© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0002000.1
GCAAGCGCTTCAAAGCGCCGCCGCGTCGTCTCCACGCCTCGGGCCTAGGGCACGCGCCGACTCGCCGCCGGGGAGACCGGGCGGCCGGCGAATCCCCCACCCCAAAACGGAGGCGAAATTTAGCACGGGCTGTGCGCGGTCGAGCGTCCCCGGACTCATCGGCGTGGAGAGACGAGGACGCCGCGCGCGGCGCGGCAGGTTAGATTTGGATCCGCGCCTGCCGGGGGATCAGACGAGAATCGGTTGCATCTGCCACTGCATTCTTGCAGCCAGGGTGCATCCCGTCGGGGCAATTGCAGGCGAACTCCAGGTCGTCGCTGTACGTGCAATTCCCGCCGCTTACTTGACATTTGGGACAATCCCCTGAAACCACCGCCCACTCTAGTAGAAACCCACTCCTCATGCTGGCAATATAGCCGGCCATACTCCCATTGTGACGCTGAACGATCGGCACAACCGTGAAGTTACAGCCCGGTGGAATCCCATCCTCGTGTAAATGGTGGTCGCTGACGAGCCGGACGGAGGAGTTTTGGTCATCACAAGGCAGGCTATGGAAGCCGGGAGGAGCAGCCGCCGCCGGAAGTGACTTGTTACACGAGAGGAAGCGCAGCTCTGCGTTGGCTTCGCTGATGACGAACGGCGCCTGCCAGATGCCATCGGAGATGTTGAACGGCGGCGCCGGGCAGCCGGTGGCGAGCGGGAGATTCTCGTCCACCACATGGACGGTGTGGTTTCCGGTGAAGATATCAACAACGCGATACGCCTCGTAGATGGTGTGCGTGAGGTATGCGCCGGTGGCGTTGCACTTGAGCTGGAAGGGCGGCGACCCGCACGGCGGCCGGCCGGGCTCCTCCAGCCAGAACGGGTAGGAGATGGTCAGCTTGCCGCATGGCGTGGGCAAGCAGCCAGGACTAGACGAGCTCGCCGGTGCCGGCAACTCGAGGAAGGAAGCTACCAGCAGTAGCAGTATGAGCGGAGGCATATCTGGTGGACTTGGGTACGCAAATCAACTACGGAATGCAGTGGTGAAATGGATTATATGAGAGAGAAGAAGGGGACGAGAGATCGAGGGATGGGATATGAGGCGTGGGGCAAAAGGACGGTGGCGAAGCGGTTTTGACCGGTCAAAGTCTACGGATTGAACATACTGCTACATTGCTACTACTCTCTCTGCTGCTACAGCTTCTTGACGAAGTACTCCGTACTATTTTCTCCGTTTCATCACTATAGTATTTTTCACGTTTATATTGATGTTAATAAATCTAGATAGGTATATATGTCTAGATTAATTAACATCAATATTAACGTAAGAAACGCTAAAATGATTTACATCGTGAAACGAAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0002000.1 | 1 | 1957530 | T | G |
| Osa01LNT0002000.1 | 1 | 1959554 | T | G |
| Osa01LNT0002000.1 | 1 | 1958695 | T | C |
| Osa01LNT0002000.1 | 1 | 1959648 | T | G |
| Osa01LNT0002000.1 | 1 | 1960533 | T | C |
| Osa01LNT0002000.1 | 1 | 1961293 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0002000.1 | osa-miR396c-3p | Cleavage | 3.5 | 15.775 | 1 | 21 |
| Osa01LNT0002000.1 | osa-miR396c-3p | Cleavage | 4.5 | 16.301 | 1 | 21 |
| Osa01LNT0002000.1 | osa-miR399d | Translation | 5.0 | 24.365 | 1 | 21 |
| Osa01LNT0002000.1 | osa-miR399i | Translation | 4.5 | 24.365 | 1 | 21 |
| Osa01LNT0002000.1 | osa-miR399j | Translation | 5.0 | 24.365 | 1 | 21 |
| Osa01LNT0002000.1 | osa-miR530-3p | Translation | 3.0 | 22.456 | 1 | 21 |
| Osa01LNT0002000.1 | osa-miR2118c | Cleavage | 5.0 | 14.534 | 1 | 22 |
| Osa01LNT0002000.1 | osa-miR2118q | Cleavage | 5.0 | 14.534 | 1 | 22 |
| Osa01LNT0002000.1 | osa-miR1437b-5p | Translation | 5.0 | 10.534 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0002000.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Osa01LNT0002000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0002000.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0002000.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)