>Osa01LNT0033300.1

GCGAGGACGACGACGACCCCTCGCCGCGGGGCAGCAGCAGGCGCCGGATCCCCCGCCGTCGCTCCCCGTCGGCCGAGACGACGCCGCCGCCGCCGCGGCGGTCGCCGGCCATCAGGCGCGCAGAGAGGTAGGTGGAGGGGCAGTAATGGCAGCGCGGAAGCCGGGGGTGCGTGGAGGAGAGAAGGGGAGAGGAGCGCCGCGCCTCCCGTCCGCGCGTGTGCGCTTCAGCGTTTGGCTTTGTTGCGTAGTGTACTAGTAGAAGAGTAGAGAGAAAGAAGTCTGTGCGAGACAGCGGAGACTAGAGATGTTGTAGAGAGAGAGAGAGAGAGCGCGAACGAGTGGAAGGGTGGCAAACTGGCAACTGGCAAGGCGACGAGGGAGGGGTGGAAGCAGCACGAGGAAATGAGATGTGGTGACTGGTGAGTGAATTCTTGTCGCGGGTTCGGT

Explanation	CPC Score
noncoding	-1.24341

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa01LNT0033300.1	osa-miR156b-3p	Cleavage	4.5	11.447	1	21
Osa01LNT0033300.1	osa-miR413	Translation	5.0	17.514	1	21
Osa01LNT0033300.1	osa-miR3979-5p	Translation	4.5	12.193	1	20

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa01LNT0033300.1	1	An10	Morphological trait	Panicle/flower	nan	nan
Osa01LNT0033300.1	1	brt1d	Resistance or Tolerance	Drought tolerance	C742	C904
Osa01LNT0033300.1	1	rfw1b	Resistance or Tolerance	Drought tolerance	C813	C955
Osa01LNT0033300.1	1	qLRC-1	Resistance or Tolerance	Drought tolerance	RM237	RM302
Osa01LNT0033300.1	1	yld1.1	Physiological trait	Source activity	RM5	RG462
Osa01LNT0033300.1	1	nan	Morphological trait	Root	RM3475	RM3494
Osa01LNT0033300.1	1	QPh1b	Resistance or Tolerance	Submergency tolerance	RZ527	RZ154
Osa01LNT0033300.1	1	nan	Physiological trait	Source activity	RG532	RM472
Osa01LNT0033300.1	1	nan	Morphological trait	Seed	CDO118	CDO455

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus