>Osa07LNT0370100.2

GGCGCGCCCTGTTCTCCACTGAACCGCCGCCACCCCCCTTTCATATTGTGTAGCGGCAACGCCTCCGCCATCTCTCCTGCGCCATCGCCCCCCATCCTCGAGCTCGACGCGGTGGAGAGGCGCGCCTCCACCTTCCTTGGCTGGCGTCTTCTCTTCATCCTCTCCCTCTCCAAAGCTCCATCGCTGTCCCCTCTCCCACCCCTTTCTCTGCATTCGGCCAGATCCAGCCAATAGAAGCTATGGCCATGGCATCTGGCTCCCCTGAGCTTGGTGGAGTGGAGAGGCCAAGGAGGGGAGGCCTCCCCCAGTATCTTCCTCTCCCAAATCACCATTGCTGCCAGCTCTTCCTCCCCCTTCCGGATCCGGCCAGATCTAGGCTTCATCGAGTTGGGGACTTCCAGATCTGGAGCTCCAGTTCATGGCTACGTGCTGCATCCACCACAACAGCAACGAAGAGGATGTGACGGGGCTCGGGAGTTCCCGTTGATGGCGGCAACATGCTGGAGAATTTCCTGGCATAAAATGCACTTTTTCTTGTTTCTGAATTTCCTGGCCTCCATGTGCACCTTCAACCGAATTTTATTTAGTTGCTATATGCAGGTCACGCAGCAATCCTGCAAATACTTAATGGTTGGTTGGCGAAATGTGCAGCCCACATTAGGAGTGCAACAATGAAGTGCTTCCATAAGCTGCTCAGGATGGAGCTGAAGAAATACATGACAAGAACTAAGAGATAAAACAGAAAATGCAGATGCAGGAAGAGCAACAGATTCTTTAGATTCAAACTGCAGCAAAGAACGGATTACAGTTATAGAAATGTTGGCTTCCCAGTTCCTAATTAAGATGTGAGCATCCCAGTGAACTGTACTCTCAGTGTCTTTGTAGTTTAATCTACATTGGTGGCACTGTCTACCTTATAATCTTACAAACTTCAGTAAGAAAATAATCTTACTACCTGATTTTAGGTTCAAACATTGTGTTTTTCAGAACATCCATGAATAGGAGTGAAGCATCTGTGCTGGTAATGATTGCTATACAAACTTCTTTGCAATCTCAAGACTAAAGTATTTACTTTTCCTTTTTCATTTATGCTCTTTTCAGTGTCATTGTGCCTTTTTTATTGACATTCTAAAAAGTTGCTAAAGTTACATTGTTGACTGCTCTTGACCATATTGAGATAATGAGAAATCAGAGATATAGTAATGTGTGGCTTAATTTGGCTTATATTAGAGCATTGCTACTGGTAAAAGTACCTAGCGAAAAAAATTGCTCATGGTAAACTACCTGCATAATTTCACTAGTACCTTTTGTGATGCAGTAGTTGTTTATGCACTAAATGGTGGCCTCTGTTCCTGAAGATCCAGTCCTATATTTTTGCTAGGTTGATCCAAATATGCTCATGTTCTTATTTCGATCTATATAATTGAGCATTTGGTCTTCTTTCCCATTAATTGTACTATGTTTTGGTTTAGCATGTAATATAGTCCAATCTTGATATTAATTCAGTTTCTAGCTATATTGATCTTCCAGTTTCTTACAAGCTTATCACAATTGCAGGTTTAATTATACATTCAAGCATCAACTTCAGGATCTGTACCATCTATTAATATCATCTTTCTGTTATTGATTGATCAACCAAATAATATGTTCCTAGCTATTGTAACTTTGGTTATTGCTTTAACTGTCATGAACCATGAATTGCTTGTATGCTAATTATTAATTGTAACCTCTTTACTGAAATATATATTTATGTTGGAATGTGTTGTGC

Explanation	CPC Score
noncoding (weak)	-0.876041

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0370100.2	osa-miR5827	Translation	4.0	15.34	1	21
Osa07LNT0370100.2	osa-miR5831	Translation	3.5	10.85	1	24
Osa07LNT0370100.2	osa-miR5832	Translation	4.0	14.756	1	21
Osa07LNT0370100.2	osa-miR5516b	Cleavage	5.0	14.035	1	21
Osa07LNT0370100.2	osa-miR6256	Cleavage	5.0	18.893	1	22
Osa07LNT0370100.2	osa-miR156l-5p	Cleavage	5.0	16.123	1	21
Osa07LNT0370100.2	osa-miR2873a	Cleavage	4.5	15.359	1	24
Osa07LNT0370100.2	osa-miR2873b	Cleavage	3.5	16.398	1	21
Osa07LNT0370100.2	osa-miR5073	Translation	5.0	14.627	1	23
Osa07LNT0370100.2	osa-miR5076	Cleavage	5.0	16.447	1	22
Osa07LNT0370100.2	osa-miR5516a	Cleavage	5.0	14.035	1	21
Osa07LNT0370100.2	osa-miR417	Translation	4.5	17.036	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0370100.2	7	nan	Physiological trait	Flowering	R2401	R1440
Osa07LNT0370100.2	7	gw7	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0370100.2	7	gp7a	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0370100.2	7	yd7a	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0370100.2	7	tp7b	Morphological trait	Culm/leaf	R1440	RG128
Osa07LNT0370100.2	7	qah7	Physiological trait	Flowering	R2401	C1226
Osa07LNT0370100.2	7	QHd7	Physiological trait	Flowering	RZ488	RG477
Osa07LNT0370100.2	7	nan	Resistance or Tolerance	Insect resistance	RG773	CDO59

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus