© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0367200.1
GCTCAAACAAAATCCCTCTTTATACGCTCAATATACATTATGCAACGCCTGCTTATGTTCACCACTATTAAATTAAGTAAATACTATTTTCTTTGCTCATGTTCACCACTATTAATATACATTATGCTCATGTTCACTATTGAGTACCTCCTTTTTTTTTTTGGTGAGAAAAAAAAACTGGCAGTGTTATCTCCATTGCTAAAGGACTAAAAAAAACTTTGCTAAAGGACTAAAAAAAGAAGACATATGCCGTCTGGTAAGATTGCCAACTTGGCTGTTTATTTCGAGCAGATACTCTCCAAATACTTCTCCACGTTGTCTAAGCCGCATAGCTCCTTCACCGTGGGCATGATGGCAGGAACTTCAAGATCAAAGAAGGGAGGTGAAGATCCAGACCTGGAACAGTGATACTCCTCCCTTGCTGCTCTAATTGCTTCCCTTGTTGCACAATGCACCGAGGCAGCAAGTAGCAAAGGTGGCTCCCCAGAAGCTTTTGAAGAGAGCACACGTTTCTTGTGGAATCCACTGTTGAGTAGCTTAACGTTGAACTGTTTTGGGATGGTGTCCACCGTAGGAATCTTGTATGTCCAAGTCCCGTCTGAGACAAGCAGCCCATCTGAGTTCGTCACGTACTCCTCGTTCATGAAATAACCAATTCCCTGGACAAAAGCCCCTTCAACCTGCCCCAAGTCAACAGCAGGATTTAAACTCCGTCCACAATCATATATAAGATCACTACGCAAAATTGTGGTCGCTCCTGTCAGAAGATCAATCTCTACCTCACTAGCAGCTGCCCCATAGTTTAGATAGGAACCAGAAGCCCCGGGAACGTAGAGTTCTTTAGCTGATAAGTCCACACCTACCATTTTTGCCTGTGAAATAAGCTCATCCCATGAAACTGTTCCTTGTTTTTCTTGCAATTGCTCCTTGAGTGGTTTCAGCCTGTCGACCAAGATATTGCAGGCACGATGAACTGCCTCGCAGCTAGATTCTGATGTTGTACTCCCTGTGGTCCACCCTCCCTGTATCACACTTAGTGTATCTGCTTGAATAATTCTCACTCTCTCCAACAGTTCTTGCCTTCTATCAGTCCAAAGCTGTCCAAGACCGAACGCTGCCATCTGCTTCACTTTTGTCCAAAGCCCTTGGCCAAGTTCAATGCCTCCAACTTCAACAGCAACGGATCCATCATTAAGAATAGACACTTTACCAGGCGTTGGCCGAGATGCGAATTTATGCACTATCGGCACGACAGAAAGCCCCCGCTTTTTCCATCTGTTGCTTTTGTTGAAGGACCGAATCATTTCAAGTTGGTGCTGGTAATTTGCTGATGTAATCAACTGATTGCAGATAGAGGGAAGTGTATACCCCAAGGCATCTTCCATGCATTCACTATGATACAAACTGAGGCTCTCCACTGTGTGAAGATTTCTCTGCCTGACCAAATTAACATCAGTAGAGAGCACAGCAGCAACATGCTCAATAATAGCTTCAGCAACATAAGAACCCTGCACTTCTCCAGGACCCCGCATTGCGGATCTGGTTGCAATGTTTGTTTTGCAGATTCTTGCATCATAGGAGAAGGCACCCCAATTATATTTCTTCAGAGCCTCTATGAAATTGTGAGGAATCACTGGACTAACATCCTGGGTTATTCCGGCATTTACCAACAATTCTATATGTAGCGCTGTGATGTTCCCATCGGATTTGAAGCCTACAGAATAGCGTATTTTCATGGGATGCCGGCCCCCAGTCATTATCATGTCAGTCTTGCGATCAAGATATATTCGGACAGGACGCTGCAACTTAAATGCTGAAAGTGCACAAGCTGTTGCCACTGGTAACGATCTGACAGCTTTGCCTCCAAAGCCACCACCAACTCTTCTAGTAATAACACGGACATTATGACAAGGTAAACCCAGGCATTTTGCAATGGTTTCTTGTGCTACCTCCGGGCACTGGCTTGAGCTATACACGACCATACAGTTATCCTCCTCAGGTATGGCTAGCGCAGTTTGTGTTTCCATGTAAAAGTAATACTGCGAGTGAAGGTTCACCTCAGTTGAATATATTTTCTGGTCAGCTTCTTCCATTCCTTTTGAGAAATCACCAATCTTTTGGGGAAGAAGAAATGGTAGGATTTCAAAATAACTACTACTTCTCACAGCCTCCTCAATTGATAAAATTGGAGCATCTAAATTTTCCATGCTGTAGTCGACCAATGCTCGACTGGCAGCTATATTGGCAGTTTTTTGTGTCTCTGCAACCACAATACCAAGTGGTTCCCCAGCCCACTGAGTGAGTGGATCACCAAACAGAGGTTCAGGTCCAAATATAGTGTTGGCCCCAACATTGCTGCCTCCTTTAGGAATATCCTTGGCAGTAACAATCGCCACAGTTTTTAGCTGCTCGAGAGAAGGGTTCAGTTCTATGCTCTTCACATGAGCTAAAGGTTTTGTGCTATATACAAATGCTCCATGCAGGCAGTCTTTTGGGGAAGGGATGTCATCCACATATATAGCCTCACCAGAGGCTTGTAGTTCTGCTCCAACTTTCTTGGCTGGTAAGCCAACCGGGAGATAGTCTTCACTGATCTCGATGACCTGTTTGGATGATTCAAGTATGCGATCATTACCATGTAAATCAGATTTCACATTATTGATCTCCTTAGGTGAAACATCAACATGTGTGTCGGGTCCACGATTCATATTTCCATTGTTATCAGAAATTATATGGCCGTTCAGGTGGACCGCCTCTACAGGCTTGAAAGTTCCTTTGGTTATTGGATAAAGAAAACTAAAAAGAAAGGCAACAGCTAAGCTTGATCTGTAAGCAGCATGTCTTGTACCTTCCCCTGGAACAATTGTTTTCTTGAGAACCGTGCACGCTTCTAGTAAGAGTGATGCAGTGATGGGTTTACCCACTAAGAGACTCTCAACATTTGTAGCCCTGACAGCATGTTGTGTTCCATATGCACCAAAAGCCAAACATAGCTTCTCCAATATACAGTTTCCTGAAGTTTCATCTGAAGATAATTTAGCCAGGAATGCAGAATTAAGGTATGAAACAGCATTTCCAATAGGCCGTGGGGAAGCTCGGTATGTCTCAAATAGCACGGAACTTGCAGGTTTATCTCCTGTCTTATTTACAGATTCAGAACTTGATGAGATGCCACTTGGAGTGCAGTGAGGAATGTAAATTCTTAATAGCAACGTCTTGCAATCACAAGGGGCCATGTCCAGGAATCGCTCCAGTGTGACATTCATCCTTTCTGATGATACCTGGATGCACAGTGATGAACCAGCAGCAAGCAGAACCGTTGCAATGTCAGAGGCAAACTCATCCCTCTGAGCCATTATCAGATTTCCACCCAAGCTCGCCATGTTCCGGACAAACTGAGAAGCCACTTTCTCCATGTGATCAGCAATCTTGCAAAACACCACGTCCTTGTAGCTGTTGCCTTCTCCTCGTAAAATCTCGATTACCTGAGAAATGGACATTGCAGCCCCAATGCCAACACCCTTGACATCCTTGCTAACCGAATTCAGTTCTGGAATGGCTCTCAAGTCTATGTACCTATCATACAGCTCTGCATCCCTGTAAACACCAGAAGAAGTGTTGCCCACAACCACCTTTGTTCTACTTTTATCAGATGATGATGACAAAGAACCTATCAGCTTATAATACTCCTCCACATTTTTAGGTTGATACCAAGAGCTCACACTCCCCACCATAGATGCTGACGAAATGGAATGATCAATCCCCAATGAAGATCTGATTTCATCCTTCAAGAACTCCGGGAACGCGGCGATGCTCCTCTCCTTGTAAGGCGGCAACTTGGAGACACTGGCAGTGGCATCGCCCTTGTTCCAGAAGCAGTTGAGCCCCAAATCCTCCAAGTCCACGTCGGCGGCGAAGCTCTTGCACGCGTCGGCGATCGGTCGGTACCCCGTGCAGCGGCACAGGTTCCCGGCCACCGCGCGCTCCGCCTCGGCCGCCGTGAGCCTCGAGAACCCCTCCGCGGCGGAGGCGGCCTTCTTCCCGTTCCCCTCGGCGGCCGCGAGCGCGCCGGCGAGGGACATGCACACGCCGGGCGTGCAGAACCCGCACTGCGAGGCGTGGAAGCCGGCGAGCCGCTCGTGCAGCGCGTGGAGGCCGCGCCGGCTGCTCCCGAGCCCCTCGGTGGTGGTCACCGCGCGGTGGTGGAGGCCGCGCGCCAGCGTGAGGCACGAGCTGACCGCCGCGTGCGCCACCTCGTCGGCCTCCGCGTCGTACGCCGAGACCACCACCACGCACGCCCCGCACCCACCTTCGCCGCAGCCGAGCTTGGCGCCGGTGAAGCGGGTGCGGGAGCGGAGGAACTCGAGGAGGGACTCCCCGGGGTCGCCCCCGTCACGGCGGAGCTCGAAGCGCTCGCTGTTGACCGCGAATACCACCACCTCCTCCCGCGGCGGCGGCGGCGAATCCATGGCGGTGGTGGAGGAGGAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0367200.1 | 7 | 3472508 | G | A |
| Osa07LNT0367200.1 | 7 | 3472654 | T | C |
| Osa07LNT0367200.1 | 7 | 3474023 | T | C |
| Osa07LNT0367200.1 | 7 | 3474124 | A | G |
| Osa07LNT0367200.1 | 7 | 3475560 | A | T |
| Osa07LNT0367200.1 | 7 | 3476157 | A | C |
| Osa07LNT0367200.1 | 7 | 3477753 | T | C |
| Osa07LNT0367200.1 | 7 | 3478559 | T | C |
| Osa07LNT0367200.1 | 7 | 3478850 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0367200.1 | osa-miR5537 | Cleavage | 4.5 | 16.28 | 1 | 22 |
| Osa07LNT0367200.1 | osa-miR7692-5p | Cleavage | 5.0 | 22.024 | 1 | 24 |
| Osa07LNT0367200.1 | osa-miR530-5p | Translation | 4.0 | 17.723 | 1 | 20 |
| Osa07LNT0367200.1 | osa-miR1861n | Cleavage | 3.5 | 15.638 | 1 | 22 |
| Osa07LNT0367200.1 | osa-miR1873 | Translation | 4.0 | 13.394 | 1 | 24 |
| Osa07LNT0367200.1 | osa-miR2092-5p | Translation | 5.0 | 14.451 | 1 | 21 |
| Osa07LNT0367200.1 | osa-miR2098-3p | Cleavage | 5.0 | 18.349 | 1 | 20 |
| Osa07LNT0367200.1 | osa-miR2101-3p | Translation | 4.0 | 14.001 | 1 | 22 |
| Osa07LNT0367200.1 | osa-miR396f-3p | Translation | 4.5 | 20.123 | 1 | 24 |
| Osa07LNT0367200.1 | osa-miR2926 | Translation | 4.0 | 21.248 | 1 | 20 |
| Osa07LNT0367200.1 | osa-miR3982-3p | Translation | 4.5 | 16.552 | 1 | 21 |
| Osa07LNT0367200.1 | osa-miR5144-5p | Translation | 3.5 | 18.153 | 1 | 21 |
| Osa07LNT0367200.1 | osa-miR5161 | Translation | 4.5 | 15.154 | 1 | 20 |
| Osa07LNT0367200.1 | osa-miR5338 | Cleavage | 4.0 | 13.147 | 1 | 21 |
| Osa07LNT0367200.1 | osa-miR5492 | Cleavage | 5.0 | 12.683 | 1 | 21 |
| Osa07LNT0367200.1 | osa-miR5513 | Translation | 5.0 | 12.713 | 1 | 21 |
| Osa07LNT0367200.1 | osa-miR5517 | Cleavage | 5.0 | 22.307 | 1 | 21 |
| Osa07LNT0367200.1 | osa-miR5518 | Cleavage | 5.0 | 15.993 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0367200.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0367200.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0367200.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0367200.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0367200.1 | 7 | qSNC-7 | Resistance or Tolerance | Salinity tolerance | C1057 | R2401 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)