© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0358200.1
CAAACTTCAGAAATAGCCAAAACTCAAAAAAAGCAGTACAATGCATAGTTTGTTCAGTCATGGACACATTACACATGTCCCTAATCTAGACGCTTAGCATCCATCACAACGCTCATACGATTATTTCAGGCGATTTTATTCTCCTCCTGATCGAACAGCACGAAGAAAACACACACCAGAAAACTATATGAACTGTCATTCAAACTAGGCGACTCGGAGGCCGCCACGCAACTCGCTGAAATCACCGCACGCTGTCACAAACGAGGAGGACCTTGACCTCGACAAGAAGGAGCTCGCGGATGATGCTCTTGCTGCCTTCTTCCTCCTCGGGTTCTTGGGGCCTCTCGGGATGTCATGGCAGCAGGAGGCGGCCTCCTGGCCGGATTTGTCTGTGCAGACTTCTGTTGGGAGCGTGGCTCTTGGTGGTTTGTCAAAATCTTGAGATGCCCAGGATGTCTTCCTTGACTGTGCAAAGGAGCCCATGGAGCCTGCTGACAACTCTTCCAATCCTCTGAATTCACTCATCCAGCTTGGGCATGAATCACTAGTGCCCACGCCTATGTGAGACACATGCCTGACGTCTGTAGGGCACCCGATTTCCATCTCTTGTTGCTTCTGCAGTGCGAATATTTGAGAGATTATCTTCAAACCTTTGAATATCCCCTTCATCTTTATCTCCATTGGTGAGGTGCCTCAGTACTCCAAACAAAGAAAGAACATAAGTGTCCTGAAGGAAATACTCACGAACTAGTGTATTACTTTGCCATGCACATATCTAAGCATCAGTTAATCTTCAGAATGTGGGGTAGCAGAGTTCATGCATGGAGACCAAGATCATACACTGCATGAATTTGTGTATGACTGCTGATCAGAATAGGGAGTCACTTCCAAGGTGAATGGCTTTATTGACTGTGAACTAGAACTTGTCAGCAGGCAGCCATTTTTGCCCCTACACTGGTTTGCAGTTTTCTCCTATCGCAGAAGCAACCAGCCCTGCTTCCTAATTATTGGACACACTACACACCAGAAAGAGGGATGAGAAGGAACAGAATGGGCTGAGAGAGTGTGAGAATAAGAGTAAGCTCAAGACTACTTAAATAAAGGTGACAACTAACAAGTTAGCTGGCTTTTCCTATTCCAAAAGTCTGCTGTCATCTCATTTGGGCCATTTCATAAGACAGGTGTATATTTGATAACATGTGATGTTTTAGCTGTTCTTGATCTTAATGTTCAAGGATTACTTTATCGTGAGCTTAAATATGCCATTTCTCCCTAAACATTTTCTTGCTAGCGCTTAATTTCTGCATGATCTGCTCCAGATAGTTGCATATTACCAATGCAAAAGATTTGTTGCATAGTCACTCTCACATGCTGCTGTCTTTGACAAGTTACCATAAGTATTCTGGGCCAGTCTCCACCAAATAGAATGGAACGAAATGTTGGATCTATGTGATACACATTTTACATGCACAATAGCTTGATCTACCTGAATTCCTTTGTGCCCTCCAGTAACATCCTAAATTTACTCAAAATCATCCAAGCAAGCTACTTGCATGAGTATGGACTGAAGAAGAAAATGAAGTGCCGGAGCAAGTGCACCTGCCTAGTTTTCACTTGGCATGAAAAGAGAATACAGCCTTGCTTGAGGTAGATTAGATCCTTAAAAGCTGAGTTTTGCTCAAATCTGTCCTCTATTAATGCATGGGGTCTGATGGTCCTATTTCCTTTTAATCATCAAACAACCAAATGTTTGGTTATAAAGTATGGTCTTGACCTTGAACTGTAAAAATTAAGGTAATAACCTCTATGTACTTGGCCGTGCCTAATTATTTTGGGTAGAATACATTGGAATAGAGAATGTTATAGACTCATAATATTGAAGATAAAGCTTGTAGAAAAATGAATGGCAATCATTAACAGTTAGATGAAAAATACCACTACCTCGTCCCAAAACGGACCACATTAAATTTGGACCAAAGATATTATCTGAAGCGTACACTTAGATATAGGAAAACCATATAAGCATTTTTCTTAACTAAAAATATTTCCATGCTGCTATCATACTTTATCTTTTTATCAACTTAAATTAAATTCAGTGGTCCCGTAGCAACCTATGTTTGACACCTAAGTGTAGTTGTGAGCAGACTTAATTCTTTTTTCTGTGGATCATAGGTTTTGCTTACCTAGTCTGGTTCTTACTTTCAGTTCAACATCAGCAACAAATTTTTTGGGTGCTAGTACTTCTCTGGGCTTTGCCTATTAAATCTGTACTCTTTGAGATATTAAAGGCGTAACAGATAGGAAACCTGCAAACACTAAGAGTTAAGCTGGAATCGTCCCCAGTGACACCATGCCTGTACTCTTGTTGCTTACTAAAAAAGCAGGGTGTAAAGCCTTTTCTCTAAACAAGATACTAACTAAGAAAATAGAACATAAAACAATATAGAACTTCACTGTTGTTATATAAGGACTTCATGGAACTGCTTGTCTTCATTAGTACCTTGCCAGGATTTCAGGCTTCATAAGCTGCAGGTACCTTGCAAATATAGAAGTTGCATATCCAAAACAGATTTCAGAACATCATTGTTCCTCATTTGCATAGTGATTTGGTCTACGTCCCTTAATATAATTTCAAATCGACCAAAAGGGACACCTGAAGCTCGGCTGTCTCTCAATTCCTCGCATAGTATCTGAACTCAACTAATAGAGTATCGCTGACACTGGGTTAAATCGGTTGCCAAGGGCATGTTCAGACTTCAGAGAATTAGCGCACACTTGGAGCACTGTATCACTATCTGCAGGTGGTGGGATAAGGGATATCGAGGCCTCTTCGGCTGATTACAGCTTGAGCCCGCCGCACCGCCGCGCCCCGGAGGTGGCCGGCAGCACGCGGGGACACGGCGGCGACCGTGGGGGCGGGACGGCTAGCCGGAGCACGGAGGCCATGCATGGAAGGAATACCTAGGTAGACGTAGGCCATACGCCGGCGATCCGATACGGCGAGGCCGCGGGAGGGGAAACCCCGACGTGCTCCAGGCTCGCCGGAGCTCCGCCGCCTCGCCGCCGAGGGGAGGTATAGGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0358200.1 | 6 | 28391292 | T | C |
