>Osa07LNT0369900.1

GCACGGACAACTTCCTTTCTTAAAAAAAGAAGCGTTGGAACTCAATCTGTTCATACTATTTTTTTGGTACAATAACTGATGGCTCTACACACAGTATGTACAATCTGAAAATTTCGAATAAACATGTAGTGTTGCATTACAAACAAATGGATTTTGATATTCTTCAAATGTGTCAGGCAATTGAGCTAAAGTGAACACTTTAAACTTCTGGAAAATGAAGAGATAAAAAAAGGGAAGGCAAATTATCCAAGAATGCGCTCAACATGCTGCGCCACTCGTTTTGCAAGGCAATCAGCTGCTTCCTCTGAAGATGCCTCTGCATATACACGCACCACATCCTCGGTACCAGATGGCCGCACGAAACATCGCCCATGAGAGTAATTTGATATCTCCCCATCTATCAGTTCCTGCAGCCCATTAGGCTGGCAAACCCTTCTTTCTGCATCTGTTGTAACAATAGAATTTCGATCTTGAACTTTAACCTTCAATTGTCTACTGGGCAGATCAGTGTACAGGTCACACCAATTCTGAAACGACCAGCCCTTGTATTGCAAAACAGCCTCCACCAAAAGCATTCCACTTAAAGCATCTCCAACTGCCTGATTAATTAGCTGACTTGTGGCCAACAATCTCATAGCAGCTTGGTGTTGTGAAGAACCTGCAGCCTTTGAAGAAAACTCACTGGTCAAAGATTCCAGTTGTGAGACAAAATGATCTGAGAATAGCACTGTCCCATGTCCATTGGCTTCAAAGTAGATACCGATATCATATTTTAGGGCTTCCTTGTGAAGATATTTCACTCCAGTTGGAGTGAATACAACTTCGAGACCAATGTTCTTGAGAAAATCTGTTGATGCACCATTTGCATAAGCTGTTTGAATTACACCAAAACGTGTAGGAAGTACTTCATTTCCTTTATTGTCTTTTCCATTGATAATATCTAATTGCTCTCTAATAAACAGCACGAATAGTGATAATATCTTGTCACCATCAACGAGATCAATCCTAGTGTCACTAGAGGATACGATACGGAAATAAACAAGCCGGTCAGCGTCGCCATCAAAACTTGCACACCTGAAACCGACATCTTCAGGACCAAAGCCAAGAGGAACAACTTTCTCCTTCTGAACAAAGTCTGCACCACAACTCTCATTAAGTATCCCTTCTCCCTTCCCTGAATTCCTCACATGAATGTCTAATCCAGAGATTTTTGCCTTTATTTCTTCAAGTTTCAACCCACCAATGCCATTAGCTCCATCCACAATTAGTCTATTGTTTATCACATCAGCTTCTTTATCTTTTGGGACTAACTCCAATAAACACCTATTGCAATATAGTTAAATTATGCAAACAAATAGATGCCACATATTTATTACTTACAGTAGCAGAGAATTAAATTCAGAAGAACCTGAATGAATCAATAACTTGTGAAAAATAATCCGTCTCAGAAGACTTCAGTCCTTTGTTTTTACTTCGGACCATCCAATGCAGCTGTGGAGTGGTGAGGATCCCCATGTCAACTGCTACTGCACCTATTACCGCATTTACTCCCTTCACCGCCACATCAAGGAGGTACTCTCCAGTTGGCCTCGTGTCTCTTGCCAGCAGCACTTGTGCCGAGTGGCTTCCACCAAGTTTAATATCCTCATCTTTTGCAAACTGAAGCACTATCTGGAGGAGGGCGTCGGGGTTGGGGGCATTGGCGAGTGCGTCGGCGAACGGCTCCCAGTCCTGCGACAGCATCCCGCCGTCCGCGTCGACGATCTTGACGCCGTTGTCGCGGACCGGGTTGTGCGAGGCTGTGATGACCACCCCCACGGCGGCGCCGCCCAGCTTGGCCGACCGCAGCGCCGCCACCACCCCGGCGCGGCACACCGCGGGGCCCATGGCGGCCCCCTCCGCGCGGAACCCCGCCGTCCCGTACGAGAACCTCGCGCCGTCGGGCGGCGGCGGGAAGAGGGTGGCCGCCGCGAGCAGCGCGGCGCGCTGGTCGCCTCCCGCCGCGAGCTCGGCCATGGCGCTGCGGGTGGATCGAAACCCTCTCGCCGCCGACGGAGAGGTCTGCGGCGACCTGCT

Explanation	CPC Score
noncoding	-1.09374

Transcript ID	Chromosome	Locus	Ref	Alt
Osa07LNT0369900.1	7	5179379	T	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0369900.1	osa-miR5791	Cleavage	5.0	20.847	1	21
Osa07LNT0369900.1	osa-miR438	Cleavage	5.0	18.566	1	21
Osa07LNT0369900.1	osa-miR3981-5p	Cleavage	5.0	10.038	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0369900.1	7	nan	Physiological trait	Flowering	R2401	R1440
Osa07LNT0369900.1	7	gw7	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0369900.1	7	gp7a	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0369900.1	7	tp7b	Morphological trait	Culm/leaf	R1440	RG128
Osa07LNT0369900.1	7	yd7a	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0369900.1	7	QHd7	Physiological trait	Flowering	RZ488	RG477
Osa07LNT0369900.1	7	qah7	Physiological trait	Flowering	R2401	C1226
Osa07LNT0369900.1	7	nan	Resistance or Tolerance	Insect resistance	RG773	CDO59

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus