© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0370200.1
CGAAAGTAACGAATCCTGAATTCATGAATGCGATGTGCCAGGTGACATAAAAAAAACATCTGAAAGAATGATACAAAGCTCGCGACATATACTGGCCATGCAAGTAAGCAACACTTACAGGCCTTAGCTCAGGGAAGAAAATAATTCAAGATTTTTTTTCCTACGTCAAACAGTTATCCACCTGTACTAGCACAACAGAAGGAAATGAATAGAACAAAAGAAATAGACAGAGAAAACTGAGAAATGTGGGAGAAAAAGAAAGAAAGAATGCACTATTGCTTATTATACAATGATGATCTGCCTACAAAAAGTATAGCTTACAAGCTAGGAGCTGCCATGGGATCTGAAAGATGACATGGAATGCGCTGAGACTGAGGCAGTAGGGCTGTTTATCTCCCTGTCTCCATTGGCAGCTCTACCCTTTCCACTAATCATGCTGACAACCTCCTGAGAAACATCCATGAACCAATCGTCACCCGGGAGGACACTGTCAGGGTTCATTCCAGTAGCTGAAAATGCAGCCATTGCTCTATCAATAATATCCAATATGACTTGATGGACGTGCCTAGACAAGAATCGACCTTGTCCAAAGATAATTACAAATTGCATATCCAGGTAGAACTGCAGATAAGGGATGAAAAATGAAAATCACAGCTGATAGCATGAAAGGAGAAGAAGAAGAAAGGAGCTTTACTTGCTGAAGGCCAAGGGGACCCAAAGGCTTCGGTCCCTGTTCAATCTCTTCCCAGAAGGCTTGATCCTCTGAGAGCCATAGTATGACTGTCTCAGTGAGTCGCATCATTAGCAGAGTAGCAAATCTTTCTCTGCCGACAAACATATCTGCCGCAATACTGGCCATCCTATTTAGCTTTGCATACAGCTCCTGGAAAATAAGAGATGGGGCCCATTCTGGCTCTTCAACAGTATTGTCCATGCTAATATACATGTCTGCACTGAGATGGGTCTCACCTTCATCTGTAAATATAAGTTCAAGAGCATGCTGCCTGCAGAAACTATCCCTTAATCTGTCCACCATGCGTTGTAATTTCCGTTTCCATTCACGTTGCTCAGGCATACGGTTCTGTTTATCTGAGCCTCTTTTACGCAGATCATCCATACTAGAATGGTTCATTGATGATAGCTTCATAGCTGCTCTAGGTAGCAACTCCTCAGCTAGCAAAGACGCATTGGCTAATAAAGCCAGTTGCTGTTCTTCAGACTCTGCCATTCTAACAATCTTATTTCCTAAACCATCTATGTTAGCTTCATCTTCCATTGACCCAGGTAAAGCACTTATGAGCAAATTGACATATGAATTGAAAATTTTAGTTATGTCATCCATTGTAGAACCACCTAATTGCAAGCTAAGCAGCGGCGCAACATCTTCAAAGAACTCCTGAACCATCGAGTTAAAACGATGAGCACTGTTGGAGAGCTTTGGCTGAAGAGCCAAATTAGCAGCAGATGATCTAGCTAAAGGACGAATGCCAGTTGGGGGATATGTGAGAATCCAGTCATCAGCTGCAGCTAGTGCAGCGGTACTCTCTTCAATTCTTCTGATGTTTGAATATAATGCTTGCTCTAGACTGGGCCTGAATTGCCTCAGAAGAACAGCTGCAACAGACAGACCACGAGCTTCCAACAAGGAGCAATGACCAAGTGATATCTGAACACATTCGGCAGCTGCTCTCAAACCTCCAGCAGCTGCACAAGAGGACAACACATGCCTCTTTACCAAGAGTGCAAAGGACATAACCTGCTTCGTAGCCCATGTAACCAGTTCAGATGCATAACATGACTCATCACCAAAAACTTCTACAGAGTCACTGAGTGCCTGAGCTACCACTGAAAAGACTTGCTGAGCAAGTGCTGCAGTGTACGCCCCACCATACGAAGTGCTAGATGGATGTATAGTTTGCATATTACATTGAAGCCTTTGATTATGTGCATTGAGTAGCAGGCTGTGAGCTCGAGGGCCATCACCAAGCCTTTTGAGAGCAGAAGCTGCAGCACGAAGCTCAATGCCACGAGTAGAAGACTGACAAGCAGCTTCAGCAAGCTGATCTGCCAACTTCTGACGATTATCAGAAACTGCCCTTCTCAAAGCTGCAATTTCAGTTGCGGTTAGAGTCTGTTTAAGTTTTGCATCAGAAGCAAGTCGTTCCGCTTCATCTAGTGCATCAAGTGCTTCATCCACTCTTCTCTCAGCTAGCAAAACATCAAGCATGTCAGGGAAATCTGCAGACCATTTTTGTATTTCTGAAGGTTCCTGGTCTTCAACATTGGATATATCGTCTTCTGCAGAACCTTCAGTGTTTGAAGTCAAGGAATCTATTTGAACTCCTTCAGAAAGACCATGGATTAAAGCTGCTTGTGTATTCAGTAGATTTCTTATTGATAGCAGTTCCCCTTCAAGATCTGATATCTCCTTTGATGTTCTGATAAATGCAGCATAATTTGCATATACACTTCTGCGCATCTCTTCAGCTGAAGCCTTCTTTAGATCTTGCAGGTAAGAACATAAATGCCTTATCTCCTTCTCGTTCATCGTCTGGCACTTGGACTGCACGTACGCGTCGGGATCGAAGTTGTCGGTCTTGAAGATCTTGAGCTTGTCGGCGAGCTGCACCCCGCCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0370200.1 | 7 | 5425993 | G | C |
| Osa07LNT0370200.1 | 7 | 5419826 | C | A |
| Osa07LNT0370200.1 | 7 | 5419870 | G | C |
| Osa07LNT0370200.1 | 7 | 5420139 | A | G |
| Osa07LNT0370200.1 | 7 | 5420173 | G | A |
| Osa07LNT0370200.1 | 7 | 5420457 | A | G |
| Osa07LNT0370200.1 | 7 | 5420539 | G | A |
| Osa07LNT0370200.1 | 7 | 5420584 | C | T |
| Osa07LNT0370200.1 | 7 | 5421030 | A | C |
| Osa07LNT0370200.1 | 7 | 5421090 | A | G |
| Osa07LNT0370200.1 | 7 | 5421968 | A | G |
| Osa07LNT0370200.1 | 7 | 5422102 | C | G |
| Osa07LNT0370200.1 | 7 | 5423149 | G | A |
| Osa07LNT0370200.1 | 7 | 5423673 | A | G |
| Osa07LNT0370200.1 | 7 | 5425875 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0370200.1 | osa-miR319a-3p | Translation | 5.0 | 18.764 | 1 | 21 |
| Osa07LNT0370200.1 | osa-miR160f-3p | Translation | 4.5 | 19.841 | 1 | 21 |
| Osa07LNT0370200.1 | osa-miR1874-3p | Cleavage | 3.5 | 12.381 | 1 | 24 |
| Osa07LNT0370200.1 | osa-miR5150-3p | Cleavage | 5.0 | 19.511 | 1 | 24 |
| Osa07LNT0370200.1 | osa-miR2275d | Cleavage | 5.0 | 16.219 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0370200.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0370200.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0370200.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0370200.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0370200.1 | 7 | QHd7 | Physiological trait | Flowering | RZ488 | RG477 |
| Osa07LNT0370200.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0370200.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0370200.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)