© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0367300.1
GCTCCATATATGTGCAGTAAATGTTTTTACAATCTTGGTTAAATATTTTTCACATCCACAAGTTGACCAAAGAATGAGAGCAAGTAAAATGAAGGGCAATACTGAAATGAATGAAAAAATTAGCAAGTAAATGAGTGCAAATGCACCACAGTTTTTTGAGCTTTTGATTGCATCAACCAAAGAGATTTTGGCAGGAAAAAAAGGCATTGCCAGAAGTTAAGGCAAGCAGGGGGTGATCTCATACAACCTATACATCCATCTGCCACAGCTATAGATGAGATCACTTCTGCGAAAACGGAAGCAAAGAAAGGTTTGAGCTTTATTCTGACTAAAGGAACCTAGTGTTGGGTGAAACTGACTGTACATTTGAATGTACATTGAACCACTGAAAATGTGATGGTGAGCCTAAGAGAGATCAGTAACTCTTGAGAGATGGCTGCCATGGTCATGGTCATCACTGGACCTGTGGCTTGACAATCCTCACGTTGCTATAGAAGCGCTTGAAGTCCTTCATCGCCTGCTCTTCAATCTGGATCGAGCGAATCGAGGACGGAGCGTCGGCCTCTGGCTTGAACCAGCGGTTGGGAACATTGTCCTTGATGCCACCAACCTCAGGTGATGTGCCCTGGGAAGGTATAGCGAAGCCCGATGTCCTGGTTTTTGGACTGTGGGAGATGCCAGTTTGCCGTTTCTCCTGTTGCATCTGTATGTCCCTGAGAGAAGGCCGCAATACATTAGGTGAGGTAGCAGAAGACGACCAGGATAGTGTGCTCTTATCCCCTTCAGAAGCAGGCACGACACGAGCAGGTGTGACAGTTATCGGTGTAGAGCGTGCATCAGGTATAAACGAAGAAAGTCGCATGCGCCCAGCACTGTCAGGTGAGTCCTCAAAGCGGTCTTTTGCCTTGGCCGTGATCGGCTCGTTTGTTTTCCTCTGCTCGCTTTGAATATCTCGAAGGGAAGCAGATCCCTTTGTTACCTTAGCACCACCCCAGGCAGGACCTTCATGCTTTGGTGTGACAGTCACAACAGGGGTAGGCGGGCTTGGTTTTGGGGTGTCATCAAGAGCACCACTCAGAAACAACGATAAGCCACCTTTCCTATTCTTCTTCTTTGACGAAGTTGGCTGGGAAGCTTTGTTTTCCAATGGACAAGAGATAGCCTTTGTGTTAATGAAAGTGACATGCTCTGAGGGTTTGATTGAATCAGCAACGCTTGCTTCCTTTTCTGCAGAAATATGGACTGGTAAGACTTCCTGAAGATCCTTGACATAGATTTGGTCCCTGTCCTCCCTTTTCACCAAGGGAGTATCAGAATGTGCTGCCTGCTTGTTTTTCCGCTTCTGTTTCTTAGAAACACTCGATTTCTTGTTTGTCTTTTCTTCTGTAACACAGACTGGAGTTCTTAAATCTGTGGGAATGCCGAGTTCTGCAAGTTCACCCTCAAGGGCAGCCCTTGACTCAAGCTTTGCTAGCTGCTGATTATCAAGCTGATGACCATCCAGTTGTTTAGCCTCGAGCATCTCAATCTGCTGCAGTTTCTTGCGAAGTGCCCTGATCTGTTTAGAGGCAGCTTGTCCAGCATTGCTATCTTTCTCAAGGAAGTTCCCATAACTTGATATTCCATATGACTTCGATGCAGACTTCTGACTGTCCCTGAGCCTAAGAAATCCTCCTGCTTCATCTCCCTCTTCATCACTATCAATGACAGCAGGATAAGTAGCTGTCACTGTGGGAAGGCGACGATGACTCCATGGCTCTGACGATTTTTCATCCAGCAATCTCTCTAAGTTTGCAAGAGTTTCAGGAGAAGCATTCATAACTGATGGAGCTGCCACTGTGAAAATGTAATCAAGATTGCGAATAGCTATATCCTCGCAGTGCTTCTTGAGCTCCTTAGCTTCCAAGGACTCGGCAACTTCAAGAAGTTGTATAGAATTCTTTGGCTCCAGAATATGCTCAATCGCAACTTTCTCACATAAGCTCTTCAGGCTAGGTGCTCCCTTTTTTATTACACCATCGCTTCCAGATATACCGCTGTCAGGCTGTACATCATTAAACATGATGTCTTCATCCAATTCTTCCATCCCACCATTCCATTCTAACATGGCTTTCTTGCATTGGATTTTAGGTTTGGGTGGGTACTCAGGATGGTATATGCTAGAAAGCACAAGCATATGTGTTTCACCAACACAAACTGACGTTGCTCGCTTAACACCATGCACTCGAGTAAACATTGGGAGATCATCCTTATGTTTCTTTGCATCCCACATAAAAACATCACCACCTGCGGTAGCCAATGCAGTCCAGTATTTTCCAGCTGAGATGTTCACAACATTCCTTCCACACATAGAGAATATCTGTCGGCATCTTAAATCAGGGTCCGATGAAACCCAGTAGAAAATAGCACCATCTGCGGTTAAAACAGTGGTGTGCATCACTCCAGCAGCCACTGAGATCACCTGAAGCCGCTCCATACGATGGAACTTCAGGTTTGTATTTCCACCCTTCTTAAGACATCTAGATATTACAGCACGACGTGGAGTCACAAGCCGATGACCCCAAGTAAACACCTCGCCATCAGTTCCTAATGCTACAGTATGATACTTTGCTGCAGACACACATTTAAATGCTTTTCCTTTCAAGTACTCGACCATTCTTGGAATGCAGTTGGATGCTGAATTAGAAGTGCCATAACCTAGCTGGCCCTCCTTATTGCTACCCCAGGTGAACACTTCACCAGTATCAGCAACAGCAGCTGAGTGCTTGTTGGCAGCAGCGACAGAAATAATCCTTGCTTTCAGGGAACTAACGCGCCGTGGTGTTGGTTGGGTATCCACAGAAGGGTAACCAAGCTGGCCCTCTCTATTTGATCCCCACGTAAACAACTCCCCAGCCTCTGTAGCAATCACAGTATGATGTTTCGCTGCTGCCACAACATTCACTCGTTTACGGCCTAATCCTACTGTTACTTGGCGAGGAGTAATCACAGCAGTTGTCTGGCCACTGCAACAAATTGATGATTCACAGAATAAAATCCCTCAACATGGAAATTTAAACAAAGAAAATTTCAGACCTAAAACTTAGTGGCTTTATTAATAGCCTATGGATATCTGGATGACCAAGACGACCACCTCGACCAAATCCCCATGTGTATAATTCACCATCAGAACTAACTGCTACACTGTGGAACTTTGATGCAGCAACTGTTTTGATGTATGACCCATGCAAGGCATCTACTTTGCATGGTAGTTTTTGTATGTGGGCATTGCCTGTTCCCAGCTGATAATTTGTCCCACTTCCCCAACTGAAGACTTCCATTGCAACTGAATCAGGAGAATCTCCATTGGCCTGTGATACAGGGCCTGAGAGAAGATCAACAGGTGTACGTCCCTTGGTGTCTTCCAAAGCAAGGGATGCTCCAAACTGTAGAAGAACACTAGCAACACACAGGTGGCCAAAATGAAGTGCTCTGTGCAGGCTGCTCCAGCCAGATTCTCCATCCCTTGCATCTGGATCAGCACCAGCATCGAGGAGCCTCCTCACAATTGGTAGATGATTTCTCCACGTTGCAAGGTGGAGAGCACAAAGACCAAACACATTTCTGCCATCAATGCTTCCACCACTCTTTTTCAACAAAGCTAAAGCAGATTCTACTTCAGCTATTGATCCTTGCTTGGAAACAAGACACAGATCCTTAAGAGAGTTTCCAGGAGAAGGTCTACGAAGACCTGCTTGCTTTGATGAGCCTGGTGGAGATATCGATGCCTCCATGAGACCTCAGGAAATCACGAGTATCTGATAAAAGCAGGTAGGCTACTGAACTGCTTGGGGCAAGTCTTTCACAACGGCAATGCTATTCTGGGCTGTTTCACTTCTAATGGCACAGCTAAAGTTTTTCCTAATAAGATTACAAGTCTGGTGTAATTACAATTCTATCTCCTCATGGAGAATTGGGGCATCATCTCTACTATGTAAGACTGTTTTGCTAACCTAAAGAAACTGCCAAAATAACCTAGGACAGCATGATGCTAGAGCTTCATCTTGTAATAAATTGTTCTTGTTAGAGTTCCATGAAGCTAGGATGACAATTCCATCTCAAGATAAGATTCTATATAAAGAGCCATCTATATAATATAGATCAATCTTGGGATTGGACCCAGCCAAGAAGAACTCTCGTCAAGAACACATGCTGTCCTACGCCATCTCTCCCTCCCTCTCTCTCTCTGTGGCACGTATATGCTCGCGGGGGGGAGGGGATCCGGGCGGGGAATAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0367300.1 | 7 | 3492878 | A | G |
| Osa07LNT0367300.1 | 7 | 3493855 | C | T |
| Osa07LNT0367300.1 | 7 | 3493945 | C | T |
| Osa07LNT0367300.1 | 7 | 3496448 | G | A |
| Osa07LNT0367300.1 | 7 | 3497872 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0367300.1 | osa-miR5512b | Cleavage | 4.0 | 16.912 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR399e | Cleavage | 5.0 | 20.809 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR399f | Cleavage | 5.0 | 20.809 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR399g | Cleavage | 5.0 | 20.809 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR168a-5p | Translation | 4.0 | 21.985 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR444a-3p.2 | Cleavage | 4.0 | 18.327 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR530-3p | Cleavage | 5.0 | 14.459 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR444b.2 | Cleavage | 5.0 | 18.327 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR444c.2 | Cleavage | 5.0 | 18.327 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR444d.2 | Cleavage | 4.0 | 18.327 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR444e | Cleavage | 4.0 | 18.327 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR444f | Cleavage | 4.5 | 18.327 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR1861n | Cleavage | 5.0 | 12.447 | 1 | 22 |
| Osa07LNT0367300.1 | osa-miR1864 | Cleavage | 4.0 | 24.219 | 1 | 24 |
| Osa07LNT0367300.1 | osa-miR1866-3p | Translation | 4.0 | 17.132 | 1 | 22 |
| Osa07LNT0367300.1 | osa-miR1320-5p | Cleavage | 4.5 | 20.035 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR2094-3p | Cleavage | 5.0 | 19.714 | 1 | 22 |
| Osa07LNT0367300.1 | osa-miR2864.2 | Translation | 4.5 | 20.745 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR2868 | Cleavage | 5.0 | 19.079 | 1 | 20 |
| Osa07LNT0367300.1 | osa-miR2863b | Translation | 5.0 | 15.432 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR2921 | Translation | 4.0 | 18.846 | 1 | 24 |
| Osa07LNT0367300.1 | osa-miR3982-3p | Translation | 4.5 | 19.649 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR5080 | Cleavage | 5.0 | 10.428 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR5489 | Cleavage | 4.0 | 24.747 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR5490 | Translation | 4.5 | 19.02 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR5492 | Cleavage | 3.5 | 16.817 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR5512a | Cleavage | 4.0 | 16.912 | 1 | 21 |
| Osa07LNT0367300.1 | osa-miR2275c | Translation | 4.0 | 17.833 | 1 | 23 |
| Osa07LNT0367300.1 | osa-miR2275d | Translation | 5.0 | 15.617 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0367300.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0367300.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0367300.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0367300.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0367300.1 | 7 | qSNC-7 | Resistance or Tolerance | Salinity tolerance | C1057 | R2401 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)