© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0002100.1
GCAAAATTGCAACCTCTAGTTAGGGTAACAATGGGATGTGTTCTCCCTGATACCACTCGCTAACCTGAAATCATGAACACACTGAACACTAGATTACACGAGATTGTTTGAACCCTGTATTTCTCCTACCGCATTCACCAATTGTCTGAATTTCTGCCAAGCTCATAGTCAAACACTTGTAGTATTAATTAGTCCATCAACCAAGAGGGGACAACTTAGTTATCCTTATTTCATCAGAATCAATACAAAGTTTCTCATCATCCGCTAGAGTTTGATGCTACCGAGTGGTTAGTAGATTGGCTATGAAATCTATGGATTACTGAGTCAGGCGAATACTGTAGGCTGTCCTTCAGCAGATGCGAATCTTCCTTTGGAGACGCATTCTTGTTCATCTTTTCCGCTGGACATTCCCCGTTCTTGATACAATTCAGGACCTCCACTACCTCCTTAATTGGTGGCCTGCTCTCTCTGTCCATCTGCAAGCACTGAAAGGCCAGCTCGGCCACCAGATCTACCATCCTCTTTGTTTCACTGTCAGTCTCATAGCCGATCTCTGGATCAACCAACTGATCAACTTCATGGTTCTGAATTCTGTTGAGAGCCATGTTAGCCAAGTTAATGTCACTGTGGCTCCTGGACATGTCCACAGCTGGTTTTGAGGAAATTAGCTCTATCAACACAACACCAAAGCTATACACATCACTCTTATCGGTTAGCTTGTAGCACTGGTGGTACACTGGGTCAACATACCCTGGTGTGCCCTGTGGAACAGTTGATACATGGGTGACTTCAAGCGGGAACAGGCGCGATAGTCCAAAGTCCGCAACTTTGACATGGAAGTTGTTGTCCAGCAATATGTTGTTGGTCTTGACATCACGGTGTATGATTTCAACTGCATGAAGGTATGCCAGTGCCTCAGCCGTTTCTATCGCAATTGTCATTCTTACAGGCCATGTGAGGCCTCGTTCTCCTGCACGGGGTCCATGTAGATGGTCTGCAACTGTCCCATTTGGGATGTACTCATAGACCAAGAGAAGGTCACGGCTAGAACGAGACGTGCAGCCATATAGGATAACAAGGTTCTGGTGCAGTAGGCGGGACAAAATGTCTACCTCATTTAGGAATTGCTCTACTCGTCTGTAGTTGTTCTTGTAAAGGCGCTTCACTGCAACTACTCTCCCATCCCGGAGCTTTCCTTTGTAAACAGTTCCAAAACCACCATCACCAAGTTCCCTCGAGGCACTAAATCCAGCAGTAGCCTCTTCAAGTTCCTCGTAAGTGAATATATGGGGAGAACCACCCAACTCAAGGTCTTTGCTGTATGATTGCATTGAAGATGAACTATGCATGAGATCTTTCAAATCTCGGGTTTGTTTCCTCTTCTTGCGTTTGTGCCAAGCAAAAATGAATATAGATACAATCAATAATATTCCGCCGCTTGATCCACATGCTATTCCTATTATGTGACTCTTGCTTCTTGAACCAGATGACGGCGTCTCTTGCCATGTCAAGAGGAAGCCGTCGCGGATGAGCTGCTCATAGCTCCTCGCGTCCGTGCCCAGCACCGGCACGACGGTAGCATTGCAGCCTTCCATGTAAAACGCCGGGTAGTCGCCCGAATCACTGTAATTCCCTCCTACGCGAGCAAACGTCTTGTTGCCGCACCTCGTCTCCACGAGGTCGTCGTCTCCGTCCCGCGGCACAAGCGCCTTATTGCAACTGTACAGGAAGAGGTTGAGATTGGTGGTGCTGATGGAGAACGGGAGGCCGACCTTGGAGGAGGTGTTGGTCCTCGGAACATGGCAGGAGTATTCTTTGCTGACGCCGGAGAAGACAATGAAGTCACCGAGCTTGTGGATGTCAGAGACGAGCAATGAATTGTTGCCGTAGAAGATGTCGAGGATCTGGATCCGATATCTGGGCTTGTAGTAGCCGAGGTATGGAGTGTCGTTGTGGCAGATAACCTGGAATCCAAGCCAGCCGCATTTGCTCTCCGTTGCCTGCTCCGGCACGACGGCGAACGGCGACGAGATGGTCACCTTGCCACATACAGTACTGGCCGCGCAGCCTTCTTGTGGACGATTGTCTGCCGCCGTATTCGCTGCTTGACTCGCCCAGGCGAGGCAGGCGAACAAGAGGAACAAGGAAGGAGAGGGCATCGAAAACGAAGAGGATGAATTGGTGATGTGTTGTTGATGAGGATTGAGGAAGACATGAGAGAATTAATACTGCTACTTCTTCTTCTAGTACGATACATTTAACTTTGGGAATTCTCTGTAGTGGCCGAAAAAATTGACTGGATAATGGCTGTCTACGGCCTCATCGTCTTGCCGTATCGGTTCCAATTCCAACAGATGTGCATGGTCTTCTCAGTCATGTACCAGAACAGGATCGAAGATTGGAAGGAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0002100.1 | 1 | 1959554 | T | G |
| Osa01LNT0002100.1 | 1 | 1959648 | T | G |
| Osa01LNT0002100.1 | 1 | 1961293 | C | G |
| Osa01LNT0002100.1 | 1 | 1961594 | C | T |
| Osa01LNT0002100.1 | 1 | 1961910 | A | C |
| Osa01LNT0002100.1 | 1 | 1961958 | C | T |
| Osa01LNT0002100.1 | 1 | 1962012 | G | C |
| Osa01LNT0002100.1 | 1 | 1962148 | C | T |
| Osa01LNT0002100.1 | 1 | 1962290 | G | A |
| Osa01LNT0002100.1 | 1 | 1962637 | G | C |
| Osa01LNT0002100.1 | 1 | 1958695 | T | C |
| Osa01LNT0002100.1 | 1 | 1960533 | T | C |
| Osa01LNT0002100.1 | 1 | 1961686 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0002100.1 | osa-miR5538 | Cleavage | 5.0 | 23.797 | 1 | 22 |
| Osa01LNT0002100.1 | osa-miR166a-5p | Translation | 5.0 | 13.479 | 1 | 21 |
| Osa01LNT0002100.1 | osa-miR166e-5p | Translation | 5.0 | 13.479 | 1 | 21 |
| Osa01LNT0002100.1 | osa-miR171i-5p | Cleavage | 4.0 | 16.944 | 1 | 21 |
| Osa01LNT0002100.1 | osa-miR816 | Cleavage | 5.0 | 19.926 | 1 | 20 |
| Osa01LNT0002100.1 | osa-miR1863c | Translation | 5.0 | 16.081 | 1 | 24 |
| Osa01LNT0002100.1 | osa-miR5160 | Cleavage | 4.5 | 19.106 | 1 | 22 |
| Osa01LNT0002100.1 | osa-miR5509 | Translation | 4.5 | 23.42 | 1 | 21 |
| Osa01LNT0002100.1 | osa-miR5509 | Translation | 5.0 | 17.433 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0002100.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0002100.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0002100.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0002100.1 | 1 | gp1a | Morphological trait | Panicle/flower | RM1 | R753 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)