© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0368100.1
CCCAAATCCTCAAATCCCCAAATCGGCCATATCCAAATACATCACAAAATCTTAAAAAAAATTACATCACAACTTCTACAAAATTCATCACAATACATCACATATTCACATCACACACAAATCAAATACACAGATCCGAATCATAAATTCTAAAAAAAAGAAAAAAAAGCCTGCTCCCACGCCGCCCGCCGCCGCGAGGCCTCCGGCCGCCCGGCCCTCCGCGCTGCCCGGCCGCCCGGCTCATCCATCATAGTGGGGATGATGGGGGAGGGAAAGGAGGAGAGGAGTTAAAAGGAGAGAAGGAAGAGGAAGAGATAAGGTTAGAGAGGAAGAGATAAGGCCACCCGTCTCCTCCTCGATCTTGCACATGCCTTGTACTCTTCGCCGCGCATGCCGATCTTTTGTTTCGGTTGATGTTACCAACCGGGACTAGAAATAGATCTTTAGTCTCGATTGCTGTAATAAAGATCTTTTAACACCAACCGAGACTAAAGATAAAAAAAAGAGTAAATTTCATAAAACTACATATAGTTTGTACGATCTATCACAAAACTACATATTTAAAAGCTTGTTTAAGAAAACTATAGATTTAGTGTCTACGTTTATCACAAAACTACAGGCACTTTGCACAATATATCACAAAACTACATATTTAATATCTTCATTTATCACAAAACTATATGTTTTAGCGTTGTTAAAACCTGTAGTTTTGTGATAATGGAGACACTAAACCTATAGTTTTGTGATAAAAGAAGACACTAAATGTGTAGTTCTGGGATAGACGAATACACTAAATCTATAGTTTTGTGAAATAAATTCTTAAATATGTAGTTTTGTGATAGATTATATAAAGTACCTGTAGTTTTGTGATAAAGTAGACACTAAATCTATAGTTTAATAAAACAAGATCTTAAATATGTATTTTTGTGATAAATTGTGAAAAATACCTGTAGTTTTGTGAAATTTACTTAAAATAAATAGCTCTAAACTTAACCAGCAGTTTTTTATTGCAACCTGACTATTGTGGATTTTGACCGACCGATCAAAGATAGTTTCTCCATCAGAGTGCGTACATATATTCAATGTAATAATATAAAAAAAATTTAAATATAAAAGTATTTAAACTTGAACGAAATAAAATCACCTCACGGCAGGAGGTTAGGCTTACGCCGGACGCCGGTGATTCCCCCGCAGTTCTCACGTGCGTAATCCGCAGACGTAAGGACGGAGGGAAGTGAATGCTACTCCCTCCGTCCTATAGTATAAGGAATTTTAAGTTTTTACTTGCAACGTTTGACCACTCGTCTTATTCAATTTTTTTTTGAAATTATTATTTATTTTATTTGTGACTTACTTTATTATTCACAGTACTTTAAGCATAATTTTTCGTTTTTTATATTTGCAAAAAAAGTTTGAATAAGACGAGTGGTCAAACGTTGCAAGCCAAAACTTAAAATCCCTTATATTGTGGGTGGGACGGAGGGAGTAGTAAAATGGATGAGCTTGGAGTTCTCCCTGTCTCTTTCCTCCCAAAAAAAAAATAAAAATGGAATTACAGTTACACCCAAACACAAGAAAGCAAAACAAAGGTTGCAAGTTTCTCTTACTGACAGAATAAATACAGCGGAACAAAGGCCTATTTGGTTCTCTACCCTACCAATTACCAATTACCAAAATCTAGGCACTACCAATTTTTTGGTAGACAAAGTTAGCTAGTATATGTTTGGTTTAATACCAATATAAAACCAAAATTTAGTATGAGTGAAGAAGATTCTAGAATATAGCCAAATTGAGCGTGGGAATTACCAATTATTTGGCTTCAATCCAAACTAGCACATTTACTATTAAACTTAACAAAATTTTGGTAGGGTCACGTTTTGGCTTCAATCAAAAACGGCCCAAAAATTCGCCAAAACGAAGCACCAAGCTCGCATAAACTCTAACGGGCGCTCGATCCGGATTCATCGCCGAACCCCCAGTTTTCCATACAACAATGCCGCCTTCCCTAAGACTCCCCCGACCACCTCGACACCAAACCCTAACCAGGCCGCGGGGACCATACCGCAGCGCAAGCGCACCGACACGGCGCTGGACGAAACAGCAGAGAATGAGACTACGAAACTATCCGAAACAAACGAAGCAGCACGAACACAGCAGTAAAAGTTCCCAGAAGCCTTCGCACCCGGGCAACGGCACGGAAAAGCGATAAACAAGGGGAAGGGGAGAGGGGAATCACCGGAAGAGGCGCCGAATCCGACGCCGCCGGCGCTGGCCCCTCTAATCGGCCGCTCCAGCGACCTCCTAGAAAGCCGCGAGGGCTCCCGAGCAGCGCAACCGGAGCCACGGATGCGGGTGGAGAGGAGGAGGAGGAGGAGACCACGGTGGAAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0368100.1 | 7 | 4112504 | T | C |
| Osa07LNT0368100.1 | 7 | 4112633 | C | T |
| Osa07LNT0368100.1 | 7 | 4112794 | T | A |
| Osa07LNT0368100.1 | 7 | 4113020 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa07LNT0368100.1 | DTM_#DNAt_MULE_japo_Os0086 | Chr7 | - | 4111758 | 4112222 | 464 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0368100.1 | osa-miR812s | Translation | 4.5 | 7.709 | 1 | 24 |
| Osa07LNT0368100.1 | osa-miR5799 | Translation | 3.0 | 7.709 | 1 | 24 |
| Osa07LNT0368100.1 | osa-miR5835 | Cleavage | 3.0 | 12.966 | 1 | 24 |
| Osa07LNT0368100.1 | osa-miR5835 | Cleavage | 3.5 | 13.651 | 1 | 24 |
| Osa07LNT0368100.1 | osa-miR812a | Cleavage | 4.0 | 8.023 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR812b | Cleavage | 4.0 | 8.023 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR812c | Cleavage | 4.0 | 8.023 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR812d | Cleavage | 4.0 | 8.023 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR812e | Cleavage | 4.0 | 8.023 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR818a | Cleavage | 2.5 | 21.957 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR818b | Cleavage | 2.5 | 21.957 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR818c | Cleavage | 2.5 | 21.957 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR818d | Cleavage | 2.5 | 21.957 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR818e | Cleavage | 2.5 | 21.957 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR1435 | Translation | 3.5 | 9.47 | 1 | 20 |
| Osa07LNT0368100.1 | osa-miR1854-3p | Cleavage | 4.5 | 1.104 | 1 | 22 |
| Osa07LNT0368100.1 | osa-miR1862e | Cleavage | 4.5 | 11.313 | 1 | 24 |
| Osa07LNT0368100.1 | osa-miR2099-3p | Cleavage | 4.0 | 10.986 | 1 | 20 |
| Osa07LNT0368100.1 | osa-miR2105 | Cleavage | 4.5 | 0.875 | 1 | 20 |
| Osa07LNT0368100.1 | osa-miR2864.1 | Translation | 4.5 | 8.94 | 1 | 21 |
| Osa07LNT0368100.1 | osa-miR5160 | Translation | 5.0 | 22.866 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0368100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0368100.1 | 7 | qSNC-7 | Resistance or Tolerance | Salinity tolerance | C1057 | R2401 |
| Osa07LNT0368100.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0368100.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0368100.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0368100.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)