© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0033200.2
GTGAGTATGTCACTATCAAGAATTCAGCGGTGTCCTTTTTTCAACTGATAATGTGACATTGTGGAGCCTGTACAGGTACATGTGAAAAGCATCCAAACAAAAAAAGAATAGTATAAAGGACAACTGGGCATAATTGCCTAATCATCCAAGAAAAGAGAAAGATAAACAGGGAAGTAGGTTTTTTACATCTCCAACCACTGTTGTTTTACTAAGATACAGAAAAGAAGTTGTTATTCGTAGGGCCAAAACCTATGGCATGACACACTGCCATGACGGTTCACGAAGTTCATCCAATAATTTGAACCACCAATTTTTTTATTTTGAATCTACTATTCCCCCTGTTCCAAAATATAGCAACTTAGTAATCGATTAGACATGTTGCTATATTTTAGGACGGGGTGACGGGGGGAGTATATAAGAAGAACAGCATGTTTGATACATCAAGGCCCTTGTTTTTTTCTTATATCTGTAGATGAAATATCCATGCGAAACTTCTCCTCTGGTATAGAGATAAACATTTCCCTTAACTCGACTGGAATGTCCAAATCTTCAAGGACCTTGAAAACTCCTTCAATATTTCGACCACCAACAAGAAATGTTGTACCTGTGTTTTTACATTCGAGAAGTATCTCTAGCATTCTATTGTAATCACCTCCATAATACTTAGGATTAACAAGCCTAGCTGCAGTGTCTGCACCGATTACAAATGCACTGCCTGGAAATAGCTCCGCTTTCTTGTAAAAGTATGGTTGGTTAGATATTATCACATTCTTCCTTTTCTAAATTGCTCAACCCGGCGCTTGATTTCTGCGATAGATAGTGGAGGTTTGTCGGCATTGATTGCTGATATCTCAAAGCATGGAAGACCATCATCACACATGCTTGATGCAACTTCTAACAGCCTAAGGTGTCCATCATGCAGGGGATTGAATGAACCAGGTAGAATTATTTTCCTGTTGAAGTTTTTATCCATTGAATCAGAAAAGTGATACACTTTCATGCAGACTTGCCCATCAATAACTTGCTGGAGTTCTTGGTCTTCATCAAATTGTTCCACGCTTTCTTTTGGAAGTTCAGGTTCTTGAACATCTGACTGAATGGTTGCAGGAACTTTGCAGCCGTCTGCAATTGCCTGCAACACAGTATATTCTTACAACGGAGAACTAACTGGAAGAATACCAATTAGCAAGAAGGTTGGCCTATCCTGACGGGATTGGTTGATTGTATAGCTGAATCATGACCAAGTGAAAGGTTTGGTCAATTGTACTAGGTTATCATGAAGTCCAACTCAAGTGCATGTTGCCAGTGATGACATAAATATGTGTGACAGTGTGAGTACACCTAGTTATACATAACAAACCTTGAGCAGAAAGTAGCTTGAAACTTTATCTTCTTCCTCTCTGCTCCGTAAACCCTTTGACAATGTAACATGTGATGTCCTGAGGCAATTTTGTGTTCGTGTTGACACATAGAACCTATGCTCACCATGTTTTGGACGTGAGCTAGCCAGTGACCCAGTGAAGCCAACACCCATTACTTGTAGACCTGGTCCAGAAAGCTTGAGGGCGCGGTTGAACGCGGCCAATGCCATGTCCTCTGCGGCCTGCTTGCTGGTGAACTGCAAGGGCATCTTGCCGAGCAGCTGCGCCATGGAGGCCATGGAGTAGGGCACGACGACCTCGAGGACGGTGCCGGACGCGCCGGGCACGGACAGCAGCCACCCGAGCGCCTGCGAGGCGCCGCCGGCGAGGTAGATGACGGCCTGGGCGCGAGATGAGTGGATAGCCTCCACCACCGCGCGGACCCAGCTCTCCATCGCGCAGCCGCGAGAAGAAGCTACCAGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0033200.2 | 1 | 28541705 | T | C |
| Osa01LNT0033200.2 | 1 | 28541777 | A | T |
| Osa01LNT0033200.2 | 1 | 28542078 | T | A |
| Osa01LNT0033200.2 | 1 | 28543024 | A | G |
| Osa01LNT0033200.2 | 1 | 28543179 | T | G |
| Osa01LNT0033200.2 | 1 | 28543643 | C | G |
| Osa01LNT0033200.2 | 1 | 28544378 | A | G |
| Osa01LNT0033200.2 | 1 | 28544871 | T | C |
| Osa01LNT0033200.2 | 1 | 28545190 | A | T |
| Osa01LNT0033200.2 | 1 | 28542729 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0033200.2 | osa-miR396e-5p | Cleavage | 4.5 | 20.986 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR444a-3p.2 | Translation | 5.0 | 24.926 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR444a-3p.1 | Cleavage | 5.0 | 24.206 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR444d.2 | Translation | 5.0 | 24.926 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR444d.1 | Cleavage | 5.0 | 24.206 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR444e | Translation | 5.0 | 24.926 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR1862d | Cleavage | 4.0 | 16.53 | 1 | 24 |
| Osa01LNT0033200.2 | osa-miR1862d | Cleavage | 4.5 | 17.828 | 1 | 24 |
| Osa01LNT0033200.2 | osa-miR1862e | Cleavage | 5.0 | 17.603 | 1 | 24 |
| Osa01LNT0033200.2 | osa-miR396g | Cleavage | 4.5 | 20.986 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR396h | Cleavage | 4.5 | 20.986 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR396d | Cleavage | 4.5 | 20.986 | 1 | 21 |
| Osa01LNT0033200.2 | osa-miR6256 | Translation | 5.0 | 17.457 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0033200.2 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0033200.2 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0033200.2 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0033200.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0033200.2 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0033200.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0033200.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)