© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0358800.1
GAGGATCAAGAAGAATACCCATTGATTGAAACAGTCAACATGTGAAGTTACAAAAGCTAGTAGGCAACCATCACAAAAATATTTGCCATGTTTTCACGAATCTGACAAGCACAATTGGAAATACATCGAGCAGGGCATGCATGTAGCGTCACGAAAAACTTCGATAAAGAGCAGACTGCAAATAACCTACTCCTAAATTTAAACCACACGAGCGACGAAGCTAAACAAACGTGGCGTAGATTGATTACCGCCTCCTCATGCCCCTTCCACCACGGCCCCGCATCGCTCCTCCGCCACGGCCAGCCATCGCGCTAGCAGCCGCATCACCTTGCGCACTTTCAGACTTGGGATTTTTAACTGTCTCATCCACGCTGAGAATAAGGCAAGCAGCTTCAGTTGCAGCATTTATAGCATTGATCTTCACAACAGCAGGTTCCCAGACAAAGTTAGCAAAGGAATCAGCAATTCCACCAGTGTTGATGTCCACACCAAAATTAGCACCTTCACCAGATGCATGTTTCTGTCGGAGCTTATTGAGTACATCAGTTGCATCAAATCCAGCATTGTCACAAAGTTGTCTTGGAATAACCTCGAGGGCTTTAGCAAATGAGTTTACGAAGAATTGAGACTTCCCAGCTATGGTACGTGCATGCTGTCTGAGGTACTTGCTTATTTCCATATCAATAGCACCACCACCAGGTACAACTGTTGAGTTCTTAAGAGCTCTTCTAACAATCATGATGGCATCGTGGAGGCTCCTTTCTGCTTCCTCGATGAACTGATCTGCACCACCACGAAGGACTATGGTTGCTGTTTGACCAGAAGGGCAACCACTAAATATATTGAACCGTTCATTGCCCACTTGCCTTTCCTCGAAAACTTCGCAAGTACCAAGTACCTCATCAATGACATTATTCACTGATGTCTGAACGGTACCACCTGTTGCTGCTGCAACACGTTGTAAATCCTCTTCTGCAACACGGCCAGCACAGAAAATGTCCCGGTCTGCAAAATACTGTGTTGCAAGATCACCAATTGCCAACCGAGAAAGGACTATCTTTGCCCCACTTTTGACACATTTATCCAACTTGTCATAAATGATATTCCATTCAGCATCGACGATTGATTGGTATTGTAAAGGGTCAGACAATCTGATTTCTGCATTTTCTTTCTCAGATTTCAATTCTAGTTCTATGTTCAGCAAAAGAATCTTTGGACTCAAGAACTTCTTTGGCTGTTGCTCAAATCCAGCATAGGAAAATGTCTTCTTGAAGGCAACACCGTTAACAAGGAAGGAATCTCTCATGGTGCCTCCAGGAACCTTTTTTATTCCAAGAAGGTTAAGTCTGTCATCATTGCTAATGGCAAGAACAGCATCCACAACCATAGATGCAAAAAATTCTTTCTCGCCACCTATCAACTTTGATGAGAGTGTTGTTGCAGCACACTTGGCTAGCAATTCCTTCTTTTCCTCAAGGCTTTTCCCTTCAATGCTAGTGGCCAAGTCTTTGACCTTTTCAATTGCCAAATGGCCAGCAGTCCTATAACTGCGAATTAGACTATGCGGATGTACTCCGTCCTCAATGTAAGGTTTTGCTTCTTTCAGGAACTCAGCAGCAAGAAGCACCACTGTGGTAGTTCCATCACCAACCTCGGAGTCCTGGGACTTGGCGATGTCGACGAGGATCTTGGCGGCGGGGTGGATGATGTCGAGGAGGCGCATGATGGTGGCGCCGTCGTTGGAGATGGTGGTGCCGCCCTTGTCGTCGTGGATGAGCTTGTCCATGCCGCGTGGCCCCAGCGTGGTGCGCACCGTGTCCGCCACCACCGTGCACGCGTTGATGTTGCTCACCACCTGCGCGCGCCCCTGCGACGTGTCCGTCCCCTCCTTCAGCAGGATGATCTGCGGTTGCATCATGGACGCCATGGCGAGGAGCTCGCGGTTTCGGGGGGATTTGGTGGCGGGGAGATGGAGATCTGAGGTGGCGGCGGAGGGGGAGGGGGAGGGGGAGGAGAGCAGCGAGGGTTTTTCTCGATCGCTCGTTTTGAGAGGGCGGCGGCGGCGCGGGGAAGGCGAGAGTTCTAGGAGGCCCCCCGGGTGCCGAATGACCTTGCCCTTGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0358800.1 | 6 | 28683224 | A | G |
| Osa06LNT0358800.1 | 6 | 28683558 | C | T |
| Osa06LNT0358800.1 | 6 | 28682348 | T | C |
| Osa06LNT0358800.1 | 6 | 28683079 | C | A |
| Osa06LNT0358800.1 | 6 | 28685864 | A | G |
| Osa06LNT0358800.1 | 6 | 28685921 | C | T |
| Osa06LNT0358800.1 | 6 | 28686091 | T | C |
| Osa06LNT0358800.1 | 6 | 28686834 | C | T |
| Osa06LNT0358800.1 | 6 | 28683777 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0358800.1 | osa-miR5813 | Cleavage | 4.0 | 19.811 | 1 | 22 |
| Osa06LNT0358800.1 | osa-miR5816 | Cleavage | 5.0 | 15.345 | 1 | 24 |
| Osa06LNT0358800.1 | osa-miR395b | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395d | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395e | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395g | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395h | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395i | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395j | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395k | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395l | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395s | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395t | Cleavage | 3.5 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR167d-5p | Translation | 5.0 | 18.832 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR167e-5p | Translation | 5.0 | 18.832 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR167f | Translation | 5.0 | 18.832 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR167g | Translation | 5.0 | 18.832 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR167h-5p | Translation | 5.0 | 18.832 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR167i-5p | Translation | 5.0 | 18.832 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR171f-5p | Translation | 3.5 | 10.229 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR167j | Translation | 5.0 | 18.832 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR528-5p | Cleavage | 2.0 | 16.252 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395m | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395n | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395p | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395q | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395r | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR395y | Cleavage | 4.0 | 15.675 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR528-5p | Translation | 5.0 | 11.401 | 1 | 21 |
| Osa06LNT0358800.1 | osa-miR1863b.2 | Cleavage | 4.5 | 14.712 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0358800.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0358800.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0358800.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Osa06LNT0358800.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0358800.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)