© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0371400.1
GCTGGAGCCTGGAGACGCAAAATATGATCATGCAAACGTTCAGAATTTTATATACTGTTTGAAGGTATGCAGTTCGTCTCCACCCTTGCCTTCTCCCCTTGATAATCAAAATTCCCCATTTCCCCTATGAAGCACATCTTGACCTTCTCCCCTTGAATCATCAAAATGAGATGCAGTTTCCGGGCTACTTTTCAGAGTTTACTTAATTATATGCTCAATTACATTGTGTTCATATGTGATGAATTAGTCGTTCTGTAGAGACAAATGGGAAGGCGGGGTGAGCTGCAAAAGAGCGGATGAGAAACGCTTTGCATTTTTCTTTCATATTCCATTTGTCATCCACACTGTCTATGTACCCTCAAAGAGAATATATATGCACTGTATTAGCTACCTACAAGCTATATCATCCACAAGTGTCAACCTCATTCTTGAAGCACCAAAACAACGCTTCAGTAGATCTTAACAAAGTACAAACTCATTATCTACCTGGAGGCTGGAGGGAATCTCCCTTGTGCCACTGGGAATATGCCCTTGAATTTTGTTTCTCCCATTTATGGTACTATTTCCAAATCTTATGCCAAAACATGCTGTGGACATTGGCCATGCTGTACTGAGGAACGCAATGATGATTTATGCCCCCATCCTGTATTAGACAAACTTAACGACATACTCTGTTCTTCACTCATGATGGTGGTAGCTCATCAGGGGCACTGTTTTTCACAACTTCACCCGTAACTGACCACGGAGTGGAAACAGCGCCAGGACACCTTGTGCATGCTCACTCCTGTTATGCACTCGTGACAGCAATGAGGAGGCACCAAGCCCATAGTATAGGCTTGTGGACCAGAACTGCAACAGCCACACTGGGATGTACGCAGTGGAGGTGAGGCTGCACAGGCATTACCCAACCTACATGGAGGTGGCAAGAAATGCAAAGTTTTCCCAGAATGATGCATATCAATTATCAAAGCAGTGGCTCGACCACCCCAGATGAGCATATCAGAGGTGCGGTTACGCACTCGTTGCCCATCCTATGTTGAGGTGGCAAGAAATGCAAACTTTTGCCAGATTGATGGATATCAAACCTTAACCAGCGACACGATCACCCAGATGAGCATTAGAGGTGGAGAGATGCAATCCTCATACTGCCCTGTTCTAGGTGCTTCCCTTTGGATGTGTGAATGCCACCTTGCCATCCATAAATTTCTTTTTGTCAGCACATATGTGTTACCACTGAAGGAGGCAGGCGTTTCTGTGTTGGAAGACCTGTGTTTAAAGCCGAGGTATTTCCTGCTTAACATCAGAGAGATGTAAACATCGAGAGCTCACGTTTGCTTGTCTCTCAATGAACTTATTTTTTCTTGCATAGTAGCAGCAAAATCCATGCCATTTTCTCTCCAGATATAGGGAAGGACATTTTGAAACATATATAGTGTTGGATGAACTCCAGAGTCCTCCATCCACTGCAAAACCTCAATATACTTTCTCCATTTCCCAACAACTAGGAGATTTCTAAGAACAACCGCATAAGTAGAAAGACCCACAGTAGAACATGAAGTCACCATCTTGTAAAACAGCTTCATCATGTTCTCTGTCTTCCCACATTTTCCAAGAAAATTTAAAACATGGTTTAGTGTTCCAACAGAAATGGATGAGAGCGAAGAATCCAAATATTCAATCATCTCACTTGCTGTTTTCCAGTCACGTATCATGGTGCATGAAGCTATTATCTCAAAATAAGATTTTTGGTTCAACGGGATGGATTTTTTCTTCATGAATTCCATCAATTGAAGGACTCTTTCAGGTTCGCCACCCTTATTGAATGCTTCCATGAGAGATGAGCATATAATGGCATCTGGTGGAATACCATTTACTTCCATCTCTTTGAACAGGTCCCAAGCTCTCTTCCAACCACCACCAGCATTATAGGCTTGGATCAATGTAGTATATGTCAAAACATCAGGAAAACAGCCTGATTTTTTCATAGAACTGAAAGTAGATTCTGCTTCAGATAGTTTGCCCTGTTTGATATACGAATAAATCAATGAAGAGTAAACCTCCTTGGTTGAAGAAACCTTGGAGTCCACCATGTCCTCAAAAAATCTCAAAGATTCCGTATACTTTCCTAATTTACTAGATCCACTGATGAGTATATTGTAGGTTACAGCATCTGGTTTCACATTGCTCTCCCTCATTGATGTATACAACTCCAAAGCTTTCTCATAATCTCCAAAACTTAAATAACTTTTAATGCCGGAGTTGTAAGCAACTGTATTTAGATCAATACCTCGGGACCTAGCTGCTTCAAGAATTGTCTCAATTCTTGTTATCTGCCTGCAGCGACCGCAGGCAGCCAACAGAGTACTTATGGAAACAACATCTGGCTGAATGCCATCTTTCTCCATTTCATGCAGCAAGCCAACAGCTTCCTTCAACATTCCCGCAGACCCATAGGCATCAATAAGTGCATTGTAACTGACTTTATTTGGTTTGCATGAGTTCTTCTTCATCTTGTTAAAGACCTCCCTAGCCTTCTCAGGCTGTGCAGATCTCGTGAGGCATATGCACCCAAAAGCGAATTATATGCTACAATATTAGGCTTCACTCCTTCAGCAACCATCAAATCAAAGATTGCTTTGCAATTTTCAACTTGCCCATAAATACAATAAGAATGCATGATGCTAGTATATGTAACAACATCTGGAGGACATTTGGTTCTTCTCTCCCTCATTGAGTTAAACAATTCAATAGCTTCCCCACACTGTCCAATCTTTACAAGGCAATGGATGATAATATTTAACGTGAAAGTATCAGAGGTGACATTTGCTCCTTTCATTATTTCAAAATAAGATATTGCTTTTGAGTACTGAGCTCCATTCTTGAGAGCAGACAAGACAATGTTGTGTGTAACCAAATCTGGTCCCACACCATTTTCTGTCATTTTCTTACACAGTTCTAAAGCTTTTTTCCAGTTGCCAGCAGCCCCACATGCATTTATCACATTATTATACGTAGTCCGGGTAGGAGGTATAGCAGCACGAAGCATATCTTCCATAATGTTGATGGCCCAACGCCATTGACCAGCTCGAGAATGAGCATGGATGAGGGAATTGTATATATCAGCATCAGGTTTACACCGCCATTCCTGCATCTCAAAGAACAGGCCACGTGCCTGATCAACCTGGTTATGCCTCGCATATAGTCGTATCATCATGCCATAAATGTCGTTACGAGCACAGTAGTTATCCTGATTTTTCATCCAGCAGAACACATGGACAGCATGCTGTAAATTCCCAGAAATTGTGATCTCGCGGATGAGGAGAGGGAAGTTGCGGCGGGCGAAGCGGCCGGCCCAGCAGTTGAGCACGGCGTCGACGGCGCGGGCCTCGGCGCGCGGGAGCGCGAGCACGCGCGCGGCGGCCTCCGACACCTTCCAGTCCCGCTGCCACCGGCTCCCCTCCACGCGCAGGCGGTGGCGCGCGGGGAGCGAAGCGGCGCCCACGCCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0371400.1 | 7 | 6223132 | C | G |
| Osa07LNT0371400.1 | 7 | 6224724 | A | G |
