356400.4 | 6 | 27349822 | A | G |
| Osa06LNT0356400.4 | 6 | 27349928 | C | T |
| Osa06LNT0356400.4 | 6 | 27349986 | A | G |
| Osa06LNT0356400.4 | 6 | 27350022 | T | C |
| Osa06LNT0356400.4 | 6 | 27350057 | T | C |
| Osa06LNT0356400.4 | 6 | 27350084 | A | G |
| Osa06LNT0356400.4 | 6 | 27350236 | A | G |
| Osa06LNT0356400.4 | 6 | 27350249 | A | G |
| Osa06LNT0356400.4 | 6 | 27363250 | T | C |
| Osa06LNT0356400.4 | 6 | 27363315 | G | A |
| Osa06LNT0356400.4 | 6 | 27363420 | T | G |
| Osa06LNT0356400.4 | 6 | 27363472 | A | C |
| Osa06LNT0356400.4 | 6 | 27363528 | C | T |
| Osa06LNT0356400.4 | 6 | 27363604 | G | T |
| Osa06LNT0356400.4 | 6 | 27363734 | T | C |
| Osa06LNT0356400.4 | 6 | 27364541 | T | C |
| Osa06LNT0356400.4 | 6 | 27366002 | A | G |
| Osa06LNT0356400.4 | 6 | 27366429 | A | G |
| Osa06LNT0356400.4 | 6 | 27366625 | T | C |
| Osa06LNT0356400.4 | 6 | 27366915 | A | G |
| Osa06LNT0356400.4 | 6 | 27367321 | C | T |
| Osa06LNT0356400.4 | 6 | 27367766 | A | G |
| Osa06LNT0356400.4 | 6 | 27368482 | A | G |
| Osa06LNT0356400.4 | 6 | 27368578 | T | C |
| Osa06LNT0356400.4 | 6 | 27369226 | A | T |
| Osa06LNT0356400.4 | 6 | 27369471 | T | G |
| Osa06LNT0356400.4 | 6 | 27369548 | T | G |
| Osa06LNT0356400.4 | 6 | 27369745 | C | T |
| Osa06LNT0356400.4 | 6 | 27369755 | C | T |
| Osa06LNT0356400.4 | 6 | 27369769 | T | C |
| Osa06LNT0356400.4 | 6 | 27369859 | T | C |
| Osa06LNT0356400.4 | 6 | 27369996 | C | T |
| Osa06LNT0356400.4 | 6 | 27370031 | C | T |
| Osa06LNT0356400.4 | 6 | 27370289 | T | C |
| Osa06LNT0356400.4 | 6 | 27370678 | C | T |
| Osa06LNT0356400.4 | 6 | 27370748 | A | T |
| Osa06LNT0356400.4 | 6 | 27370765 | A | T |
| Osa06LNT0356400.4 | 6 | 27370773 | A | G |
| Osa06LNT0356400.4 | 6 | 27370856 | T | C |
| Osa06LNT0356400.4 | 6 | 27370867 | A | G |
| Osa06LNT0356400.4 | 6 | 27370907 | A | C |
| Osa06LNT0356400.4 | 6 | 27371774 | C | T |
| Osa06LNT0356400.4 | 6 | 27371775 | G | A |
| Osa06LNT0356400.4 | 6 | 27371907 | A | G |
| Osa06LNT0356400.4 | 6 | 27372055 | T | C |
| Osa06LNT0356400.4 | 6 | 27372220 | T | C |
| Osa06LNT0356400.4 | 6 | 27372341 | A | G |
| Osa06LNT0356400.4 | 6 | 27372548 | A | G |
| Osa06LNT0356400.4 | 6 | 27372600 | T | C |
| Osa06LNT0356400.4 | 6 | 27372621 | A | G |
| Osa06LNT0356400.4 | 6 | 27372622 | T | C |
| Osa06LNT0356400.4 | 6 | 27372628 | T | C |
| Osa06LNT0356400.4 | 6 | 27372869 | A | G |
| Osa06LNT0356400.4 | 6 | 27372917 | C | T |
| Osa06LNT0356400.4 | 6 | 27373002 | C | G |
| Osa06LNT0356400.4 | 6 | 27373200 | T | C |
| Osa06LNT0356400.4 | 6 | 27373220 | A | G |
| Osa06LNT0356400.4 | 6 | 27373334 | A | G |
| Osa06LNT0356400.4 | 6 | 27377601 | A | G |
| Osa06LNT0356400.4 | 6 | 27377688 | C | T |
| Osa06LNT0356400.4 | 6 | 27346670 | A | G |
| Osa06LNT0356400.4 | 6 | 27346852 | C | T |
| Osa06LNT0356400.4 | 6 | 27366144 | G | A |
| Osa06LNT0356400.4 | 6 | 27370892 | A | G |
| Osa06LNT0356400.4 | 6 | 27378079 | T | C |
| Osa06LNT0356400.4 | 6 | 27343709 | A | G |
| Osa06LNT0356400.4 | 6 | 27363913 | G | A |
| Osa06LNT0356400.4 | 6 | 27371416 | G | T |
| Osa06LNT0356400.4 | 6 | 27335187 | T | C |
| Osa06LNT0356400.4 | 6 | 27335278 | T | C |
| Osa06LNT0356400.4 | 6 | 27335133 | T | C |
| Osa06LNT0356400.4 | 6 | 27335154 | C | T |
| Osa06LNT0356400.4 | 6 | 27335183 | A | G |
| Osa06LNT0356400.4 | 6 | 27333499 | A | G |
| Osa06LNT0356400.4 | 6 | 27334223 | G | T |
| Osa06LNT0356400.4 | 6 | 27334386 | A | T |
| Osa06LNT0356400.4 | 6 | 27334769 | T | A |
| Osa06LNT0356400.4 | 6 | 27337270 | G | C |
| Osa06LNT0356400.4 | 6 | 27335333 | T | C |
| Osa06LNT0356400.4 | 6 | 27335436 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa06LNT0356400.4 | DTM_#DNAt_MULE_japo_Os0297 | Chr6 | + | 27335124 | 27335588 | 464 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0356400.4 | osa-miR5526 | Cleavage | 5.0 | 12.991 | 1 | 21 |
| Osa06LNT0356400.4 | osa-miR5819 | Cleavage | 4.0 | 21.327 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0356400.4 | 6 | nan | Resistance or Tolerance | Blast resistance | RG778 | RZ682 |
| Osa06LNT0356400.4 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0356400.4 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0356400.4 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0356400.4 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0356400.4 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0356400.4 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0356400.4 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0356400.4 | 6 | ppl6.1 | Resistance or Tolerance | Drought tolerance | RM3 | CDO78 |
| Osa06LNT0356400.4 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)