| Osa06LNT0358200.1 | 6 | 28392983 | C | T |
| Osa06LNT0358200.1 | 6 | 28394869 | A | T |
| Osa06LNT0358200.1 | 6 | 28393815 | T | G |
| Osa06LNT0358200.1 | 6 | 28393446 | T | C |
| Osa06LNT0358200.1 | 6 | 28390478 | A | G |
| Osa06LNT0358200.1 | 6 | 28390656 | G | A |
| Osa06LNT0358200.1 | 6 | 28390775 | C | T |
| Osa06LNT0358200.1 | 6 | 28390829 | T | C |
| Osa06LNT0358200.1 | 6 | 28391243 | A | G |
| Osa06LNT0358200.1 | 6 | 28391688 | G | T |
| Osa06LNT0358200.1 | 6 | 28394056 | T | C |
| Osa06LNT0358200.1 | 6 | 28394304 | A | G |
| Osa06LNT0358200.1 | 6 | 28394346 | C | T |
| Osa06LNT0358200.1 | 6 | 28395700 | A | G |
| Osa06LNT0358200.1 | 6 | 28394454 | A | G |
| Osa06LNT0358200.1 | 6 | 28395441 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0358200.1 | osa-miR5795 | Cleavage | 3.5 | 23.046 | 1 | 22 |
| Osa06LNT0358200.1 | osa-miR6245 | Cleavage | 4.5 | 22.863 | 1 | 21 |
| Osa06LNT0358200.1 | osa-miR530-5p | Translation | 3.5 | 18.402 | 1 | 20 |
| Osa06LNT0358200.1 | osa-miR1429-5p | Cleavage | 3.5 | 18.819 | 1 | 21 |
| Osa06LNT0358200.1 | osa-miR1879 | Cleavage | 5.0 | 10.11 | 1 | 24 |
| Osa06LNT0358200.1 | osa-miR1879 | Cleavage | 4.5 | 14.184 | 1 | 24 |
| Osa06LNT0358200.1 | osa-miR1879 | Translation | 4.5 | 10.555 | 1 | 24 |
| Osa06LNT0358200.1 | osa-miR2871a-3p | Cleavage | 4.5 | 13.168 | 1 | 21 |
| Osa06LNT0358200.1 | osa-miR2871b | Cleavage | 4.5 | 13.168 | 1 | 21 |
| Osa06LNT0358200.1 | osa-miR2875 | Cleavage | 5.0 | 20.835 | 1 | 24 |
| Osa06LNT0358200.1 | osa-miR2931 | Cleavage | 4.5 | 20.641 | 1 | 20 |
| Osa06LNT0358200.1 | osa-miR2931 | Cleavage | 5.0 | 12.428 | 1 | 20 |
| Osa06LNT0358200.1 | osa-miR5076 | Translation | 5.0 | 18.074 | 1 | 22 |
| Osa06LNT0358200.1 | osa-miR5079a | Cleavage | 5.0 | 16.181 | 1 | 22 |
| Osa06LNT0358200.1 | osa-miR5149 | Cleavage | 4.5 | 13.851 | 1 | 22 |
| Osa06LNT0358200.1 | osa-miR5498 | Translation | 5.0 | 22.068 | 1 | 21 |
| Osa06LNT0358200.1 | osa-miR1429-5p | Translation | 4.5 | 17.981 | 1 | 21 |
| Osa06LNT0358200.1 | osa-miR5079b | Cleavage | 5.0 | 16.181 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0358200.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Osa06LNT0358200.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0358200.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0358200.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0358200.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)