© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0358300.1
CGACGATTAGGGGCAATTGTTATTAGTCAAACATTTACCGAGTTATTTTTTTCTTGTAAAAGAACACCCTATAAACTGTGACAAGGAGTAATAAGTTTCCGGGCAGGAGTAGAGAATGAAGAGTACATACGATACATGAGCTGATACTGCTAGCAGACAGGAGTACATTTTTTTCATACTACACATCATCCAGATCCAGTTATTGCAGGAAGGCATCTCAACACCACGAACACAGCATTCCATGCGAGATAGGACTGGCACGATTCAGGAAGGTCGTATACATCAGGAGGATTCAGGGAGGTCGTCACATCAGGAAGAAGGGCGAGCCGATTCCGAATAAGGGAGAGTTGCAGACTCCACGCATGTTGAAGCCTCGGAGACGCTCCAGGTTCATCACGTCGGAGTGATCCACGAACAGATTCACCCGTGGCCCGTATCTTCTGACGAACCACTCGGAGGTGTTGGGGTTGGAAGCCTCGAACATGGTCTTCTCGAGCCCGAGCCGGCCTACAATCTTGGCGACGATGTCTGCCCGTAGAGAGTCAGCGCGCTGGCAAATGTCGTCGGCATCGATCATGATCATGTCTGCCCCTGCTTCCAAGCACCTCTCGGCCCTCCTTATCAACAGGTCAACATCCTCGACTCTTTCTGAATTCTGCTTCACTGGAACTATGTATGCCCCAAATGCCCTATCTCCAGATGGAGGAATATCAGAACTGTCAAACTTCACTGAAAACAGGGGCTTTGCTTGCAAACCACTAGTCTTGATGAGGCGGACTAATCTCAGGAGAGCTTCTTCCGGGAGCTTGAGAGATCCAGCATTCAGCTCGATGGTGTCAAATCCTAATGCCTTGCACTCCTCGACATATTGCTTGAAAAAAGAAGGTCCTTGACGCAGAAGATGCTCTGCCCAATCTCCTGTACTCACATATATGTCATGCTTGTGTGCTAAATCAGTAATCTCTCTAACCAGTTCTTTTCCCATCAAACTATGAGATCCACCAGTAAACTTCAAACCATCAACAAAAGGACCTAGAGAATCCAATATTTCCTGAAATAGAACAGGAAATGACAGCCTTGAGAACGAGCTGTTTTATTCCTTGAAATCCCTAACCAGGAGGTTCATTCTGTTTTCAAGTGATGTACTCCTATCTAGATTCTAGAATTTTCTTCATTTGAAAGGAAACAGTAATATAAAATCTTCCTAGTCACAGCTTCAATGCAGCAATAAAGTAGCCAGAAAGTTCATTTGCATTGCAAGTAAGCATCCTCAATTCTCAAATTCTCAAATGGCATTAAGCACTTCATATAATCACGGGACCATGCTATGTCGACATAAGAGGGAACAGCTTGGTTAAGAATCTAACTGATAAAACTAGCTGTAGCTGCTACGCATTCTGACATCCACAAATGTACCACTTGATCTACAAACTGACACTGATCGTTGATCGCACAGACTGAAGATTCCAATATGGTGGCCCTGTTTAGGAATTAACAAATAAACAATCAAGTCACGAAGAATTATGCAGCAGATAGGGCTTCATTTCAAACACGATTCGGTGGGAATCAGAACGCGATTAAAAGTTAAAACTACACCAAATTCCACAACCCAGCAGCGATTCGTAGAAGCATGAAACAAAAATGGGGATGGATTAGGCGGGGGGCTCTCCGAGAACCTGGAGCGCGTGGTGGGCGGGGCGGAAGGCGTAGAAGGGGCTCCTCATCTCCGTCACCCCGTACCGCCGCGGCTTCTCCGGCCGGTCGTCGTCCCCGTCGCCGAATCCGCACCCGCGCAGCGACAGCGCCACCGCATCCTCTCTCCACCGCCGCATCGCCATCTTCTCCGGCGAACTTAGCTCTCGCTCTCCCTCTCGTTGTCGCTGCCACCTGATCGAGCGATAAAAAGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0358300.1 | 6 | 28463958 | A | G |
| Osa06LNT0358300.1 | 6 | 28466054 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0358300.1 | osa-miR7692-3p | Cleavage | 5.0 | 14.381 | 1 | 24 |
| Osa06LNT0358300.1 | osa-miR156j-3p | Translation | 4.0 | 17.036 | 1 | 22 |
| Osa06LNT0358300.1 | osa-miR166h-5p | Translation | 5.0 | 22.862 | 1 | 21 |
| Osa06LNT0358300.1 | osa-miR419 | Cleavage | 4.5 | 23.487 | 1 | 21 |
| Osa06LNT0358300.1 | osa-miR1425-3p | Cleavage | 5.0 | 15.887 | 1 | 21 |
| Osa06LNT0358300.1 | osa-miR1853-3p | Cleavage | 4.5 | 10.52 | 1 | 22 |
| Osa06LNT0358300.1 | osa-miR2118f | Translation | 5.0 | 20.029 | 1 | 22 |
| Osa06LNT0358300.1 | osa-miR2118j | Translation | 5.0 | 20.029 | 1 | 22 |
| Osa06LNT0358300.1 | osa-miR2118m | Translation | 5.0 | 20.029 | 1 | 22 |
| Osa06LNT0358300.1 | osa-miR5152-5p | Cleavage | 4.0 | 18.054 | 1 | 21 |
| Osa06LNT0358300.1 | osa-miR5506 | Cleavage | 4.0 | 23.657 | 1 | 21 |
| Osa06LNT0358300.1 | osa-miR5506 | Translation | 4.5 | 9.311 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0358300.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0358300.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0358300.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0358300.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0358300.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)