© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0033700.1
ACGAAAGTAACGCAGCACCGAAGAAAATCAACGGCGCTAATATTGTCTATTACCTTTGATATGCTAGTCAATCAAAACATCTATAAATTATTATCTTCTGAGATGAAAGGTTTAACATCGGCTGACAGCGGACTCAAATAGTTAATGTACAATACTCAGACATTGTTAGCATTAGAACAGAAGAAATGGTTAGCCAATCAGTCGGATGCCGTCTCCGTGCAGCTCGGAAAGGAATGCCGCATTGCCGCAGCTTGCAACCATGTCATTTCCTTGGCGGAAGACATGATGATGATAAGTCATATCATCGTCCTAAACAATATTCCTTCTATTCTTTGCTTGTCACAGAAGCCTCAGTCCGCAATTGCAGGACGAAAGAGTACAACTACTGTACAACTTGCACGGGCTGCAAAATCATAGGAGCCCCTCGAGCACAAGCGCAATGAACCTTTAAGAAACCACCTCGGTATCCCTTGCTGACAACCTGTAACTTTGTTTGAAACAAGTCCAGCAAACGCAGACCCTTTTGAGTGACACCGCTGTCCTTGTCTGGGCTCTGTTTTACTCACATATCATCGTTGTTCACAAGGCAGTGTGTGTACTTGTGATCAGGAAAGCCTTCTCGCATCTGATTGGAGTTTATACATCACATTTCACATAAGAGTTGCACCAGGAAGAGAGGAGGTTGCATCTGCCGTTTGCATTGCAGCAGGCACAAATGGAATTGGTGCCTGGTGCGGTTCATTGATGAAGCCCAGAACTTTCAAAATCTGTCTGGGCAAGATGCTGTGCATGTTCCGCTGATTAACAAAGGAACAAAGAGGAGTTCGTAGATTGGGGTACTTATTCAAAGCTATTTCAAGCTGGGGTGGAGGTAACTGCAAAATAACATCAAACGAGCGTGGCTGAGTCTGATATGCCAATTTTAAGAACCCAACCCACAGCTTTGGCATTTTCCATATCTGCTTATTAACAAGCCTGGAGAGTATTTCCATGACAAAATCAACCAAAGCTGGGAAAGCATCAAGTGCTTGAATAACTGTTCTCATGAAAAGAAGTGGAATTGGTACATTGTCAACCAATTTATTCAGTGACTTCTCCAAAACTTGCTGAGTAAATACCGTGCGCTGTTCAAAGCAAGCTGTGCAAGCATCAGTGACCTTCTTCAGGGCAACTCTATCCTTTTCAGGATTAATATCATGAATGGCTATAAGAACTTCAGCAGGGGTTAAAGCCGGACCAGTATGAGCAGATCCCTGCAATATCCGAGCAAGTGCATCTTGGAATCTATCAGGTGGGAGATCAACTAGTCTTGGAAATATGGGCAGCACCTCTTCCTTTGGAAATGAGGATAACAACGGAATGAGAATAGATGCATCCTTCAGCTTGGTTTTATATAGATGTTTAACTGCCGCTACAAGTTCGGCTGAAGGAGTTGAATCTTCTGTCAGAGTTTGCAATATCAAGGTAACAAGCTCTTCACTGCCTTCAGGTGGGTTATGAATAATAGCCAGCATCTCAGAACATGAGGATCCCAGGTTTCTTACAAGATTGGGTATATGCCAATGGATACACTGCTTGACAACTTTTGGAGACCTTCCATAAACATTGAACAGATGTTGAAGAAGAATGGGCCTCTTCGTGCAAAGTGCAAAGAACAATGAAGTATGGCGTTTGGCCTCAGATACAGATACTGCAGATTGCTTAGGTGAAACCAAATCGGTCTTATTGCATGTACTTTCAGAAGGTTCAGCATCTGAAATATGGGAGCCACTAACCGAAGTTTCCTGGCTGCCTGCCTCAAACTCAGGTGAAGATTCTTTCAAGGATGTGAAATTAATGTCCGTCTCCACACCATGTTTATTAGCAATTGCCAAAAGACTGTCGATGGCAAACTGCTCAACTCTTTCTGATGCGTATGTTAGTTCATAGAGTTTTTTTGTAACCAATCTAACTGCCTTTCCCCTGACTTCATCTTGAGAGTGAATGGCACACTTAAGAGCAATATCTAAGCAATCTTGTCGAAGTGGAGGCCGTGCTAAGATAAGACTCCACACGGTTCCAAGGCCTTGGGTGACACGATCACCATCACTGTCCTTTGTTTGCTGGCTGTTGCCTTGTGACACACAAATATCCTCCAGTAATTTAAGCATAGACTCAGGCAAGTATGGTGCATCACACAGAAATTTGCTAAAAGATTTGTCTGAAGCAGGTAGCGAGTGAATCAAGGACCTTGCAAGTGATATAAAGAAGTTCTCATAATTTTTAGAAGCAGGTAAGGTGCTTTCTGGTGAATCAGCAACACTCACACTGTGCAGCTGATACAGCACATGCATTGCCAGTTCATGACCCTGATCATGATAATGGTATATAATGTGTCTCTGAATCAAATCCATAATATTGTCATCAGCAGTACTCTGGGCAATCAAATGAGCAAGGAGGGAAAATCTTGTGTTAACGCTGTTTTTCTTGTAATCATCGATTATCCGTCTAATTGCTAATTTGTGCAACAAGATTTTCTCATCGTCACTTAATTCCAGATGAGATGGAAGAACTGGCAAATCATGATTAGTAGTATCCTCCAGCGTTGATGCCTTCAAAACTGGGGAAAATGGATCAACCTCCAATTCCACGCTATCCAATTCATTGTTTGAAGTAGCTTCTGGAGACAATGGATTGACCATCTCTTTATCAACACCAGAAGAATGAAATCCAACATCTGCTAATGCCTGCACTTCAAATTTCGGCTCCAGTTCCAAGGCATCATCCAAAATCTCACTATTTTCCTTTGGGAGTGATTGATTGGGTTGACAAGATGTTTGCTGCACGTCTTCATTTTTAGATAGGTCTCCTGAATAGTCTAAAGAGTTTTCAACCTTCCCTGAAACAGGATAAGGTACATTTGACAAGTTATTTGTCTGATGCACGCCGGTGGTTTCCCCCTTCACATGTATGGAACTAGTGGCTGCAGGGGCAACTGTCCGACGAGGATCAAGGCGACGAGGATCTCTTCTTGGGTCACGCTTAGAATCATGAACGCCAGACACAACAGGCACATCTGACATTGACATGCTGACTCCATCTGCAGGAAGTGCAAACTGCGTACTGTAGGGCATTGAGTGGGAGTTTGCTGGCAAGTTTTCTGTCAGGGGACTGGAGGAAGATTGAATTTTCTTTTGCTGGCCATTGTTGCTGGTAGCTAATAGAATTGAAGTTTCAGGTAGATGTTTCATTGTTTCTATTACAATGTCAGCCATGACATCTGCTTCTACTGTTGAGATGAGAATGCCAAGGGATTCAGCTCCTCTTTCCCCTTCAGCAAGTAAAGCACCAATCATTTCAATCATCTTCTCAACAGGAGACATATCACAATTCAAGAGAGCTGGATCAGAGGAATGATCCACATTCGCTTCATTGTCAACCTGCATATTAGAATAATCAGATGCTCCCTGAAATGGTGGGTTTAAAGCAGCAGAGGTATCAAATCTTGCTCTTTTAGCTACGCCATCAGCTGTAGCAAAAGCATCACTTGATCTGGCAGCAGGATATTTCCGACTAACATCTCCGTAAGGCATATCCAACGTTGAAGGTTCATCCTTGCTAGCACGAGAAGCGCGCTCAATATTTCTAGTCATCTTCTCTACTTGCCTAATAATCTGTTCTGTTGCTTCACCAGGGCTCAGAACACGAAGCTGCCTTACCAGAGTATCCTTGGACTCAATCATTGCCTGGCAAGGACTCCTTAGAAACCCTAAAAAAGCTGTTTTCAGGGAATACCGCAGACTTGCAGGATGAGCTCCTTTTGCAACCTCCAAACTAGGGTCAAAACCAAGTAGCACTGGCAGTATGCGTTCGTAGTAAACAGGTCTATTCTTTGCAATAGCTGCAAGAGAATTAATGGTGCCAACTAGGAAGGATCCTTGATGAGCACAAGCTGACTGCAGTATATCCACAAGGAGGATGAGAGCCCTGTTTGCATCAGCTTCGAGAACAGCAGGGTTAAGGCTGGGATGGAATTGAGATAATCTTGAACTATCAAACAACCTCCTGTTCCTTCCTTCAGTTGGCTGCATCCGGTCACTTTTGGATTGAGGTGCGAAACACAGGATCCATGTTTCAATGAACTTTACAGCAAACAGTTTAGTAGCAACTGGGACAGACTCATGGATCAGATTATGGACTGCATCTTTAAACTGCTTCGTCCAAGCCCACATCTCTTCAAGCCAAGCATCAACCCTTCCACACTTATTAATCTGAAGTGTCATCTCTTCCAATACAGCAGCAAATAAATTTGTCCCACTAGCTATGGATTGATTAACAACCACAGGATCATCATGTTTCAGAAATGATAGCAAATTTGGCATCAGCACAACCAAATCTTCTGTTACATTTGAGCCAAGCTCTCTCAGCAATCTTAGGGCACGAGACGAATCGAAGCGAGGGGAAGGCGCATCGCCACGCTCCAGCGGCGGCGCCCCGGCAGCGTCGCCTCGCGGCTCCGGCCACCGGGCGCCGTCCGCCTCGAACTCCATGGCCCCGGGGGGTGTGAGCCCCCCCCCCCCCCCAAAACCCTAGCTCTGGGCTGCAGCCCCCTCCCGGGGAAGGCGGCCGCCGCGGAGAGCTAGGGCCCCCCGTATCTGTGGCTGGCTGGGAGGTGGAAGCAGCGGTTGCGGCGATGGGGGGCTGGTCTAGGGTTTTGATTTGGGAGGGAAGGCCGCCGCGGAGGAGGCAGGCGGCCGGTGGAACCGGGCGGGGCGGGGCGAGGCGCGGGCGACGTGGGGACGGGGGAAGAGAGAGAGAGAGAGAGAGAGAGACGGGACGGGAGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0033700.1 | 1 | 28693497 | A | C |
