© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0369300.1
GAAAATCCAATCCAAGTTATGCAAATCTTTATTAGCTCCAGCACTCAGGCTTCAAGACTGTACATAACTAGCAGACGATCACAACACACGCGAACATACGAACTAATTAAGTTGGCTATATTACAATGCGGAATATTTATTAGGCAAACCGGGAGAGCTAATTAACTAAGGTAGTGGTAGTACTTAAATTAACCAGCAGCAGAGCTAGGTGGTGATGACTGATGAACATGACAACATGTTTATTTATGCATCTCCCAACCAATCACGTCGTCGTCGCCGTCGACGACGACGATGACCTGAGCGTGTTGATGGTCTTCTCGAGCTCGTCCTTGTCGGCGCCGACGATGCGGCCGACCTCCTCGCCGCCCCTCGCCAGCACGAACGTCGGCATCGCCTCCACCCGCCAGGTCCGCGCCACCTCCGCGAGCTCGTCGACGTCGACCTTGAGGAAGGCGACGTCGGTGAAGCGGCCGGCCATCTCCTTGAACACCGGCTCCATCATCTTGCACGGCCCACACCACGACGCCGAGAAGTCTATCACCACCAGCTTTGTGGTGTTCTTGTGGGCGTCCCACAGCTCGTCCCACTTGGCCTTGGAGTGGACGGCCACCACGGCGGACTCGCCGCCCTCCTCGCCGGCGGCGGGCTTCGGCTTCGACGTCGAGAAGGCGCCGCCCATCTTGTTACAGTGAGCTGATCGAGGCACTGCAAGTCTGCAGCTGGAAGGGCTTGGGGTTCTTGGCTTTTGTAGGGGCTTGACCCCGTTGACTCATGACTCACATTTAATATTCTTACTTAGAGCATAAGTTCTCTTTACAAAATATTACAATATTTAATATTCTCACTTACCAACCTCCCACCTGTCCCAAATAAACCAACATCGTACCACCTCGTATCTTAGATGTGACAGTACGAGCTTAGTTTGTGATCATCGTACTGAAATATGTCATATCTAATATGAGATTAATTTATTTTGGGATAGAGGAACTAAAGCATAAGTTCACTTGTAGCATAAGAAAGAGGACAATACTAACAACTGAACTACTCTGCTCGTCTCAAAAAACCGCAGGCTAAACTCAACTGCTCCACTAGAAAAGGAAAACTGAAGGCTGCTGTACTGTGAGCTGTGGTTTATTATAGTGCCATTTTTATTAATTAAGAGTGCATTATCTAGAACACCTTGATGAGTACTGCTAGTAGGTGGATGAAGGTATCTGATTCATTGGGGGGCCGTTTGGTTTAAGGAGCGAGATGACCCATTGACCATATGCACATCAAAAGTAACAGAAAGCATCAGAATCCCGTAAAACTCATATGTTCATCTGGAACACTCCAATGTTCGATCTGTCATCTTTCTGTTGCGGAATTTAGGTCGACTATTATCTATCTAATCATCAAAGAATATTAGATAATGACGGAAAGAGACAAAGGAAAAGCATGCAAGGGGTTCATCTTTGAGAATTCAGTTCCCAGTCCACTAAAACAACTTTTGTCGATGAAATTTAAATCCAAATTTCAAACATAAAACCGTGGCACCTTACAACAATATGGATCTGAAGACGATAATTGAGCATATATCTATTATATACTAAATGATAAGCATGGAAATATACAACGATTTACATGCAAAGGATGGGACCGAATTAGATATGGTGCTATATACTTCTATCCTGCCGATATATATTACTGACAATAAATTCACACATGAGCTTGATCGTAACCTTAATTCATGGCTTTTCATCCCAATTAAATACTGCGTACTTGCCTTGGGAGGTTCCTCTCCTACTGCGAACTATATGTTGCCTCACGGCATCCTGATTGATGTGAAAAATGAATTTCATGTGCCTTATCTGAAGTAATGCATCAGAAATTAAGTGAGTGCATTCGTTGCATGGAACTTCTTTGCTATTGACGAAGATTGGAGCTTTTCCTATATTCGTTATGTGGAAAGATCCACCTTTATCCATCTTGATAATTGCCTGTTGACGGGATATTGTATTCGCCTTTCCTTCTTTTCCCAAATCGATGTCGACATGTTCCTCACTTGTTTCTCTCCCAAGTGTAACCTCTGGATCCTTTATGTAGTATTTCAAATGCTGGCCATAAAGAACTGCAAAAGCACCATGGGACATAATAGATCTGTTTGTATTAGAGCGGGCACCTCGTTCTAATCTTATCAAGTCTTTCCTACTTTCAAGAGACTGAAACCTGGAAACTTCGAGCTGGATGAAATCAGATTCTTGATCCCATGGAATTAAATCCTGATCAAGTATCAAAGCTTCTATGTCGAAATAGTTTGGAATACCGTCCTCACTGTCAGATCCTCCCCCTTCTGGGCTTGAAGTGGTTGTTATGGGATTAAGAAATTCCACATCTGGCAATGCATGCGCTGAAATGCTGTTTTGGGTAGTAGCATCACAACTTATTCCTGACTCATCAGGAACCTTAGAATTCATTTCATCAAGCACTCCAATACACTCATCCAAAGACACACTCCCCAAGTTATCAAAACATTCATGTTGCACTAAACCACATGTAGATTTTTTAACAAATTCTGCAGCAGAATGGAAAGTTGATGTGCATGCATTTGCATTGCTAGCATCAACAGGCATAACAGGTGACTTGCTTCTTACGGTACAAGATTCATTAAGACCCACCAAAGTTTCCTTTTGTTCCAAGGTGTAAGGTTCCAACTTCATTGTAAGTAACAATGGTTGGACATCACTAACCAAGTCGGTGTGATTCAAGTCAGCAGCATTTAGTGGAGGAATAGGTTTGGCAGAAACCAAATGCATATTGTGCTGTGAATTCTGGTCACAAGTAGAGGTGGATGCTACAGGCCCAGGTGTAAAGATATCATCATTGCAAGGGATTTCAGGATCTTCGGTGTTTAATATGCACACAATACCAGCACAAGGAAAAGGCACTTCTGTTGTGTATATCATGTCCACTCCAGAAATATCTGCCACATCATGCTTCTCATGGATTGGATCTGTGTTGTTACCACAGGCACTGCTTACATGAGGAATGTCCAGAAGGTGCTCTTTGGAGATGTCCTTCAGAATAACATTAGCATGTCGATCGCCTAAACCTTCCAGATTTGGGTCAAGAGAAGAATCCAAAATATTCTCGCTATTAAGTAGCTCAAAGTCTTCACCCTGACTGGCATCCATTAAGCATGAGTGCATAACTTCACCTTCTGTTGCATCGTCTAAGCCAGATCCAGACATTCCATTCTCCACATTCACCTTGCATGAAAATGTGTCAATGTTAGTAGTTTCCTTTTTCTTGTCATCAGAAAAGGCAAGAATTTCTTGCTCTTTGTGATGCACATCTGTCAGCATGTCAGGTGCATTAACACCCTGAAACTTCTTCCTAGTAGGAGCACTAGGTGCCTGAGAACACCAATGTTCACTCATTGCTTTTAGCGAGCCTGGGTCTTGCAATATTTCATTGCTGTTACCAGAAAACTGGTTCTGTTTTATGCAATCTTGATCAGTATTCAGTAAAGCCTTTAACCCTGTCATTCCATTGGCTGATTCTTCACAAAGAATTGGTTGCTGAGGCTGCACACAGTCCTGGACATCAGAAAGGTCCTTTGGAGAGGCAATATTCCTTTCACTTGACTGAATGTTCTTTGGCATGAAGTTGTATCCATATAACTTACCTACATCAGAACAGCCATTTGCACTTTCACAATTAGTGCTTCCATCACTTGCCACTGTCCCAGCAGCTTTATCATGCCTTCTATGGGATATATAATGTCCATTATCTTTGGCATGTACATCTTGTCCATCAGCATAGCTTTCGCCTATGTGACCATAGCCATTTACAACATCTGGAGCTTGATTAACGTTATGGATCAAATGATTATCTTCCAACAAGTTAAATAATCCATCACATACACAATCACTACCTACAGGGCATGAACAGGGTGTGATAACATAACCAAAATCTGCAGCCAAACATGGATCATGGCAGATTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0369300.1 | 7 | 4884220 | A | G |
| Osa07LNT0369300.1 | 7 | 4881205 | T | C |
| Osa07LNT0369300.1 | 7 | 4882418 | T | C |
| Osa07LNT0369300.1 | 7 | 4882809 | C | A |
| Osa07LNT0369300.1 | 7 | 4883075 | T | C |
| Osa07LNT0369300.1 | 7 | 4884964 | C | G |
| Osa07LNT0369300.1 | 7 | 4887092 | A | G |
| Osa07LNT0369300.1 | 7 | 4887289 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0369300.1 | osa-miR5532 | Cleavage | 5.0 | 14.607 | 1 | 22 |
| Osa07LNT0369300.1 | osa-miR5788 | Cleavage | 3.5 | 20.222 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR5788 | Translation | 5.0 | 14.95 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR1319b | Cleavage | 4.5 | 14.708 | 1 | 24 |
| Osa07LNT0369300.1 | osa-miR5825 | Translation | 5.0 | 15.241 | 1 | 24 |
| Osa07LNT0369300.1 | osa-miR166a-5p | Cleavage | 5.0 | 19.393 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR166b-5p | Translation | 5.0 | 15.396 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR166d-5p | Cleavage | 5.0 | 19.393 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR166e-5p | Cleavage | 5.0 | 19.393 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR399e | Translation | 4.5 | 20.136 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR399f | Translation | 4.5 | 20.136 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR399g | Translation | 4.5 | 20.136 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR816 | Cleavage | 3.0 | 22.705 | 1 | 20 |
| Osa07LNT0369300.1 | osa-miR816 | Cleavage | 4.5 | 9.327 | 1 | 20 |
| Osa07LNT0369300.1 | osa-miR1436 | Cleavage | 4.5 | 12.152 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR1441 | Translation | 4.5 | 20.847 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR1441 | Translation | 5.0 | 13.752 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR1442 | Cleavage | 4.0 | 19.18 | 1 | 20 |
| Osa07LNT0369300.1 | osa-miR1850.2 | Translation | 4.0 | 16.068 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR1862a | Cleavage | 3.5 | 4.347 | 1 | 24 |
| Osa07LNT0369300.1 | osa-miR1862b | Cleavage | 3.5 | 4.347 | 1 | 24 |
| Osa07LNT0369300.1 | osa-miR1862c | Cleavage | 3.5 | 4.347 | 1 | 24 |
| Osa07LNT0369300.1 | osa-miR2106 | Cleavage | 5.0 | 16.476 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR2106 | Cleavage | 5.0 | 14.352 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR2122 | Translation | 4.5 | 12.507 | 1 | 22 |
| Osa07LNT0369300.1 | osa-miR2122 | Translation | 4.5 | 18.452 | 1 | 22 |
| Osa07LNT0369300.1 | osa-miR2873a | Translation | 2.5 | 11.467 | 1 | 24 |
| Osa07LNT0369300.1 | osa-miR1862f | Cleavage | 3.0 | 4.347 | 1 | 20 |
| Osa07LNT0369300.1 | osa-miR1862g | Cleavage | 3.0 | 4.347 | 1 | 20 |
| Osa07LNT0369300.1 | osa-miR5487 | Cleavage | 4.5 | 14.84 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR5489 | Translation | 4.0 | 12.832 | 1 | 21 |
| Osa07LNT0369300.1 | osa-miR5500 | Cleavage | 5.0 | 19.049 | 1 | 22 |
| Osa07LNT0369300.1 | osa-miR5508 | Translation | 2.5 | 11.225 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0369300.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0369300.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0369300.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0369300.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0369300.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0369300.1 | 7 | QHd7 | Physiological trait | Flowering | RZ488 | RG477 |
| Osa07LNT0369300.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0369300.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)