| Osa07LNT0371400.1 | 7 | 6225178 | A | T |
| Osa07LNT0371400.1 | 7 | 6225454 | A | T |
| Osa07LNT0371400.1 | 7 | 6226107 | G | A |
| Osa07LNT0371400.1 | 7 | 6226436 | G | A |
| Osa07LNT0371400.1 | 7 | 6226876 | G | A |
| Osa07LNT0371400.1 | 7 | 6229434 | A | G |
| Osa07LNT0371400.1 | 7 | 6230668 | G | C |
| Osa07LNT0371400.1 | 7 | 6223249 | A | G |
| Osa07LNT0371400.1 | 7 | 6223372 | G | A |
| Osa07LNT0371400.1 | 7 | 6223449 | T | C |
| Osa07LNT0371400.1 | 7 | 6223790 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa07LNT0371400.1 | DTM_#DNAt_MULE_japo_Os0089 | Chr7 | - | 6223214 | 6223957 | 743 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0371400.1 | osa-miR5532 | Translation | 4.5 | 21.058 | 1 | 22 |
| Osa07LNT0371400.1 | osa-miR5532 | Cleavage | 4.5 | 19.87 | 1 | 22 |
| Osa07LNT0371400.1 | osa-miR5817 | Cleavage | 2.5 | 21.058 | 1 | 24 |
| Osa07LNT0371400.1 | osa-miR5828 | Cleavage | 4.0 | 17.243 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR156a | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156b-5p | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156c-5p | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156d | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156e | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156f-5p | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156g-5p | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156h-5p | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156i | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR156j-5p | Translation | 5.0 | 23.281 | 1 | 20 |
| Osa07LNT0371400.1 | osa-miR167c-3p | Translation | 5.0 | 19.833 | 1 | 23 |
| Osa07LNT0371400.1 | osa-miR1429-5p | Translation | 4.0 | 13.159 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR444b.2 | Translation | 4.5 | 20.859 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR444c.2 | Translation | 4.5 | 20.859 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR1857-5p | Cleavage | 5.0 | 14.076 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR1428b | Translation | 5.0 | 21.952 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR1428c | Translation | 5.0 | 21.952 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR1428d | Translation | 5.0 | 21.952 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR2095-5p | Cleavage | 3.5 | 17.748 | 1 | 22 |
| Osa07LNT0371400.1 | osa-miR5148a | Translation | 4.5 | 15.06 | 1 | 24 |
| Osa07LNT0371400.1 | osa-miR5148a | Translation | 4.5 | 12.256 | 1 | 24 |
| Osa07LNT0371400.1 | osa-miR5148b | Translation | 4.5 | 15.06 | 1 | 24 |
| Osa07LNT0371400.1 | osa-miR5148b | Translation | 4.5 | 12.256 | 1 | 24 |
| Osa07LNT0371400.1 | osa-miR5148c | Translation | 4.5 | 15.06 | 1 | 24 |
| Osa07LNT0371400.1 | osa-miR5148c | Translation | 4.5 | 12.256 | 1 | 24 |
| Osa07LNT0371400.1 | osa-miR5504 | Cleavage | 4.5 | 12.813 | 1 | 21 |
| Osa07LNT0371400.1 | osa-miR2878-5p | Cleavage | 4.5 | 13.788 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0371400.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0371400.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0371400.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0371400.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0371400.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0371400.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0371400.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0371400.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0371400.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0371400.1 | 7 | pms1 | Physiological trait | Sterility | nan | nan |
| Osa07LNT0371400.1 | 7 | QHd7 | Physiological trait | Flowering | RZ488 | RG477 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)