© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0363500.2
AGACTGTAACCGGTGGGTGCGCCCGTATTATTCAATTCCCAAAGAGCAGAAATAATTTTATCTATACATCATGCATATCAAGGACAAGAAGTTTTTTTTTTCCTTCAGTAGATCGAGTTACAGATTGTTGCAGCAAATAATTAGCCTTTCGATTGATTGATTAATTAATTAATTAACAGTGCCTTTTAATTATAACTGCTCGATCAGCCACGCTGAGGCAGATTCTTTCTCTCTTCTCCTGGGGTAGTGCTCATCTTGTTTTCATTTCACATCCTGGAGTAGCCATCGTACTGATCCATGAAAGTGTCGTTGAACTTCTTGAAGCTGGTCATGATGGCAGGCATGTCCTCCTCAGCTGGCAGGATGGTCGTCCTCAGGTGGAACACCCCTTCTTTTTGTCCGAAACCTGACCCTGGAACAGTGGATATTCCAGTTGCTTCAAGAAGCTTGAGGCAGTAGAAAACATCGGCCGCTTTGCCAGCCCTTTTGGCTGCATCTATAGCTTTTGGTGGTAAGCGTATTTGGGGGAAAGAGTACATAGCTCCTTCTGTGAAATTGCAGACAACATTTCGGCAACTATTGAAACCATCTGTCATCAGGCGTGCTCTCCTCCTCAAAGACTCGAGGATAGACTTGCTTTCAGCAGAAAACTTCAGATAAGAGATATCTCCAGGCTTAGGAGGGTTAACCATTAAACCCATAAAGATCTGCCCAGGAACATTTGGACTGAGTGCGATTGATGCAACCTTGTAGATCTCGTCTACTGTCTTGGGAGGAAGATTTGTCATTTCAAAATACCCTCCACGTTGTCCACACTCCCCCCAATATCCTTTTGACACAGTATGGAAAGAAACCAGCTGAACTTCCCTGCTCATAGGAGGACCCATGTCAAACAGAACCTTTCTAGCACTTATAAATGGGCGCTCATCTTGATAAATGTTCTGTTGATAGACTTCATCTGCAAGCAGAACTAAGTTCTCATGGAAGCAGAATTTGAGAAGTTCCTTTATGTTTCCTTCACTAAGGCATTGGCCAGTAGGGTTTCCTGGGTTGATAATCACCATTGCTCGAACAGTGATTCCCTTTGACCGCGCTGACGCCACAGTCTGTCGGAGATTGACGAAGTCAAGTCCCCAGTTAGCCTCTTCTTCTAAGTAGTATGGCACGAGAGAACCACCAAAGAGGGAAATGGCAGCAGAATAAAGCGGGTATTGTGGAACAGGAACCAGAATCCCATCTCTCTCATTTCTGATAATGGTATTCAGCATTTGCATCACACCTTTGCTGGCACCATCTGTGAGGTAAATAAGTTCTGGATCACTTGGATAACCATCACGCCTCTCGATGAACTCGGCGACTTCCTTCCTAATACCAGGGATACCTCGGGAATCACTGTAAGCACCTAGTCCACCGGGTGCCATGGCGAGGTAGTGCTTGGCCCGCGCGATGGCGTCGGCGGGGAAGATAAGGCCGACGTTGGGATCATCGAGCAGGAAGGGGGCCTGGCACAGCGCCACAACCTGGCGGGGGAAGGTGAGCGGCTTCTGGCCGAGCGCGTGTGGGTTGCCGACGTTGGTGAAGATGATCTTCTTGCCCTCCTTCTGGAGCTCGGAGGCGCGCAGGTACAGCTCCCCCCGCACCGCGTACTGCACCTTCTTCACGTTCTCGTTCAGCTCCTCGTAGTCCAGCGGCTTCCTCCCGCCGCCGCCGCCGCCGCCGAACATCTTGCCGCCGCCGCCGGATCAAGAAGTTGAGAGGAGTTGGTGGCTGTTGTGGTGACAGTGTGTGCTGATGAGAGAGGAAGGGGAACCAAGAAACAGGGGAGCAGGTGAGAATTTGTAGGCTACTGGAATTGTGGAATTTATCCTATTGTCCTGTTGCGCCCCGTGCGCTGCAACTGCGGATAATGCGGGGAGGAGGAGATGGCATCCGCTCGTCGTCGCCGCGGGAGGATAAGAGGATCAATGGCCACTGGTTGGGTTATCACCTCGCCTGCGGTCCACAGCCATCGCCGACGACGACGACGAACAAAGGCATCATCGTCTTCTTTGCCTCTCCCTTTCAGTTGAACTTGTCCCTTACTCTCATCTCCGTAGAAATTCAGGCAAAAAAAATGTTACTGCTACTAGAGAAGGGGTTCACTTTCAGAATCGCAAAAATGAATTCGCCCACTTGACTGCATCGAGCCACGTTAAGCAGCAAGCAATTCTCAAGATAACAGGATATAATACTGTTTAAGATGATAAAAGTTGAGGTTCAGGCAAAAGTTCAGATAGTGATTGCCACGACACTGAAGAAGAATTCCACATGAGAAACAGTATTTGTGATTGATTTGTTGCAAAAGCACAGGCAAACATGGTCCTATCGTTTGTACTATTTGATTATGTCATCCCAAGCTTTACTGATCATGCTCCCAATACATTTCGGCAACAACATTTTAACATCATTTTCCTTTCCTACAGACATTGACTAACCTGATGAACCCTTTGCTGGTCACAACCTCCACATCAAAACGTGCTTGACATGATTCATTTTTTGCACAGTATTTACAGCCCCAATGGTTGACATGATCCATTTCGCACAATATATGTTTTGGCATTCGGAAATGTCAATGATATCTCAGTAGCCAAGATCTCCCAATGGCCATGAGACACTTAGTGCCTGCCAGGAATTTTCACCCATTGCAGTTGCACTTGCAGCTCACCACTCTCGACGTTTCTAAGTCGGAGAATAATGTCCTGGACAAATTTACCATTCCTCCAGAATAGGTGACTCTCATCAGCAAGGCAGTTCTGGTTGGATGGTCGAATTGTTTTTATGATGGAACCATTCCGAATGTTCTCCGGGTCCATGTTCAGAACTTCCATGAAGGGCTCCAGGTCTATTTCTGCATCTCCCATTGGGTCGTCTCTACTGAAAGTGTCTTTGTCAAACACCCCAAGCTTAATCGGTGCAATAGGGTTCATGATCGACAAAGTTAGCTCTTCATGCCAAATAGGATTCACAGATTTCTTCTTTACACTAGTCTTCACTTTTTGCTTGCCGAGGCGAAGGACGACATATGGATCACTGCCTCTTGTGTCGCGGTAGGCAAGGTTAATCCCACGCACCACCCGTATTTTCAAGAGGCCTACCAATCCGTCCATAATTGGATTTAATTGTTGTTTAGTTCCTGTGGATTATCAGTTGATACTATTTTACAATGAGAGGCAATGTGGGGGCGAAGATGTGCCTAATTCAATAGGAGAATTAGGCGACTTCTTGCAACCCCTGTGCCTCTCGGTAGAATGCGCCTGTGTTTTTTCCCCCTTCTGTCCTCATCGGCCTATATAGTTGCAGCCTTGCAGGAAGGAGCCTAAAAAGGATTGCTCAGGACAGGGTGAATGAGGTGTGAGCCTCAACCGTAGGAGTTGAGCTGACCATTTCTTTTGTGGCCTGTATTGAAACCAAACTAATTGCTTCCATTTTTGGACATGTGGGAGTTCCTTATGTTCTTCCTTATTCTTTTTTGCCACAGTAGTATTTTTGTTCTTGGATTTCGATTAGCTCGGATAAGAAACCTGGATAAAGGTGTGACCTCTATAAAGGATCACATTTGGACAACACGTGCAAAACCTATAAATAGATATGGAAAAAGGCATGGAAGTTTCAATTTACCATATCTTTTTTTTTCTTTCCTTTAGAAATGTACTGTAATATTTGAGAAGCAAATGTATTATAGCCAGAAGAGGGAGACCCCTTCCATTTCCATCATGATTCATGAGAGGCAGGCTACAAAGTGTTATCCCAGCAACAAAACTTAAACAAAAAGGAACAAAGAGCAGAACACATGGCTGTTTTCGGCTTTTCGCATATATAGAGTGATGCCATCCCCTCACTCATTCGCCACCACAGATCAGGCCAGGTCCATAACAGCACCAAGTTTTTATCAACAATAGTTAAAAAAATCACCATATTTTCAAACAATGTTTCTGGAACAAAGTTTATGTGAGTAGCAAAATGTAAGGTAAATAAATTAAAGCAGCAAGTGTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0363500.2 | 7 | 451906 | A | G |
| Osa07LNT0363500.2 | 7 | 447404 | C | T |
| Osa07LNT0363500.2 | 7 | 448138 | T | C |
| Osa07LNT0363500.2 | 7 | 449622 | A | C |
| Osa07LNT0363500.2 | 7 | 449675 | A | G |
| Osa07LNT0363500.2 | 7 | 449725 | T | C |
| Osa07LNT0363500.2 | 7 | 450117 | T | C |
| Osa07LNT0363500.2 | 7 | 451182 | T | C |
| Osa07LNT0363500.2 | 7 | 451758 | T | A |
| Osa07LNT0363500.2 | 7 | 451863 | T | C |
| Osa07LNT0363500.2 | 7 | 452621 | T | C |
| Osa07LNT0363500.2 | 7 | 452634 | A | T |
| Osa07LNT0363500.2 | 7 | 453042 | A | G |
| Osa07LNT0363500.2 | 7 | 448201 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0363500.2 | osa-miR5832 | Cleavage | 3.5 | 24.364 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR156a | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156b-5p | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156c-5p | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156d | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156e | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156f-5p | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156g-5p | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156h-5p | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156i | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156j-5p | Cleavage | 4.5 | 12.671 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR156k | Translation | 5.0 | 15.697 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR408-5p | Cleavage | 4.0 | 16.309 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR444a-3p.1 | Cleavage | 3.0 | 23.199 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR528-5p | Translation | 4.0 | 15.624 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR529b | Cleavage | 4.5 | 19.311 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR444b.1 | Cleavage | 3.5 | 22.645 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR444b.1 | Translation | 5.0 | 17.356 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR444c.1 | Cleavage | 3.5 | 22.645 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR444c.1 | Translation | 5.0 | 17.356 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR444d.1 | Cleavage | 3.0 | 23.199 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR1861g | Cleavage | 4.0 | 13.392 | 1 | 22 |
| Osa07LNT0363500.2 | osa-miR1862f | Translation | 5.0 | 21.861 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR1862g | Translation | 5.0 | 21.861 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR3979-3p | Cleavage | 3.0 | 17.996 | 1 | 20 |
| Osa07LNT0363500.2 | osa-miR5157a-3p | Cleavage | 4.5 | 13.413 | 1 | 24 |
| Osa07LNT0363500.2 | osa-miR5157b-3p | Cleavage | 4.5 | 13.413 | 1 | 24 |
| Osa07LNT0363500.2 | osa-miR5339 | Translation | 5.0 | 12.731 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR5488 | Translation | 5.0 | 13.187 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR5492 | Translation | 3.5 | 11.508 | 1 | 21 |
| Osa07LNT0363500.2 | osa-miR5523 | Translation | 5.0 | 20.973 | 1 | 22 |
| Osa07LNT0363500.2 | osa-miR5524 | Translation | 4.0 | 21.703 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0363500.2 | 7 | qSS-7a | Physiological trait | Sterility | RM295 | RM3831 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)