© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0033800.1
ACCAAAGAACACCCTCTAGTTTAGCATCAACTTCTCAAATCACAAGTAGCTAGAATTTATGGCTAAATAAGTTATACACCATCAAAATATACATCATTTTACTCGGAATTAGAGCGGAGTTGTACAAGTGAAGCATATGCACCATCCTTGATCCGCAATAGTGCTTCATGCTTTCCTTTTTCTGCAATTTTTCCTTCCTTGAGGACTGCAATCATATCAGCCCCTTTGATTGTGGAGAGGCGGTGTGCCACTACAATGGTAGTCCTGTTGACCATGACTCGATCCAATGCATCTTGAACAACACGTTCTGATTCTGCATCTAGAGCACTGGTTGCCTCATCAAGTAGCAGTATCTTAGGGTCCTTTAGGATGGCCCTTGCAATTGCTACCCTCTGTTTTTGCCCACCAGATAGTTGCACCCCTTTCTCACCTACCACTGTGTCGTATCCTTGTGGCAGGCTTGATACGAACTCATGGGCGTTTGCTGCCTTGGCCACAGCAGTGATCTCTTCCTCTGTTACCTCACTGTGTTTCCCGTATGTTATGTTGGCACGGATTGTGTCGTTGAAAAGCACTGGCTCCTGGCCTACAAGCCCCATCTGATCCCTCAACCAGCTGACTTTTAAGCTTCTAATTTCAACTCCATCTAGTGAGATATTACCAGAATCAGGATCATAGAAACGCTCTAATAAAGCAATTATCGTGGACTTCCCACTACCGCTTTCTCCAACAAGTGCTATGGTCTTTTGGGAAGGAATGTGCAAGGTAAAGTCACTGAATATTTGAACATCAGGGCGTGATGGGTACTTGAAACTGACATTATTGAAATCAATGCTGCCAGTGACGTTTTCCATTATCGCTCCCTCGTCGCTACTTGAATCAATCCTAGACTTCCGATCGATAATACTAAAAATGGAAATGGCAGAATCCCTTGCCTTTGTTGCATTAGTAGACAATGCACTTGACTGCGAAACACCAACGGCTGCCAAAACTAAAGCAAAGAAAACTTTGAAAACATCTGAAAAAGTAGTTTTTCCCTGACTTACGAACTTTGCACCAACATAGAAGCAAAGACCGTAAGTCAGATATAACATCAAGTTTGAGAAACTTAAGCCAATCCCTCCAACGATTCCGCTTCGAATTCCCTGTTTTCTTAAAGCTTCACATTTCTTGTTGTATATTGCCACCACTCTTTTCTCTGAACAGAAAGATGCTACAGTTCTGATGCTGCCTACAGCGTCAGCCGCAACTTGGTTTGCATCCTCATACATCTCCTTAGATTCTTCACTGAACCCCTTCAAGAACTTAACTTGAGCATAGCCCTGTGCACCCACTAAAGGAATTACACAAGTGATGATCAGTGCAAGCCTCCAATCTGCCGCAAAAGCTATGGCAAAGCCAGTGATTAGTGTAGCTACAGCCTGGACTATAAGGGCCAGGTTATCTCCTACTAAACGGCGGACATTCAACGCATCGACTGAGAGCCTTGTACCAAGTGCCCCACTGGAATTGGAGGGCTTATCAAACCAAGCAACCTCTTGGTGCATAATTCTTTGAAATGACAGTGTACGGACACGCTGTATAAGCTTTCCCCCAGCAATTCCAAACAAAAAATATTCTGCTGGGATTGAAATCAAACAAGCAACCCCCAGAACAACAGACATCAATGCCCAAAATCTAGAATCTTTTCGCAGCTGATCTGGCGGTTCATAGAATGATTTTAGAACACCTGGCATTATTATACCGTATAGTGGCAAAATGACTCCATGCACTGATGCTGCTATAGAACCTAACAAAAGAACTGGCACTTCTGGCTTATTAAGATTAAAAAGCCGTCCAAATGGTGTTTTTTTAATGGCCTTACTGTCAGAGTGGTCAACCTTTTGTTGTTCGCTTGTCATTCCATCCTCATGTATATCAACAGGCAATCCTAAGGGGCTCTTGAAGGAATACCTGTTGCTCTTGCTGAGAAAATCTTTAGTTCTTGATCGTCTGAATGACAAACTAGTACTTTTTGATCTGGAATCTGGTAGTTTATGCCTTTCATCACGATGAGTCTCTTGTAGCCTAATTAGCTGGGAGTAAGCTCCATCGGGATCCTTCACCAGTGCATCATGAGGACCTTGTTCAACTATTTTTCCTTTGCGGACGACTGTGATGCAATCAACATTCCTCACAGTGCTCAAACGATGAGCGACAACGAGTGTGGTTCTTTCTACCATCATTCTATTTAGTGCCTCCTGAACTATCCTCTCAGACTCCACATCAAGTGCACTTGTTGCTTCATCGAGCAAAAGGATTTTTGGATCTTTGAGGATGGCTCTTGCAATTGCAATTCTCTGTTTTTGTCCTCCAGAGAGCTGAGTACCGCGCTGGCCAACTAAAGTATCATAACCATTTGGTAACTTGTCAATGAAGTTAGCTGCATTTGCAAGCTCCGCTGCTCTCTTGATCTCTTCAAGCGTTGCATCTTTTTTACCATATATTATGTTATCTTTAATGGAGGCCATAAAAAGCAGAGGCTCTTGGCTAACAAGACCGATCTTCCCTCTTATCCAATCAAGTCTCAGTTTCTTGATGCTAATTCCATCTATTAAAACTTCGCCAGACTGTGGATCGTAGAATCTTTCGACTAGGCTGATAACAGTTGACTTTCCGCTTCCACTCTCTCCGACTATAGCCATTGTTGTTCCACTCGCTACTTGTAACGACAATCCATCCAATATCAACTGCTCTGGTCTTGCAGGGTAACGAAAGTACACATCCTTTAGCTCAATATCGCCATTCATATCTTCTAAAACCATGCCATTGTTATCATCGGAATCTATCTCTGGTTTCCTCTCAATTGTTTTGAACAAATTGTATGCTGCAGATTGACCTTCCACAACTGCAGCAACTGCAGGTGTTGCATTGCCTAATGAGGATGCACCGGTCAACACGGCAAACAAGATAGTCATGATTTTTCCTCCTGTGTAACCTTTCTCAATGATTAGCTTTCCACCATACCAGAAGGCTAATCCATAGCTGCCAAATACGACGCACATGACAGAGCCCATGCCAAAACCAGTGATAATGCCTTCCTCAATAGTAGCCTTGTATGACTTCTTTATAAAATTACGGTACATTGCTATCGCTTTCTTCTCACCATTGAAGGACACAACTGTTCTTATAGATCCAATGGTCTGTTCAACTGTGTCCCCAGCATCACTATATGATGTTTGTCTCTTGCTAGAAACTCTAGTTAGGGCCTGTGCAGAAACTGCACTGGCAATAGCAATTAACGGTAGCGATGTTAGCATGACAAGAGTGAGAAGCCATCCTCTAGTGAATGCTATGATAAAGCCACCGATGAAGCTTGATAACAGTTCTACAAGCTTCCCTCCCTTCTCACCAAGAGCACCTTGAATTAGGAGGGTATCACTAGACATTCTAGAAACTGCTTCACCAGTTGTCATCTCTGTGTCGAAGAATGTAATATCCTGCCTCAGAACGGCTTTCAGGTATAAAGAACGGATGCGGGCAGACTGCCTTTCTCCTGCCATAGTCCAGCATGATACCTGAAGAAAGGAAGCTACTGAAGTTCCAATTCCCAGATATATGAAGTTGAGGACAACCTTGGTCACGCTGCGGAGGACGCTGCCGCTGGTGTTCGCGCCGAAGGAGTTGATGACGTTGCCGAAGAGGACCGTCATGAGGGGCTGCGAGATGCCGTTGCCGAGCGCGCCCACCGTGCCGACAACCATCAGCAGCACGTCGAGGCGGTCGGCGTACCGGAACAAGCTGAACAGCGGCACCTTCTTCCCCGACGACGACGACGCCGCCGCCGCAGCATCCTTCGTCTCCCGGCCATGATCATCACCTGTTCCTCTGCCTGACTCGTCCATTTTTCTCGCCGGCCGGCTAGCTACAGCCTATTTGCTCGAGCTGGGTGACATCACTGGGTGGAGGAGGTACCTGCATATATAGGCATTTCCTGTGCAGGATTTTGACTGTTACGCGCACTCCTGTTTTTTCGGTGCTTGGAAAATGGAACTGACGGGGAAGGCGGGATGTACTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0033800.1 | 1 | 28788419 | G | A |
| Osa01LNT0033800.1 | 1 | 28788549 | T | G |
| Osa01LNT0033800.1 | 1 | 28790241 | A | G |
| Osa01LNT0033800.1 | 1 | 28790949 | C | T |
| Osa01LNT0033800.1 | 1 | 28791473 | C | T |
| Osa01LNT0033800.1 | 1 | 28793327 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0033800.1 | osa-miR5527 | Cleavage | 4.5 | 19.598 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR5793 | Translation | 5.0 | 18.616 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR5798 | Translation | 4.5 | 13.585 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR812t | Cleavage | 5.0 | 12.821 | 1 | 24 |
| Osa01LNT0033800.1 | osa-miR812u | Cleavage | 5.0 | 12.821 | 1 | 24 |
| Osa01LNT0033800.1 | osa-miR5821 | Cleavage | 4.0 | 16.889 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR6253 | Cleavage | 4.5 | 17.14 | 1 | 22 |
| Osa01LNT0033800.1 | osa-miR6255 | Cleavage | 4.5 | 16.407 | 1 | 22 |
| Osa01LNT0033800.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 15.89 | 1 | 22 |
| Osa01LNT0033800.1 | osa-miR528-5p | Translation | 4.0 | 10.37 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR1847.1 | Cleavage | 5.0 | 20.469 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR1860-5p | Translation | 4.5 | 13.865 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR1877 | Translation | 5.0 | 15.403 | 1 | 24 |
| Osa01LNT0033800.1 | osa-miR2094-3p | Cleavage | 5.0 | 20.971 | 1 | 22 |
| Osa01LNT0033800.1 | osa-miR2099-3p | Cleavage | 5.0 | 20.868 | 1 | 20 |
| Osa01LNT0033800.1 | osa-miR2879 | Translation | 4.0 | 19.967 | 1 | 24 |
| Osa01LNT0033800.1 | osa-miR812n-3p | Cleavage | 5.0 | 12.821 | 1 | 24 |
| Osa01LNT0033800.1 | osa-miR5071 | Cleavage | 4.0 | 15.993 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR5498 | Cleavage | 4.5 | 14.769 | 1 | 21 |
| Osa01LNT0033800.1 | osa-miR5504 | Translation | 4.5 | 15.782 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0033800.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0033800.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0033800.1 | 1 | qCC-1 | Physiological trait | Source activity | C122 | R1012 |
| Osa01LNT0033800.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0033800.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0033800.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0033800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0033800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0033800.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0033800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)