© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0359000.1
GCTCTGCAATAACATTCAGTATCAGGCAATGGCTAACTCTGAACTCTTCAATCCATTTTTGGGAATTCCCTGGCAGGTGACAAATCTGTGGATGTTGTTTTGGATCATCGCTTCTTCCATCCTGGGGAAATTTGTTTTCAGAAACATGTGAAGTGCTGCATGTAGGATCTCCTGATCTGTGCAATGGAAGCGCATTAAACAAATCAGCCTTCACATCCTCAGGTAATTCCTGAAGAACTGTGACGTCTGCCTGGCTTAAAGAATTTGGCATGAAATCATGCTGTATGACACTTTTAGTTGGTATATCAACCAATTCACTGGCTATTGAACGTGGAGCATTGGCTTGTTTTAATTCAGAGAGTTGTTCACCTGAAGGCCCCTTAATATCTGCCTCCTTTTTAAAATGTATGGAGTCTTTGTGCTTTCCATCTCCATGCAGCTTCGTGTCAAGAACAGGCACAAGATTCTGATCAACTGCTGGAAAAACAAGAGATTTTGTATTGCTTTCCTTGGCTTTGTCACCACTGGTTATCCCCAGAAAACCATGCAATTCTCCCTTGTACATGTCATTCATCTCATATATTATCTCTGGAGGAAGGTTCTTTAGGACCTCCAAATCAAGTTCGGACAATGGTGGCAGCTCAACACCAACTCGAGTGGACCTGTCACTTGGAGGGTTCACTTCTGATGAACGAGAAGTCCCTCCTATACCTGATGGTCTGATACTTCCAAAACCTCTCCGCTCGCTAGTTGCTGCATCATCACGATTTTTGAGCAAGCAAGCTTTCTCGGTGCTGTGTTTCTTGAGCTTGTCAGATGGTGAAGCAAGCCAAGATTCAAGCATATTCCCTTGTGGTGCTCCCCGAGCCAAATCTGCATGCTCAAGCCTTGAAATTTTTAGTCCTACTCCCCGAACTTCCTTCACATCAACACAGAATGATGAGAATAACTGTTTTGCGATTCTCTGAAGGGTGACTGGATTGTCAGTTGCACCTGCAATCGTCATAGATCGACTAACAGTTTCACAGTCACCACATCCCATAAACTTGATTGGCTCTCCAGCACCTTTCCTTCTTGTTTTCAACTTAAGGGTAATAGTACGACCCTGCACTCCACAACCTTCCAAGCGTAGACAAACCTCCTTGCTGAGGTTGACAAGAAAATTCTCAGCATCTTTGTTATCATTAAATCTGACTCCCCAATTGACTTCAGCACCGACAGATTTTGTTTCCTGAACAGCTTCAACAACTGAATGATCAATTCCTCTGCAATAGTTCCATAACATGTCACCAATTTTTTTACCAAAATCCTTATGGAGAGATTCCTTTGGAATGTTGCGAAGCTGGCCGCAGTATTCCACTTCTTTGCTCTTTAGTTTATCTGAAACAGTATGACCAATGCCTGGGAGTGCTTTGATAGAAAGAGTATTTAAATATCCATCAACCTTCTCAGAGGAAATAAAACACTGTCCATTTGGCTTTGCAGATCTGGTAGCTAAACGAGCTATGAGCATGTTTCCAGAAATACCTGCACTAGCAGAGCACTTTGTTGTACCAAAAATCTCATTCCTTATTTTCTGTGTTACTTCCTCTGGATTATCATGTAAGCATTCGGTCATATCCAGGAAAGCTTCATCACAACTCAAAGCCTGAACCTTACTGCAATATTTATGCAAAATACCATAGAACTGGTCAGCAACCTCCCCATATGCATCGAAGTCATACGGAACAATCATTAGGTGGGGGCACCGAGCCTTGGCTTCTCTAACAAACATGCCAGCCTTTATCCCATAATTTCGTGCAGGATAGTTTGCAGATGATATTTCCGCAGTTCCCTTAGGATTGTCAGAATGACAAACTGCTACTGGTTTGTCATGCAGCTCTGGCTTATTTCTGATGACAACTGATACAAAAAAGCAGTCCATATCAATATGAATGATCGTGTTATTCTTCCCTGAATGATCACGGTTCCCCTTACTGCTTTTATCACCTAGTAAATTTGAGAAGCGCTTGCGGTATCGATTTCTCCAGGTCCCAATGAAATGCAGTCGAGAATACTTGAAATAGTTCTCTACAAAATTTGGATCTGTGAGGGTTGAATGTGTCCGACTAGAAGATTTAGTTGCATTTCTATCCAACGAATCCAATGACAAATGACTGCCCGTAGAGCTTGTACTGCACAAATTTGAACACCTTGACCTAATATCTGGGGACTCAGCAACATGAAGTTTACCATCCATGTCATTATCCCTCCTCTCTGAACATGCTGTTTCATAAGCATTACCAGCCTCATCAACAAAGTCTTCACTATCTTGTTCTTCAAACATTGAAGCTTTATGATCATCAGAGGATAGTGAGTCCTTTGATGCCTCCTCCTTCAATAGTGACCCTTCCTTTTCACAACCACTGTTATGGTCTTGTGATCCCTCCTGAACAGAAGAAGATTGTAGCTCATGGGAATTGCTTTGATCATTTAGTTCCCCCTGATAATGTCTCCCAGAAAAGAAAGAAGAAAGCTTCGTCTGCTTTCGGCTTGAAGAATTATGCTGACTTATTTGATACGGGACGCCTTAGTGAAAAATAAGAAAACAAAAAAAAATGCCATAAGAACAAGTGGATTAATATGAGTGGATACAAACTACATATATCACAAGAAATCATGCAAAGTGGCTATACATATAGAAGTAGCAACAGCGCAAGCTCACATCATGATTAAATTGTTTAGTCGACTAATTTGGTTAATTGTGCTTGCTCCAGACAGATAAATTGGGCATTTCAGCTACATGTCAATAAATTTTAATTTTGAAGAGAAGTATTTATGTCCAAAGAAGTAGTATGAAGTATCACGACTTAGAATAAAAGGTTTCAGGCAGATGTCAATAACCAAACCTGTTCAATAGGACCAAAAGAATAGTGGTAAAAAAATCAGAAAAGTACTTTTTCATTGCACTGATGTGAGCCAACCCAATCAAGCCTATGACTAACAGATTTATAGCAAGACATGGTTTTATCTAAGTTCACAGGCTCGAGCAATACCGTACAACTTACAACTCAATCAGACCTATTATTAACAAATGTAGTGCCAACGACATGGTTTTAGTTAAGTTCGTGAACTCGAGCAAAACCGCAACAGCAAAGCATATCATTCAGCTAACCAGCAGTAAACTGTTAGTAAGGGAAGGTGAACTGAAACTACAGCTGAGGAGTCTGTTCTCTGCAAGGGAATCCACCACCCAGGCTGGCTTGACCACTGGAAGTCCCTTACTGAATGCTCTCAGATTACTCATTTTGCTATTTGGCAGATGGGTGCAGATGATGTGCGTCACCGTATTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0359000.1 | 6 | 28808373 | T | C |
| Osa06LNT0359000.1 | 6 | 28808488 | C | T |
| Osa06LNT0359000.1 | 6 | 28808585 | C | G |
| Osa06LNT0359000.1 | 6 | 28810505 | T | C |
| Osa06LNT0359000.1 | 6 | 28810727 | G | C |
| Osa06LNT0359000.1 | 6 | 28810896 | T | A |
| Osa06LNT0359000.1 | 6 | 28811055 | T | C |
| Osa06LNT0359000.1 | 6 | 28812168 | T | C |
| Osa06LNT0359000.1 | 6 | 28808580 | T | C |
| Osa06LNT0359000.1 | 6 | 28812625 | A | G |
| Osa06LNT0359000.1 | 6 | 28812665 | T | A |
| Osa06LNT0359000.1 | 6 | 28813157 | T | C |
| Osa06LNT0359000.1 | 6 | 28813200 | C | T |
| Osa06LNT0359000.1 | 6 | 28813603 | T | C |
| Osa06LNT0359000.1 | 6 | 28813760 | C | T |
| Osa06LNT0359000.1 | 6 | 28813821 | T | G |
| Osa06LNT0359000.1 | 6 | 28814786 | G | A |
| Osa06LNT0359000.1 | 6 | 28808568 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0359000.1 | osa-miR5543 | Cleavage | 5.0 | 13.355 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR5837.1 | Translation | 5.0 | 17.673 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR6251 | Cleavage | 3.0 | 12.717 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR172a | Cleavage | 3.0 | 13.45 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR172b | Cleavage | 3.5 | 13.45 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR172c | Cleavage | 4.0 | 13.45 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR171h | Translation | 5.0 | 16.456 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR172d-3p | Cleavage | 3.0 | 13.45 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR815a | Cleavage | 4.5 | 16.396 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR815a | Translation | 4.5 | 17.114 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR815b | Cleavage | 4.5 | 16.396 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR815b | Translation | 4.5 | 17.114 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR815c | Cleavage | 4.5 | 16.396 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR815c | Translation | 4.5 | 17.114 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR1429-3p | Cleavage | 5.0 | 13.855 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR810b.2 | Cleavage | 4.0 | 19.045 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR2878-3p | Cleavage | 5.0 | 14.232 | 1 | 24 |
| Osa06LNT0359000.1 | osa-miR5337a | Cleavage | 4.5 | 12.957 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR5489 | Cleavage | 3.5 | 17.159 | 1 | 21 |
| Osa06LNT0359000.1 | osa-miR5499 | Translation | 4.5 | 14.448 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0359000.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0359000.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0359000.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Osa06LNT0359000.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)