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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs
Summary
Sequence
Coding Potentia
Genome Browser
Expression
Variation
Sequence

>Osa07LNT0364200.1

ATATAATCAGTTGTACCTTATAGAGGTACTTTTGTGCAACAATGTCAGTTCGAGTATAATGAGTTCAGAAACACGAGTTACTACTTTCAGTTAACACAAGGGATGCTATTTCTGTAGTTTGGAACCATACAAAAATACTTAGGAATAAAAGCGTATATAAGACCAGAGAAAATACTACCTTTTCTAGCTGATGCATATCTTTGTATCAATGTGCAATGTTCCAAAAGGTTACTAAAAGAAGTTGTGAAATGTTCATATAA

Coding Potentia
Explanation CPC Score
noncoding -1.32329
Genome Browser
Expression
Variation
Transcript ID Chromosome Locus Ref Alt
Osa07LNT0364200.1 7 1215399 A G
Transposon
Transcript ID Transposon ID Chromosome Strand Start End Counts
small RNA targets
Transcript ID MiRNA ID Inhibition Expectation Score Binding Start Binding End
Osa07LNT0364200.1 osa-miR1852 Cleavage 5.0 13.659 1 21
QTL
Transcript ID Chr QTL Gene Character Major Character Minor Marker Interval1 Marker Interval2
pre-miRNA
Transcript ID Pre-miRNA Identity(%) Alignment Length Pre-miRNA start Pre-miRNA end E-value Bitscore
GWAS
Transcript ID Chromosome Locus Trait Value Plus Minus