| Osa01LNT0033700.1 | 1 | 28691225 | T | C |
| Osa01LNT0033700.1 | 1 | 28691272 | C | G |
| Osa01LNT0033700.1 | 1 | 28684080 | C | T |
| Osa01LNT0033700.1 | 1 | 28684095 | T | G |
| Osa01LNT0033700.1 | 1 | 28684788 | A | G |
| Osa01LNT0033700.1 | 1 | 28685524 | C | G |
| Osa01LNT0033700.1 | 1 | 28685693 | T | C |
| Osa01LNT0033700.1 | 1 | 28686886 | C | A |
| Osa01LNT0033700.1 | 1 | 28688120 | A | G |
| Osa01LNT0033700.1 | 1 | 28688349 | C | T |
| Osa01LNT0033700.1 | 1 | 28688610 | T | G |
| Osa01LNT0033700.1 | 1 | 28689072 | T | A |
| Osa01LNT0033700.1 | 1 | 28690055 | T | C |
| Osa01LNT0033700.1 | 1 | 28690659 | T | G |
| Osa01LNT0033700.1 | 1 | 28691304 | A | C |
| Osa01LNT0033700.1 | 1 | 28691544 | A | T |
| Osa01LNT0033700.1 | 1 | 28693270 | T | C |
| Osa01LNT0033700.1 | 1 | 28693394 | G | C |
| Osa01LNT0033700.1 | 1 | 28693820 | A | G |
| Osa01LNT0033700.1 | 1 | 28694586 | A | G |
| Osa01LNT0033700.1 | 1 | 28694928 | A | G |
| Osa01LNT0033700.1 | 1 | 28695380 | T | A |
| Osa01LNT0033700.1 | 1 | 28696504 | T | C |
| Osa01LNT0033700.1 | 1 | 28697059 | G | T |
| Osa01LNT0033700.1 | 1 | 28698081 | C | G |
| Osa01LNT0033700.1 | 1 | 28698251 | A | C |
| Osa01LNT0033700.1 | 1 | 28698404 | G | C |
| Osa01LNT0033700.1 | 1 | 28693350 | A | G |
| Osa01LNT0033700.1 | 1 | 28697985 | G | A |
| Osa01LNT0033700.1 | 1 | 28688018 | A | C |
| Osa01LNT0033700.1 | 1 | 28695511 | G | A |
| Osa01LNT0033700.1 | 1 | 28697669 | G | C |
| Osa01LNT0033700.1 | 1 | 28687473 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0033700.1 | osa-miR5806 | Cleavage | 5.0 | 12.131 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR1440b | Cleavage | 5.0 | 20.313 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR396a-5p | Cleavage | 4.5 | 18.953 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR396b-5p | Cleavage | 4.5 | 18.953 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR396c-5p | Cleavage | 4.5 | 18.953 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR390-5p | Translation | 5.0 | 20.208 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR815a | Cleavage | 4.0 | 12.632 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR815b | Cleavage | 4.0 | 12.632 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR815c | Cleavage | 4.0 | 12.632 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR1435 | Cleavage | 5.0 | 19.894 | 1 | 20 |
