© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0369500.1
TTTTCACAGACAGCCATCGCATAGGGGTTTGGGTTTTCTCTCTCGCGGCGCCGTCGACGACCTCATCGCCGGCGCCGCCGCGCACGTGCTCCGGTTGTCCCATCCCTGAGCGGAGGGAGATTCAAGCCGAGGCGGCGTACGGTGGCGGCGCCGACGGCGACCTCGGTGATCCGACGCCCGCGATGGTCGCTTGCCCTAGCCGCCGGGCTGCCGCCGCCGCCGCCGCCGCCGCCTGATACCCCCATCAGCTTACCCGACACGACAGTCCTCCCCCGCATCGCCCGCGGCCATCGCCACCGCCTCCATCTGCTCAGCGCGTCACCTCCACGGCGCCTCCCTTCCCCCGCCGCCGCCGCCTCAGTCCTCCTCCCCTCCGCCGCCGGTGCCGCCGCCAAAATCCCCCACCGCGCGCGCGCCACCTACTCCCTCTCCCTCTCCACCAGGTTCAGGCGAGGTAGTGAGCCCTAATCCTAAGCCCTCATTCCTCTCCCCCACCGCGCCGGCATCAGCTCCACCCCGTTGTCACAAGTCTCCCCCACTGCTGGCATCAGCGTCCTCTCCTCCCCTGGCTCCTCGTGTCCACGCCGCCTGCGGCTGCGCCAAAGTCCAAGGCGTCTAGGCGTCTAGCCCCGCTCGCACTCGCCAGGCCACACACCATCTCCACTCTCCTGAACGCAGCAGCGTCCCCAGCCCCTGCCACTGAGGCGTTGTACTGCATTGCGGACCTCAGGAGCACGGCCGCCACGCAGATGGAAGCCCTCGAAGCGCTGCCGCGGCTATGCCCATCTCCCTCTCCCGCGCATCCAAGAGGTTGCCAGCGTGCAATTCAATGCTAAAGCAGTTAAAAGAGGATCACAGTCATCCATCTCTTTAAGATATGATGTTCATGGGAAAAGTCTGAAGCGGGAAAACCAATCCTGAAGCTACTATGGAGGAAGTCACTGAGGAGAAAACTATATATTTAAGCCACTACACTGCCTGAGCCAGAGATAAAAGCATATGATGTGCTCCGGTACATTCATGCTGTAAAGGACACATTCCCAGACCAGCCCTAGAAGCTTGATGAGTCATCATAATTTTGCTTCATTTCAAGAGCAAGAGGTGGAATTACTCACGTATGTCGGGTACAAAATACATGAACATCCATGTAAAGATCATTTTCAGTGGGTAACAAGCCCAAGTGCCCAACTAGTATATGGAAAAATAAATTATCCAAATCTATGGATCATATGCACGATCAAGGTACACAAAACCTGTCGTTTGGTCTATTCCTCCTATGCTTCGTTGATGTAGTAGTGGCCTTTTTTTTTGCTGGAAGTTTGGTACGATGTCATGCATATCCACATTTTGCAACACTGCTTCTTTTCTTTAGATGAATATATATTGAAAGGTTAGGCACAATTAGATTGTTTAACGCCACTGCAGCCAGCAATAATGATAATATCAAAATGTGACTAGAGAGTTAATTAACTAACTGTTTTCAGCTTCCTGGTAGGTATCATTTAGCTTGCGCTTCGTTGCCTCTAGTCGCAAATCAGCTATGTTGGTGTTGTTTCTCTTCCCTATACCTACCTTGCAGCCTTGTAATATTGTTGCTTGCCTTTCCAACTTCTAAAACCAAATCACACGACTATTAAAGCCTTTCGAAGAATCACAACAAATTAGTGATTAGCACATTAAATATGAAGTTACACTCACATGATTAGGGAGTGGCTTCCTGACAACAACAAAAGGAGGTTGTTCTATTATGGTTGTAGCATGTTGTGTTTGGTTTCATGCCAGTACAATGTTTATTTTTAGTTTCTTCACCAAGTTGACTGCTCGATGTGTATTCATTATGTGTGGATTTATTAGGCTTGGTTGTTATTACACCAGACCTAGAGAACTTGATATGTGATCTTGGCCCTTGTGTTTTTCCTACCTGTAGCTTTGTTTGTCTTAATGTTGGGGCTTGTCTTGTTGGTAAACCTTGGATCTAGGGGATAGTATTTACGTTAGGATATGTTGTTTTGTTCCATAGGTTTGCTTGCCTCATATTGGAGGTTCGTGTTGTCCTGATAAATCTTGTCACTTGTACACTATGTTTTCATCAACATTTGTTATTGGTTGTGCAATCTCCATTTTGTACCCATAACCACAATCATTTTCAGCGTAGTGTATTAGAACTATTACATGATATGCAATCCTATTAATTTCTTGTGTGGCAAGTCATCCTGGGGAAGAAAAAAACATTACCATTGTCTACTCATGCATTCTCCCAGGATCTGCTCAACATAGTTTCGTGAGTATTTTCCTTGCATTTCTGACTACTTGCACTGATTATTGTTACATGTCCGAGGATTCAAAGCTATGCATGAATTCCAACTTCTTACATTTCTTGCTTCCTAGGATGGGATCTCCTTAAGCTTGTTGAGCGTCACATTGCCAGTTCAGTAATATTTGCATTTATTTCTGTAAAAAAAATATTATGGGAAATCTTGGTTTAAAACTTCAGACTCCATTTGAATACTTTGTATGTGGCTTGTTTTTGTTTATGTTCAATTATCTTTAGTATTTTTGTGAGGTGCCATATAACGTCTGGTGGGAAAGATTTCAGATACCCTAGATGTTGGATGTGTCGTGTTGCCTCTGTGGCTTGACAGCATGTAGATGCATCCGAATGGATCAATTTAACAATTTCTATTCAGTTCTACACACTCTTTCCTATGCAGACTTCTGAAACGACCTTGGAGAGCAGCTGTACAATTGAAGATATTAATCGATTGGAACTGGAAGGTTATAGATGTGCAAAACATCGGGTTCTACTTCCTCTGTCCCAAAAAAAGTGAATCTAGAACGGGATGTGACATGTCCTAATACAACGAATCTAAACAATCACATCCAGTATTAGGTTGTTTTTTTTTGAGACGGAGGGAATACATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0369500.1 | 7 | 4983226 | A | G |
