© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0034100.1
GCCTTTTGTAAGGATAAAAATGATTAGTTTTATTTTACAAGTTATGTTTCCAACAAATGAAGTATAACTCTGATTACATTTATTTTAGCCAGACTGGCCCAAGAGTAGGCTAAGCAAATTCATTAAGATTATGAGATGGTGTTACAAACTAAGCGTCCACACGAAGTTGTCGAAACCGGTTACAAAGAGTGGGAGAGAAAAAACTGCAAAAGGAATAATGCCAATCGTTTTTCGCCTACCATGAAGCCTGCCTCCCTCCAGATTGTGATTTCTTTGATGTCACCAAAGAGCTGCACAACCATACAACTTGCTGAGACAATCTCTGAAGAAGAGTGTACCGAAAACTTTTCTGAGATAATCTCTGAAGCTTCTCCTTGAAGCCATCCGCCAATCAGCCAAGTCTACATTGAGGTCACTGGGAAGCGGAAAGCCAACATTCACCTAGCTCCTGAGCAATCTCCAAATCCTCTTTTCTGTAGATTGTCAGCCATGAGGCATCTGCCCTTTAGCGCAAGCCACATGAAAATCTTTACTCTGGACAGCAACAGGGATTGCCAAAGCAGCTTGCCACAGCTCCATATCATTTTCATAAGGAAGAAAACATGGAAAACTTCAGACATCGTAGTTTACGTCTGTTGTTTTAGAGCCATTAGACAATCAGAATATGAAGGCATAAAAATACATAAAACGGCATGTACTTCGGAGTATACTCTTATGAAGCTATATAAATTAAAGGATGCGACCACACAAATGAAAATTGAAACCGGATCTAGATCAAAGCTTATCGCAATGCAGTTAATAAGCTGAACATATAATTTACTTCAATATTCCAGCATTTACTATACAAATAGCTCCTAAATACCGTGCGCCAAACAGTGAAATGCCATGGTGAAACATGATAGGATTTTACCAAAATCTCCAGTTGGCCACAATGTCAACCTTGGATTTATGCATATCCTTGAAGCGAAGGGGCACATCGCAGTGATCAAGAAGGTAGTCGGCCATCATTTCATTCCTACTTGTAAATGTAAGATGTGATGACAGGAAATATAGCCAAGAAAGCAAGAAAATCAACTTCTAAAGTGAAATGGAGAATCCAGTTTAATAACCTGTGTAATTTGTACAAAAGACACATGATTCCCCACTATGGGAGAGATATTACCAGTCCAGGAAATTAATTGAATGGATTAGCATTCAGAGGGAATCGTGTGATTGATTGGCAGGGATAGTCAACATTCAGTGAGGAATTAAACTGTAAGATGGACCTCGGCTCCGGCGGCGGATGGAGAAGATAGTGGCTCCGGCGAGGATGCGGCGGCGCGGTGGCAGTACACAGGAGCGAGGAGGAGCGAGCGAGCGAGGAGGAGCGAAGTCACATTCCAGCAATTTTTAACTGATGGCAATACCTCGAACCTCCTCATCTCAGCAAGAAACATATCAAGAGATGGCTTGCCAGTCCTCACGTCTTGTTGCAACAGCCATTGGTATTCTATCAATTTCATTCGAAAAAAAAAATTCCGGAGGGGAAGATATGTGGTGCATTTAGGGAACGGAAAGAATCCCCTACGATGGTGGATCAGACAGTGGCCTCGTTGGCAGAAGAGTCCAGATCCTCTTACAGAGCAGTGGAGAAGTCCGTGGACTCTCTGTTGCTGAGGCAACTGGCCGGATCTGCTGGGCGCCTTAGCGAGGGACCGGCCATTACGTCCGGCTTCGGGGAAAGAGCTCCATGCGTGAGGTGCCTTGATGTGGTGGCATCGGCGGGGGAAGGCGACGACGCAGGGCTCGACTGTGAAGGGGGATTGGAGAGCGAGCGTGACAGAGGGAGGGTTGCCATCCGCCTCTCCCTCTTCACTCTCCCCACCAGTCATCTCCCGCGCGACGACGCCTCCTCGCCGCTGGGATGGGGCCGTCAGGATGGGGGAGTCCGGTATGAGGGATGGCTGGATCTGTGATGGCGCGGTGGACAGCCAGCCGGGACCGCGCGACGACGACGACGACATGGAGCCATCGGCGACGCGGTGGAGGAGGAGGCGGGATGGGGGGGATACTGGAGGGGTCGGGACCGTGCGATGACGACGGCGGCCTGGAGCGAGGAAGCGTCGGGAGGCGCAGCGCGCATCTGAGCAGCGCGAGGAGGCGCGGCGGCGGAGTCATCGCGCGGGGAGAGCGTGGGGGCGTAGATAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0034100.1 | 1 | 29206449 | A | G |
| Osa01LNT0034100.1 | 1 | 29206952 | T | C |
| Osa01LNT0034100.1 | 1 | 29206968 | A | C |
| Osa01LNT0034100.1 | 1 | 29207489 | A | G |
| Osa01LNT0034100.1 | 1 | 29207724 | A | T |
| Osa01LNT0034100.1 | 1 | 29207725 | T | A |
| Osa01LNT0034100.1 | 1 | 29207996 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0034100.1 | osa-miR810a | Translation | 5.0 | 17.086 | 1 | 21 |
| Osa01LNT0034100.1 | osa-miR1846d-5p | Translation | 4.5 | 23.766 | 1 | 22 |
| Osa01LNT0034100.1 | osa-miR2867-3p | Translation | 4.0 | 15.187 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0034100.1 | 1 | nan | Morphological trait | Root | RM3475 | RM3494 |
| Osa01LNT0034100.1 | 1 | qCC-1 | Physiological trait | Source activity | C122 | R1012 |
| Osa01LNT0034100.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0034100.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0034100.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0034100.1 | 1 | An10 | Morphological trait | Panicle/flower | nan | nan |
| Osa01LNT0034100.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0034100.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0034100.1 | 1 | qHUS-1-2 | Others | Others | RM246 | RG101 |
| Osa01LNT0034100.1 | 1 | qLRC-1 | Resistance or Tolerance | Drought tolerance | RM237 | RM302 |
| Osa01LNT0034100.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)