© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0370500.1
ATGCGTTCACGAGGGTTGTTCCTTTCACTGGGCAAAAGGATTTGTATCCACATCCTTCTGCCAAAATATTATTCGTTATTTACAAAGATTGCACTAGAGCAATGACACACTATTGCGACATCAGATGGGCCTATCATCCCACAGCAAAACACAGCACCTCACTACAGCTGAGATTTGGTATGTTCTGGGTATGTGCTCCAGTAGCAGCTTCAGCTGCAACAACTCGGTGCTCGGCTCGGATCCAAATTCAGCGATGATGCCACCCAAATATCAGCAGGTTGGAGACAGCCATGTCGGTAAGAACAGTGACCGGGTTGAATGGATTGTTGAACGCCTCAGTTGAGTGCGTAATGCACCCTCTCTAATGCTCGCATGACCTGGAAAACCGAGATATCGTGTTGCCTCTTCTTTCCAGGAGAAACAATATTGAGAACATCGTGCTGTTGTTCGCTGGTGAGCTCCAGGAACTGCACAAGCATGTCGCCATCCAGAATGGGCGGTACTCCCGACGGGATACCACGGCGACGAAACTCTGCATGATCATTTCCTAAGAGTGGAGCAGTCAATGGGTGAACCGAAAGTCTTTCTTGGACATCTTGCAACATTTGATGCTCCTCACTTGTGAGTGGAATCATAACAAAGATACTCCCCAGCAGAGTGCTTGCGACGACACAGTTGTATACCGACTCCAACACTGGTTCTGTCAAATCATCAATTGGAAGCCAATGCTTAAATGCAACCTTCTGGATGCTCATAGCTGTTTCACCCATGTAAAATGAACAATGCACCGCTAGGTTCTTCTCTGGACTTTCGGATACTTCTAATCTTGGGCAAGACAGTACAGATATGCTCCCTCGTCGATCTGATACAACAGCAGTTTCACAGCTCAAAAGGGCAACATCACCCACTAGCCGTTGGGCAGGATCAGAATAGATCAGTTCCAACTTCCTAAGATTCTCATGATAAGAATAGAAGAGAACACCATCGCGGCAATCACCCACTGCAATCCGTGATGCATACGTCTTCAAACAGGTTATTGTAAATCGTGTCCTACTCGTAGTATACTTTTTTATCCGATGGGGACTTTCATTTAAAAATCCAAATACAAAAAGCACATTTCCAGCTGCTGCCAACACATATCTATCTAGATATGGATGTACAGCAAGAACAGCGCCATTGAATGTATGTTGGACTAGTGATCTCAAATGGCCTGCCATGAGTTCAGGTTGAATTTGATTGCAGCAAACTTCATCAGGACTGCTGCACATGCTGTTACTAGACAGCTCCTCTGCTGCATATCCAACAAATTCCGGGAATGGAGAACCAGCATGAGATGAATTCAAATTAGAAGCTGCAGTAAACGAACCGCTCTCACGAGGACTTTCAATAGTCTCCAAGCTTAAAAGAATTAGACGACCCTTGATACTTTCTGCTTCACCGTTTGGCATCATTGGTCGGCCATTGGACTTACTAGTTCCAACGATTAATACTTGATCATTCCCTATCTTTGCAATTTGCATGCATTTTGCTGTTTCACCAGGTTCGCACTTGAATCTGGAAAGCAATGCCCCATTACTTGGATCTATTTGAACAATATCTGAAGAACAGGATACACTGGTTAACCCAGTTCTCAGCACCAACAGTGTTCTACTATCACTGTGGTATAACACTTTCCTTGGAGTCCCTCCAATCGAAAACTTCTGTGCATTTAGTCTTTTGCCATGAACCATTTCAACCAAATGCAAACAGTTCTCCGAAACAAACAGCAGACCACTGGGGCAATCAGTAGAAGACACTGGTGTCACATGGGAAGCAGGCAGAAATGAGATGGATGAATATGCCAAGCTGTGTCTAGCAGATTGCAATAGCCAAGGCCTATCACCGAGAACAATAATGTCAGCATTGGCTCTGTCATGCAACGGTACCAAAACTACAGGAGTGATTCCAATACGCCGTACAGCAATCAACATAAGGGATGTATCATCACAAGGGGTAGAGGACTCCTTGTAAAAGGAACCAGGGAAACAATGCCCTTTGCTTGTTTGTGACTCAAACCTCAGTAGCATTCCATTCCTTAGTCCTGCAAGAATGTAGAACCTTGCAGCTGCTACAAACCTAACATTTTCAGGTATACAACCACTGATAGGAGTGCCGAGCGCGTTGTTTACTGATATATGCCCAACAGCAAGTTGCTGAAATGCTTCTCCAGGTTCCAACGAAATGATATGCACAGAAGGTTCGTGAGTTCCAATTACAGCAAACTTGCGAATATTAGCTGCAAAATCTTTCCGAAAATCACCACTCGTTGCACAACTAGAAGATGAATTATCAAGTCTCCAGTCCTCTTGTGGAATAGATATGCAAGATACTTCATAATGCAACTGGACATGTTGTATCTCATACAGCTCATACTGAAACGAAGATAATGATCTGACCCCAAGTATGTAAAGGCAACAAGGATTCGATGTAGCAACAACAACAACATTATGTCCAACAGCACCAACACTGATAGTGACATCAGGATACCAGTCAGCACAAACAGGAGACGGGAGCAAAGTTCCCTCAGGGTGAGCACATGCTGTAGGTAAACAAAGCTTTACACATTTGCTGTGAATTTGCACAAGCAAACCATCAGCTACTAAACCACATGCCAGAGTGCAAACATCAGTCTGAAATCCTACAGCATCACAGATGTCATTAAAACTGAGTCCTACTGATAGTATTCTGGTTTCCTCAACGAATGACAATACAAGAAAAGAGTGATAAGCATCAGTTCTCTTCATTCTCAAGGTCCACAAACCAGTAACACCATGATAAATAGGATCTGTCCTCAGAAGTTTCTCCACATTGACACCATTACGTATTACTCGCAAGGACCCCTCAGGGCACATTCCACAACATGCAAACATCTGATCCTGCTTCTCACCATGGTGGTCAGCAATTGCTAGATCCAATATTGGCGCTACATTCTGAATTGCACTTTTATGCACCAATCTATTATTTTCAAGTTGGAGGATCATCCCATCTCCCATCTCTACAAATCCAACTACCATTCCTTTGTCCATCCACAAAAGAGGTTTGCAAGGCAAACCTCTATGGACACACTCAGGCAATACCTTCACTCCTTCCATATCCAAACTAAACTCTAGAAGATGAAATTCTCCATCATCCAAGCAAAAGATCAGCCTTGGATGTCCTTGCATGGCATTTGGCTCCCAGTTCCATGAGCAAACAATCCTTGATTTCACTACAGCTTTGTTATCAGTACCGTCAATGTCCATGTAACTGTCATCCCTCATCATGTTATTTCCAGAGTCTCTCAGTTCCAGCAAAGCACAAGCCGCCACATCATCATCGACATCTAATCCCCTACAGGAATCTTCAACGGAGACATGATCTCCAATTAGACTAGTTGACAAGCTTATTCTATGGATACAACTGATGTCCTTTGGGTTCCTCAGATCCATCAACAGAACATCACCAGCACGAAACATAAGTGCAAAGCCATACAGTTGGGGAATTTCTGAGATTTCAAGTGCCAAAGGTCCAGCTTCTAAATAAGTAGATATGCGGTCAATAGTACGTTTATGGGAATCTAGCCCATAGAGTGCCAAGTCATTTACATCAGAGCCCCTGTTAACTATCATTGCAACTACAGGATAATATTCTTCATCCAGGCATGTTGATATGAAGCACATACTCCAAACTGTACCATGGATACTGCTGGTATTATATGCAGTACTGATGATTTTAGCATCCTCTTCAATTTCTCCATTAGGAGCATGAAGTTTGTGATCCACTGAAACACGTACAAATGCAAACTCATCCTCATATGCACTGACAGCAACAAACCTAGATTCTCGGTCTATAGCTAAAATTCTCCCGAGCCGATGCCTCAAATTTCCTGGTTTCGATAGTTCAATATTTGCAATTGCAAAGAACCTATGCATCTCAGAACAAAAGTAAAGAAGAGATAGCTTTCCAGAATCTGAAAGTATAACCAGAATTTCTTTCCCTTCTATCTTCGGCATTAAACCAAAGTGTGTACAGCGCCAGTTTAAGACACCAACATCTTTTATAATACCAAATGTGGTTTGTTCACAGATTGATTGTAAAACACCATCTTCACCAATAACAACCAATTCCAGTGAATTTTCCTTGCAGAGAACGACGTCGACGCAGTCGGGGGAGCGGAAGCAGCCCTGGGCGACGTGGAGCACGGCGCTCCCGCGGAGCACGCGCTTGGCGAGGTAGCGGGTGGCGACGGCTGATGAGGACGCGGATGCCGATGCGGTGGCGGCGGCGGCGGCGGACGATGTGGAGGGGCCCGAGGAGGAGGACGACGACGACGCGGCGCCGGCCTCGCCCCCTCCCCCGCCCCCGCCGGCGGTGGGGGACTCCATGCGCTCGCGCTGCCCCCGCCTCTGGAAGCTTCGCCGGCGACGAGGGAGAGAGAGAGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0370500.1 | 7 | 5580321 | T | G |
| Osa07LNT0370500.1 | 7 | 5568864 | T | C |
| Osa07LNT0370500.1 | 7 | 5569546 | A | G |
| Osa07LNT0370500.1 | 7 | 5569892 | A | G |
| Osa07LNT0370500.1 | 7 | 5570484 | C | T |
| Osa07LNT0370500.1 | 7 | 5570560 | T | C |
| Osa07LNT0370500.1 | 7 | 5570636 | G | A |
| Osa07LNT0370500.1 | 7 | 5568443 | A | T |
| Osa07LNT0370500.1 | 7 | 5572547 | C | T |
| Osa07LNT0370500.1 | 7 | 5572671 | A | G |
| Osa07LNT0370500.1 | 7 | 5574638 | G | A |
| Osa07LNT0370500.1 | 7 | 5576399 | A | C |
| Osa07LNT0370500.1 | 7 | 5576727 | C | T |
| Osa07LNT0370500.1 | 7 | 5577388 | C | T |
| Osa07LNT0370500.1 | 7 | 5578633 | G | A |
| Osa07LNT0370500.1 | 7 | 5579188 | T | C |