| Osa07LNT0369500.1 | 7 | 4983335 | T | C |
| Osa07LNT0369500.1 | 7 | 4984217 | T | C |
| Osa07LNT0369500.1 | 7 | 4984264 | G | A |
| Osa07LNT0369500.1 | 7 | 4984548 | A | G |
| Osa07LNT0369500.1 | 7 | 4984670 | T | C |
| Osa07LNT0369500.1 | 7 | 4984727 | T | C |
| Osa07LNT0369500.1 | 7 | 4986233 | C | T |
| Osa07LNT0369500.1 | 7 | 4986356 | A | G |
| Osa07LNT0369500.1 | 7 | 4987680 | A | G |
| Osa07LNT0369500.1 | 7 | 4989739 | A | T |
| Osa07LNT0369500.1 | 7 | 4990273 | T | C |
| Osa07LNT0369500.1 | 7 | 4990701 | T | C |
| Osa07LNT0369500.1 | 7 | 4991901 | G | A |
| Osa07LNT0369500.1 | 7 | 4994488 | C | T |
| Osa07LNT0369500.1 | 7 | 4994718 | T | G |
| Osa07LNT0369500.1 | 7 | 4995225 | A | G |
| Osa07LNT0369500.1 | 7 | 4995738 | C | T |
| Osa07LNT0369500.1 | 7 | 4995802 | T | C |
| Osa07LNT0369500.1 | 7 | 4996019 | A | G |
| Osa07LNT0369500.1 | 7 | 4997133 | A | C |
| Osa07LNT0369500.1 | 7 | 4997253 | T | C |
| Osa07LNT0369500.1 | 7 | 4992340 | T | A |
| Osa07LNT0369500.1 | 7 | 4990518 | T | G |
| Osa07LNT0369500.1 | 7 | 4992022 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0369500.1 | osa-miR5828 | Translation | 4.5 | 13.196 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR6252 | Cleavage | 3.0 | 23.278 | 1 | 23 |
| Osa07LNT0369500.1 | osa-miR390-3p | Translation | 5.0 | 20.855 | 1 | 20 |
| Osa07LNT0369500.1 | osa-miR810b.2 | Cleavage | 4.0 | 13.655 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR1439 | Cleavage | 3.5 | 16.963 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR1852 | Translation | 5.0 | 13.49 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR1858a | Translation | 3.5 | 17.583 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR1858a | Translation | 5.0 | 14.765 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR1858b | Translation | 3.5 | 17.583 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR1858b | Translation | 5.0 | 14.765 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR1870-3p | Cleavage | 5.0 | 12.1 | 1 | 24 |
| Osa07LNT0369500.1 | osa-miR1874-5p | Cleavage | 5.0 | 13.248 | 1 | 24 |
| Osa07LNT0369500.1 | osa-miR1320-3p | Translation | 4.5 | 17.416 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR2091-5p | Translation | 4.0 | 17.355 | 1 | 21 |
| Osa07LNT0369500.1 | osa-miR5494 | Translation | 4.5 | 15.173 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0369500.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0369500.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0369500.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0369500.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0369500.1 | 7 | QHd7 | Physiological trait | Flowering | RZ488 | RG477 |
| Osa07LNT0369500.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0369500.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0369500.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)