© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0033600.1
AAACGGGGCAAATAACTAGATTTTGATTTCAGAAACAGGCACAACGGGTAAATGTTTGCAAGCTCACACCGTACTAGCGTGCGCATTGTGAAAACCTGACATTGAACATGGCAAATACATTATTGGTTTCTGAAGTCCTCGGGGCCTGGCACTTGGAACGAAAATACTCGCTGAACTCCAGGACACCATGGACTCAAGGTCCAGTCTCTGAACTGATCAACCTCCTTGTGGAGCACCAAACCTGTAGCTTCATAACCGACCCACTTGATGATGATCCACGTTCCACAACAGCTGAGCTGGGCATAGGATTGCAGCCTTATCTTCTTCCAGATATCGCAACCAGAACTGCAGTTGTCCTGGCACGCAAAATGTGTATGCAAAAACAACTGGGTGGTTGTATTCTGGGAATAATCTGGCTTCACCTGTTCAGAAGTTGCTGTGGCTTGTGAACTGTGCTGAAAGACCTATAGTTTTGTAATGTTGCTTTCAGACAGTTGACAAGATGGAGAACGGCCTGCACCTTTCAACTCTTGCTGGCTGTTGAAGTCTCGAGTATTTCATCTGCTAACTGAAATTAAAGACTAATGATACTCATGACTTCAAAGACAGGTGAACAACTGCATTCTTCAAAATCTCCAACACCTGTCTTCAGCCAAAAACCCATCGAAACTGCAAATTCATGATCTAGACAAACATTCACATCTCCCACCGAATATATGATATAATCAACAAAATTCAAGAAGTTCCATACAAAAACATGTTGCCTTGACCAAGGATAAGGACTGAATCCTTGGAGATAGGCACAATGTCCTGAACCTTTTCACTTGTAAAGATTGCTTCAATAGCTGTGAGCTTAATGGTTGTTGATTCTCTTTCTCCATCACCACCTCCATTATCACTGTTGGGGGGTTCAACATCAAGTGCTGACATTATGTGTATGGAATGCCCACCATCCGAAATCCAAAAGATTTCTGTCTCTGCACAAGCACTTTGTAGAGCTACTTGGAAAGACAGCAAATAGCTGCACTTTCATGGCATTATCCAAACAGTGTGTGTGATTTCCACTATATCTCTTGCTAGTAGCTTCTGAGAGCAATTCTTTGTTTTGAAGACTGAATACATGTAACAATCCAGCTGAATCAAGGACCAAAAACTTGTCCTTGGAAAGAGGACGGATTGAAACAACTTTCACTACATTTTTCACTTCTACGGCACCTTGTGAGTTATGATGATCCTCAGAACTACATGAGGAAAAGAAAGAGAAATAGCTCCCTGAAGTCTGTTTTACTCTCAAAGTTGCCAGCTTACGAGTGGAAACAGCTTCTCGTTTGCCACCTCCCTCGCTACCGCCATGCCCAATTGGCACAATAAAACCATTCCGAATTCCATTCTTCTTGTGCAGGCTCTTCCTTACTGCTGCCCCCGCACCCTCCTTCCTCACCTGCCTCTCTTTCCCACTCTTCATCAAGCCTTGTAGCGGGAACACGCGCAAACCACCAGCCTCACCGAGGAGCAGCCTCCCCATGGCAACCTCCATGGCGTACACCGGCCGCGACGGCTCGAGCTCGACGACCGCGCACTTGTGCAGCTCCACCGTGCGCCCGTCCGCAGCCATCCCTGGGGCTAGCACCCAGATCTGCCCGGCGGAGAGGGACAGCAGAGCCACGGCGTTGACCCCGCCGGCGAGGCGGACGCCGAGGCCGAACGGGAGGCCGTGCAGGGGCAGCCCCGAGGCGGAGGCCTGGCGCTTGAAGGAGAGCGGGGCGGGCGAGAAGCGGCCGGAGGCGAGGGAGTAGGCGCGGAGGTGGGCCGCGGGGGAGGAAGGGGACGGGTGCGCGGAGAGGAAGAGGAGGTGGGAGGAGGGCAGCAGGAGCACGAAGCAGGCGGCAGCGGCGAGCGGGGAGGGGACGGCGGTGGCGGGGAGCGAGGCGGCGGGCGGCAGGGAGGGGAGGAGGCGCGCGGAGGAGTCCGGGAAGAGGAGCGCGAGCGCGCGGGTGGGGGAAGGGCGCGGCGCGAGGAGGAGCGAGGCGGGGGGCGAGGTCGCGGGCGGGAGAGGGAGGCGGTGGGCGGTGAGAGGAAGGCGAGGAGGAGACGGCGGCGGCGGCGGCGGAGGAGGAGGCGGAGGCGGCATGACCACCGCCGGTGTTTGAGGGGGAGTGGGTGGTGGCGCGGCGACCGGTCGGGGCGAAACGGGTCGAGACTTTTTTGTGTATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0033600.1 | 1 | 28676994 | T | C |
| Osa01LNT0033600.1 | 1 | 28677129 | A | G |
| Osa01LNT0033600.1 | 1 | 28677571 | T | C |
| Osa01LNT0033600.1 | 1 | 28677824 | A | C |
| Osa01LNT0033600.1 | 1 | 28677838 | G | C |
| Osa01LNT0033600.1 | 1 | 28678269 | T | C |
| Osa01LNT0033600.1 | 1 | 28679228 | A | G |
| Osa01LNT0033600.1 | 1 | 28679860 | T | G |
| Osa01LNT0033600.1 | 1 | 28675617 | T | C |
| Osa01LNT0033600.1 | 1 | 28676963 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0033600.1 | osa-miR5537 | Translation | 3.0 | 3.3 | 1 | 22 |
| Osa01LNT0033600.1 | osa-miR5835 | Cleavage | 4.0 | 20.362 | 1 | 24 |
| Osa01LNT0033600.1 | osa-miR156j-3p | Cleavage | 4.0 | 18.439 | 1 | 22 |
| Osa01LNT0033600.1 | osa-miR168b | Translation | 4.5 | 10.771 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR417 | Translation | 4.5 | 17.017 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR1435 | Cleavage | 4.5 | 9.666 | 1 | 20 |
| Osa01LNT0033600.1 | osa-miR1848 | Cleavage | 3.5 | 23.806 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR2099-3p | Cleavage | 4.5 | 20.362 | 1 | 20 |
| Osa01LNT0033600.1 | osa-miR2101-5p | Cleavage | 5.0 | 17.216 | 1 | 22 |
| Osa01LNT0033600.1 | osa-miR2103 | Translation | 4.5 | 24.599 | 1 | 22 |
| Osa01LNT0033600.1 | osa-miR2103 | Cleavage | 4.0 | 10.282 | 1 | 22 |
| Osa01LNT0033600.1 | osa-miR2864.1 | Cleavage | 4.5 | 10.046 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR2924 | Translation | 3.5 | 19.061 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR2924 | Cleavage | 5.0 | 21.943 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR2924 | Translation | 4.5 | 18.935 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR5075 | Cleavage | 2.0 | 21.423 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR5075 | Cleavage | 2.5 | 16.56 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR5075 | Cleavage | 5.0 | 22.612 | 1 | 21 |
| Osa01LNT0033600.1 | osa-miR6255 | Translation | 3.5 | 5.907 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0033600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0033600.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0033600.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0033600.1 | 1 | qCC-1 | Physiological trait | Source activity | C122 | R1012 |
| Osa01LNT0033600.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0033600.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0033600.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0033600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0033600.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0033600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)