| Osa01LNT0033700.1 | osa-miR1861g | Cleavage | 4.0 | 13.522 | 1 | 22 |
| Osa01LNT0033700.1 | osa-miR1861g | Translation | 5.0 | 14.958 | 1 | 22 |
| Osa01LNT0033700.1 | osa-miR1865-5p | Translation | 4.0 | 17.397 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1865-5p | Cleavage | 4.5 | 19.665 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1882a | Translation | 4.5 | 17.448 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1882b | Translation | 4.5 | 17.448 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1882c | Translation | 4.5 | 17.448 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1882d | Translation | 4.5 | 17.448 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1882e-5p | Translation | 4.5 | 17.448 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1882f | Translation | 4.5 | 17.448 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1882g | Translation | 4.5 | 17.448 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1882h | Translation | 4.5 | 17.448 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1883a | Cleavage | 5.0 | 7.659 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR1883b | Cleavage | 5.0 | 7.659 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR2880 | Translation | 4.5 | 23.654 | 1 | 24 |
| Osa01LNT0033700.1 | osa-miR2918 | Cleavage | 4.5 | 18.004 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR1862f | Cleavage | 5.0 | 18.671 | 1 | 20 |
| Osa01LNT0033700.1 | osa-miR1862g | Cleavage | 5.0 | 18.671 | 1 | 20 |
| Osa01LNT0033700.1 | osa-miR5144-5p | Translation | 4.0 | 14.627 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR5144-5p | Cleavage | 5.0 | 15.775 | 1 | 21 |
| Osa01LNT0033700.1 | osa-miR2275d | Cleavage | 3.5 | 17.573 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0033700.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0033700.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0033700.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0033700.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0033700.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0033700.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0033700.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0033700.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0033700.1 | 1 | qCC-1 | Physiological trait | Source activity | C122 | R1012 |
| Osa01LNT0033700.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)