| Osa07LNT0370500.1 | 7 | 5568303 | T | C |
| Osa07LNT0370500.1 | 7 | 5572821 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0370500.1 | osa-miR5821 | Translation | 4.0 | 16.769 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR5824 | Translation | 5.0 | 17.771 | 1 | 24 |
| Osa07LNT0370500.1 | osa-miR5827 | Cleavage | 4.0 | 19.104 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR416 | Cleavage | 5.0 | 19.442 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR444a-3p.1 | Translation | 5.0 | 22.29 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR444b.1 | Translation | 3.5 | 22.006 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR444b.1 | Cleavage | 4.0 | 14.689 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR444c.1 | Translation | 3.5 | 22.006 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR444c.1 | Cleavage | 4.0 | 14.689 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR444d.1 | Translation | 5.0 | 22.29 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR2099-3p | Cleavage | 3.5 | 13.38 | 1 | 20 |
| Osa07LNT0370500.1 | osa-miR2105 | Cleavage | 5.0 | 16.552 | 1 | 20 |
| Osa07LNT0370500.1 | osa-miR2864.2 | Translation | 4.0 | 12.456 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR3979-5p | Cleavage | 4.5 | 21.387 | 1 | 20 |
| Osa07LNT0370500.1 | osa-miR2873b | Cleavage | 4.5 | 14.536 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR5073 | Translation | 4.5 | 13.736 | 1 | 23 |
| Osa07LNT0370500.1 | osa-miR5147 | Cleavage | 4.0 | 21.93 | 1 | 19 |
| Osa07LNT0370500.1 | osa-miR5151 | Cleavage | 3.5 | 18.844 | 1 | 22 |
| Osa07LNT0370500.1 | osa-miR5337a | Translation | 4.5 | 17.504 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR5505 | Cleavage | 4.5 | 12.969 | 1 | 22 |
| Osa07LNT0370500.1 | osa-miR5505 | Cleavage | 5.0 | 15.597 | 1 | 22 |
| Osa07LNT0370500.1 | osa-miR5521 | Translation | 4.5 | 17.054 | 1 | 21 |
| Osa07LNT0370500.1 | osa-miR5521 | Cleavage | 5.0 | 20.524 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0370500.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0370500.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0370500.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0370500.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0370500.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0370500.1 | 7 | QHd7 | Physiological trait | Flowering | RZ488 | RG477 |
| Osa07LNT0370500.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0370500.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0370500.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0370500.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)