© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0033900.1
AACGGAGAGAGTATATGATATGATCAATTTAGGAAGGAGTGAGTATATTTTGACACTGAGAGGATAGTTTTTCTTTTAAGTAGATGAATAGAAATTCGGCATCTATATCCACAGCCAAAAGTTACATGGATAAAAAAATTCAGGCCCCAAAACTAAGAAGCAACAGAATATAGCAAAGAAAAGACGAGAAGACTAAGCTTCGATCTTTAGCTGCCTCACGAACCCTGTCGCGCTAAAAAACCGCCCGCTTCACGTACCCTGCTGCGCCAAAAAACCGCACCGTCTTGATCTTGATACACAACTCTCATCCATATTTCATTCGTCACTATGTCCCTAAAATCGGCCGAATCCCCATCGATTCAGATCTGACAATTTCCAGTCCCTAGTGTCTTCGCTCACCGACGCTATCCAGTGGAGACAGAGAAGAAGCCCCTCCAATATAGTTTTGCACTGAAAGACCTACTTGGGATACTTCTCCAGGCTACTAGTTTTTACATTTTGTTTATGAACGTTTGACTAATATATCATAACATCTCAATCGATCATGAAAACAAGATATCAATTCTACATGTTACACCCTTTATTTCTCTGAACTACACGCCGCACCTTGCAAAATTTAGAAATACACCTAAGCCTATTAAGTCAAATAGGTGGCAAAGTGACCACCCACCTTTCTTTCTTTCTTTAATATTCAGAGATACACGGCTGAACAAAATATTCACAGTTTTAAAATTGGACAAAGAGTCCAACTTACAAGTATTCAGTTGACAGAAGAACACGAAACCTTCGAGGAGAAAAGCAAGCAAGCCACTCTGGTACTTAGAAGCAGAACCTCTTTTTCCGAAATTGAATATTCTTTTGCTGGTCGGCGTATGCAAGCAGTTCGTCCAGCCTCATCAATGCATCATAAAGCATCTTCTTTGTAGATATTAGCTCGGCTTCCAATGCATCAACACGGTGAATGGCTCCATTGAGCAATTCCTCTCTATCCGGTGGCATTTGAGATTGCTTTGCTTCAAGCTCCTGTAATTTCTCCTCCAATTCACCAAGACGTCTCAATACAGACGAATGTGTACTGTTTTCACGGGAAATGGCCTGGCTTGATAGACTTGCAGTCACTCTGCTTGGGACAGAACGAAGCACGGCAACAAAGCTCACGATTAAGACTATCAACCACGCAGTAATTCGATTTCGAAGTCCTCCCAGTTCCATCGTTATGTTTCTCAACGAGAACGAATCTGAATTAAAAGCCATTGAGCTGGTTGATGGACCGGCGCATGTGTCCACAGCCTTGTCAACAACAGGGATGTCCTCTACTCTGGGAGGGGCACCAGATGTGGAAGTATTTCCCGGCAATTTGGACTCGTCAACGGGTGTCAAATGAGGGTTTATGATGGGGTTAACTGAAGCTATAGGAGATGAAACATCTTCCATTTCAGAACTAGACTCAGCAGAGGCATCGCTGCATTTTTTAGTTAAGTGTCTAGGGTTAATATAACATATTTTCTTCCCATCAACGCTTGATATAGCAAGAATTTTCCGTCCATAGTTTGCTTCACCATTAAGGACCCTCTTTATTATGTCAGGATCCTTCCAAGGACCTTTATCTGATTTTATGCAACCTCCATGTTCTTCACACCTGCATTTGCCACCCAGAAAATCTGGAAGTTCACTCTCATCAATAGTTTCAAGTAGCTTATTTTGGTATTTGCTTCCAAGGACATGAATCTTCGAAGCAGTTTGTGGATCAAGAAATGATTTTATTGTACCCCATAACATCTTGAAGCCTTGGCCAGCATTTATAATGTACAATCGGTGCAAGGTCTCTGGATAGTTGTCATTGTTGATCTTCTGAAGTCGCATGATTAGCTCTCTTGCATCTTTTGAGAAGTTCTTCAAACCCACTCCTTGCACATCCAAGATAGTACTGCACGAATCTATGTGCCTTTTTGCAGCAATGGAGCAAGCTGGAAACCTCATCTGCAAGCACTTCTCGGACTCCTTGACATGATACTTTACATATCTGTCAATAGTTGTGACTTGTACTAATTTGTTGGGATCAACTTTTCCAATTAGTTCTATGTAGACAGGCCTTCCCTCTTTATCCACACCATGGTAAAATTGTGGATAGCACTCCAGAACATCATCTAATTCGCTATAGTCAAATTCCTCTATGTTGTCAGCCCCGAACTCCTTCCTCCATCTAAGCATTTCCGACCACATATGTTTTGCTTTATCAATATCAAATTTTCGCGCTTTCAGGAACCTCAACATCACGTGATAATCATCATGACGTTCTGGCAACAAGCCCTCATCATGTAAGCACTGGTGAAATCTTTGGACAGCTTCCAGCTCCTTGACATCCCTTATGTCCTCTATAGAGGCTACATGGTCGCCGACCCTCCTTCTTCTCTTCCTTCTCAAGGAACGCCTAAATTTATTTCCAGCACTGATAGCTCGGTTCTTGAAGGAGACTGCCTTGGCCTTTTTGTCACCTTCTGAGTTGTCCTCATCGGATTTCCACTCTTTCTTATCATCATCATGCACAATGCCTTCAAAACCTGCACAAAGTTCTTCTTGATGTTTGGCTTTATGCACTTCAGGCGGGACTAGTATGTACACCTCCCTTCAGGAACTGTTAAATCATGTTCTTTTTCTTTGCCCGGAACATGAAAAGCTGATCTCTGTATTGAGCAGCATCTTTGTAGCGTTCCTCAACAGCAGCGACCAGCATATTGCGGACCAAATCAAACTCTTGGGCCTCAAAGCAAGGTTGATCGTCAGGCCTGTCAAGTCTTGTGTATTGGAATTGGTCTGAGCTTACATAGCTCTCAGATGGTGTTGGTTGTACAACTTTCAATCCATTGTTATACGCTATACGCCTATTCACTTGTATAGGAACCTTACACCGGAAAGCAATGTTGATGGCATCTGATGGCTTGAGATCTAAGCTAATAGTCTCCTCTTCATTGCCAATCTGGATATCATGACACCATACTTCAGACAAAAGTAAAATAGATACTCCCTCCGTACTCGTAAAGAAAATCGTTTAGAACAATGTTTAAGTCAAACCTTAGGAATATAAATCATGAATAACTCTCAAGTTGTTGAGTTTGAAAATGTAAAAATTATATGAATAGATTTGTCTTGAAAAATACTTTCATAAAAGTATACATATATCACTTTTCAATAAATATTTTTATAGAAACAAGAAGTCAAAGTTGTGTTTTGGAGACCGTGTTGCTGTCCAAAACGACTTCCTTTACGAGTATGGAGGGAGTAGTTCATGTGAAGTCATTTTACCTTAGCAAGATACAATCGAGAATAGTATGCATCATGGACCATTTCTGTAATCCGCACCAAACGTACCTAAAGGGAACAGATCTGAAGTAATCAAGTAACTGATAAATGAACATATTATATGACATTTAAGAGAACAGATCTGCAGACCGTGAACTCTGGAAAACAGCTTTCCACTAGGACACTTTAGAAAAGATGTATGTATTGTCCGAGTGCATGATAACCAGCATACATTAAGTAATAAAACTAAAATAGTAACACACATAAGCACACCCATGAAACACTAAACAGAAAACCTAAACCATGAAGCCACACGAAAGTTGCAAAAGAAAGTCTGCTTATAAGATCTCATCTTAAACTCACCGCATATCCCATCCTTTCGGTCATCTCCTTTACCACATTATAAATAGTTGGCCTTGGAATTCGAATGTTCCGAAGGGCAGCCAGCAACATAATACTTGGTGTTTCCATGACGATAATTGGAAGCAAAAGATCACTTCCATCTTCCATCTTCAGAACAATAGCATGGTGAGGTGCAGAATCCCGCAATCTTAATACCCGCGGGTTGTTTTGGACACATCTAAGGTTTTTGCCATCACGCATTTTAATCACAAATCCATCAGATACACTTCTGAGCTCAACAGCCTCCATCACGCTGGAGTTGACGAACTCCTCGCCGCTGGCGTCGTAATCCGCGGCAGCGGCGCCGTCCCCGTCGGAAGACGAGCCGTAACTGCAACAAACAGGCCAGACCCAGCCGCTTCGCGCATGCCGCTCGGACGGGAAACCGAAGAACCTGCGCGCCGCCCGGTAGTGGTCTCCCTGCAACCCACAGGCTCGTCTCCTCAGGTGCACGCGCCTAAGCAGCTGCCCGCTGATCTTCGCGTCGGAGGTCAGGGCGCCGGTCGCCGGAGCAGCATAGCGCGGGAGAACCGGCCCGTTGATGATCTCCATCCACCGATCCTGGCGGGGAGAAGGGCCTGAATGCCTGATCCGAGCTGAAAGACGCAGGAATTTCGGAGGATTTTGGTAAAGTTTTTGGCTCGAAAATTTTTTAGCCAAATGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0033900.1 | 1 | 29066641 | G | A |
| Osa01LNT0033900.1 | 1 | 29066643 | G | A |
| Osa01LNT0033900.1 | 1 | 29066668 | A | G |
| Osa01LNT0033900.1 | 1 | 29066860 | G | C |
| Osa01LNT0033900.1 | 1 | 29067307 | C | T |
| Osa01LNT0033900.1 | 1 | 29067691 | T | C |
| Osa01LNT0033900.1 | 1 | 29068645 | A | G |
| Osa01LNT0033900.1 | 1 | 29068794 | A | G |
| Osa01LNT0033900.1 | 1 | 29070420 | T | A |
| Osa01LNT0033900.1 | 1 | 29070498 | A | T |
| Osa01LNT0033900.1 | 1 | 29071785 | T | G |
| Osa01LNT0033900.1 | 1 | 29072019 | T | C |
| Osa01LNT0033900.1 | 1 | 29073372 | T | C |
| Osa01LNT0033900.1 | 1 | 29074067 | C | T |
| Osa01LNT0033900.1 | 1 | 29074313 | T | C |
| Osa01LNT0033900.1 | 1 | 29072605 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0033900.1 | osa-miR5528 | Cleavage | 5.0 | 11.576 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR5533 | Translation | 5.0 | 17.758 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR5079b | Cleavage | 5.0 | 14.702 | 1 | 22 |
| Osa01LNT0033900.1 | osa-miR160a-3p | Cleavage | 5.0 | 16.834 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR160b-3p | Cleavage | 5.0 | 16.834 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR160c-3p | Cleavage | 5.0 | 16.834 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR164a | Cleavage | 4.0 | 12.445 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR164b | Cleavage | 4.0 | 12.445 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR164c | Cleavage | 3.0 | 12.445 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR164d | Cleavage | 4.0 | 12.445 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR164e | Cleavage | 4.0 | 12.445 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR166i-3p | Translation | 4.0 | 23.022 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR171h | Translation | 5.0 | 11.858 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR164f | Cleavage | 4.0 | 12.445 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR1861g | Translation | 5.0 | 19.685 | 1 | 22 |
| Osa01LNT0033900.1 | osa-miR1862e | Cleavage | 4.5 | 14.305 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR1882a | Translation | 5.0 | 18.811 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR1882b | Translation | 5.0 | 18.811 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR1882c | Translation | 5.0 | 18.811 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR1882d | Translation | 5.0 | 18.811 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR1882e-5p | Translation | 5.0 | 18.811 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR1882f | Translation | 5.0 | 18.811 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR1882g | Translation | 5.0 | 18.811 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR1882h | Translation | 5.0 | 18.811 | 1 | 24 |
| Osa01LNT0033900.1 | osa-miR5079a | Cleavage | 5.0 | 14.702 | 1 | 22 |
| Osa01LNT0033900.1 | osa-miR5147 | Translation | 5.0 | 22.914 | 1 | 21 |
| Osa01LNT0033900.1 | osa-miR5340 | Cleavage | 3.0 | 6.778 | 1 | 23 |
| Osa01LNT0033900.1 | osa-miR5505 | Cleavage | 4.5 | 8.576 | 1 | 22 |
| Osa01LNT0033900.1 | osa-miR5521 | Translation | 5.0 | 23.865 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0033900.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0033900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0033900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0033900.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0033900.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0033900.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0033900.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0033900.1 | 1 | qCC-1 | Physiological trait | Source activity | C122 | R1012 |
| Osa01LNT0033900.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0033900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)