© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0372100.1
CACTGCGGTTCATTCCTATGTTGATCTGGTGAAAATATATACAGTTAGTAGGTTACACTTACACGAGCTTGTTACGTACTACTTGTCAGTGTATCACAAGCATCGGTCACTGGAAACGATCTACTCTTCTGGCCTGTTGGCGGGAGCTAATGTTAACCCTCTCATCTCGCAGCATGTTCATGCTGGGAGCCAACAATCTTGTGTAGCGATCAAAATACAGAAGCTGCTTCATCAGAAGAGCGAATTCGCGAGGAAATTTCAATCCATACGACTCGCTGACCCTCACCAGATCAAGAAACAATGCATTCATCTGTCTCTCGTCAACGACAACATTAGCCGATACTGCTGTAGCATCAGGAGTTCTTGCTGTTGCAACTATGACTTCAGTATCCAAATCCTGCGCACAAATGAGAATGCAATTGAAAATTAACCACGAGATAAGTGGTAAAACACTAACTAAAGAACGATATCCAAATTTGACTAGCCAGTAGCCACAAAAATTCCTGTCCATAAGCCACTTTTGCTTGCATTCAGCATTTTACTACTGCCAGACCAGCGCCGTGTTTAGTTCCAAAGTTTTTCTTCAAACTTCCAACTTTTCCATCACATCAATACTTTCCTACACACACAAACTTCCAACTTTTCCGTCACATCGTTCCAATTTTAACCAAACTTCCAATTTTGGTGTGAAACACAGCCCAGGTTTCACCCTGGCATCATTTTTGGCACTTCAACAGTCGAAATTGGGTCACCATGTTCACGGGATAACCAGGCCTTCATGACATCAAATAACCTACTATTTTGGGAAATATTACCTGTATTGATGAGAATATTTTTTCCAAGTCCTTTGCAAATTCATTAACATTTATATCATTCCCTGTAGCACCCATTTCAGAAAGGGCTGATGCCATAGCATTATAATCGTCAGTTGCAAATGAAGCCAAAAAGACCTCCATTGCAGCCCAGGTCCTTGGCGATATCCGGCCAACAATTCCAAAATCAAGAAATCCAACACGTCCATCTCGGAGCAACCATAAATTTCCTGCATGCACATCTGCATGGAAGGATTCACATGAAATCAAGCTTCCAAACCAGACATTAAGTGCAGTGACTAAAGTCAGCTCAGGATCAGGAACAAGAGACCTTATAGAATCAAGGTCAGTGAGTGGAACACCGTACAATCTTTCCATAGTTAGGACACGCTTTGTGCTACAGTGGCGATACACAAAAGGGGCTTTGGCCTGCCTGTCAAATCCCATTGCATCGATGTACCTCTGAAAAGCCTCAATATTCATAGCCTCTTTCCTGAAATCAACTTCTTCAAGCATAGATTCCTTTATATCCTTGACAATTCCTACCAGTGATGTCCTCTGTAGTTCAGGGTTTAGAAATTCCAAAATACGTGCAACAACATAGATAAAATTCAGGTCAGCCACCAAAGTGTCTTCAATACCAGGCTTGAGGACCTTGATAACCACATCCTTCTGAGAGCTCTTCAACCTTGCCCCATGAACCTGTGCTATTGACGCAGAAGCTATTGGAACTGGATCAATGTATTCATATACACTATCCAACGGCTGTTGCAACTCCTCACGCAATATTGACTCAATCTCACTATATGGAACAGGTGGTGCACGGTCAAAACAGTTCTGGAATTCCTCGACATACTCTGCAGGAAACAAAGTTGGTGCAGAAGCTACGAACTGACCTAGCTTGATATAAGTTGCACCCATGCGCTCAAAAAGCCTTCTAAGATAAAGAGGAGAAAGCAAACCCAGCTGCATCTGAGCTGGTATTCCTGCTGATGTGTTGGCTGTCTTTGAGAAGTCATTTAGCCACTCCCCACCAACCCCAAGGACAGCTTGGATCCCTTGGGCAAACCTAAAAGCACCTCGTGGCCCTGTGCTAATTGATGTCTGTAGAAGGTCCTCAACCAACTTAGGCAATTCGCCAGCTCTATCTTGGAGGCGAGTGGAGAAGTCCTGGGCCTGGCTGTACCTCGCGAAAACCCTAATCCCGACCCGCCGCCCCTTCTCCCGGCTGGCCCTGATCCTCCTCCCCACACGCGGGGGCGAGCCTCCCCCGCCGCCCGCCACCAGGGGGAGGAGGCGGAGGCGGCGGTGGTGCGCGGGGTGGGGGTGGCGGTGGAGGACGAGCGGGGAGCGGGCCGCGGCGGCGCCCCTCGCGGCCGCCGCCGCCATGGGTGCGGGGCTCGCCGGAGTCGGGGACGACGATGACGTCACGGGACGCGTCTCCAACCTCGTGTCGCGCGTGGGAAGCGTGAAGAGAGAGAGAGAGAGAGCATCAGAGCAGTGGAGTGGTCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0372100.1 | 7 | 7153308 | T | C |
| Osa07LNT0372100.1 | 7 | 7153459 | A | C |
| Osa07LNT0372100.1 | 7 | 7153653 | C | T |
| Osa07LNT0372100.1 | 7 | 7154493 | G | A |
| Osa07LNT0372100.1 | 7 | 7155204 | T | C |
| Osa07LNT0372100.1 | 7 | 7155389 | C | A |
| Osa07LNT0372100.1 | 7 | 7155656 | T | C |
| Osa07LNT0372100.1 | 7 | 7156062 | A | T |
| Osa07LNT0372100.1 | 7 | 7157497 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0372100.1 | osa-miR5143b | Cleavage | 4.5 | 18.844 | 1 | 24 |
| Osa07LNT0372100.1 | osa-miR156b-3p | Cleavage | 4.5 | 22.065 | 1 | 21 |
| Osa07LNT0372100.1 | osa-miR395u | Cleavage | 5.0 | 9.207 | 1 | 21 |
| Osa07LNT0372100.1 | osa-miR1850.1 | Cleavage | 3.5 | 5.542 | 1 | 21 |
| Osa07LNT0372100.1 | osa-miR1850.1 | Cleavage | 4.0 | 4.13 | 1 | 21 |
| Osa07LNT0372100.1 | osa-miR5143a | Cleavage | 4.5 | 18.844 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0372100.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0372100.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0372100.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0372100.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0372100.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0372100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0372100.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0372100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0372100.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0372100.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)