© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0372400.1
CATCAATGTTCTCCCGTACGCCGTGCCCAGCCCAACCGCGGCTCAGGACGACGCTAGCTCCTCGCCGGCGGCGACTCAGTTCGCTCGACCGGGACGGGACGACGGCTCCCCTCTCCCGCGAAGCTCGCCGACGGCGACGGCGACCGCCACATCTCGTCCATGCGCAGCTCCGGTCGGAGATTCCTGCCTTTCAGCTTCAGTCACTCCATGAAGCACACAGATTGGAGATCCACCAGCCCTGCTGTGTGATGTTTGTCTCCCCCACTCATCAGTTTTTGATGCGTGTGCTCATCCGTCAACGACTCAACGATGGTACGCCGACGGATCTCGACCAATAATCGGCAGGATTTCCATCCCACAGCTCGCATCTGTATAATCTGCATATCTTATAGGTGTAGTATGTAGGAATTTAAAATGTGCTGCATTTAATTTCTACGTTTTTCACTTTCCTGCATTTTGTACAACCAGTGTGCTCTAAAAAAAAAACTACTGTTCCTGCTTTGCGGAATCACATAATGTAATGCAAGATGGGTTCGTCGTTCGGCGAACATAGTAGCACACAGGAAGGTGTTTCAAACAATTGTATCACGACCAGGATTTCTGTCCACCGGGTTTTCTTTTGTCTTGCTAGTAGACGATTGTAAAGAGTTTGAGTGACTCCTAGCTTTGGTGTGTAACCCTAAACATAATACATATGGCTCAATGTTGTTGCATACTCTCTCCGTCCCATAAAAAACTAACCTAGTATTAGATGTGACACATTATAGTACTACAAATCTGGAGATACCACTGTCCAGATTTACTGTACTAAAATATGTCATATCCAGTCTTAGACATTTTTTCGGGATGGAGGGAGTATGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0372400.1 | 7 | 7237313 | A | G |
| Osa07LNT0372400.1 | 7 | 7238042 | T | C |
| Osa07LNT0372400.1 | 7 | 7238750 | A | C |
| Osa07LNT0372400.1 | 7 | 7239325 | A | C |
| Osa07LNT0372400.1 | 7 | 7239370 | G | C |
| Osa07LNT0372400.1 | 7 | 7239623 | A | G |
| Osa07LNT0372400.1 | 7 | 7240132 | T | A |
| Osa07LNT0372400.1 | 7 | 7241018 | T | C |
| Osa07LNT0372400.1 | 7 | 7241324 | C | A |
| Osa07LNT0372400.1 | 7 | 7241729 | T | C |
| Osa07LNT0372400.1 | 7 | 7241773 | A | G |
| Osa07LNT0372400.1 | 7 | 7242010 | A | G |
| Osa07LNT0372400.1 | 7 | 7242155 | T | C |
| Osa07LNT0372400.1 | 7 | 7242182 | C | T |
| Osa07LNT0372400.1 | 7 | 7242871 | T | C |
| Osa07LNT0372400.1 | 7 | 7242928 | C | T |
| Osa07LNT0372400.1 | 7 | 7243697 | T | C |
| Osa07LNT0372400.1 | 7 | 7243752 | G | T |
| Osa07LNT0372400.1 | 7 | 7243911 | C | T |
| Osa07LNT0372400.1 | 7 | 7244237 | T | G |
| Osa07LNT0372400.1 | 7 | 7244656 | G | T |
| Osa07LNT0372400.1 | 7 | 7244840 | A | G |
| Osa07LNT0372400.1 | 7 | 7244849 | A | G |
| Osa07LNT0372400.1 | 7 | 7244879 | T | C |
| Osa07LNT0372400.1 | 7 | 7245255 | T | C |
| Osa07LNT0372400.1 | 7 | 7245260 | A | C |
| Osa07LNT0372400.1 | 7 | 7254238 | A | G |
| Osa07LNT0372400.1 | 7 | 7254323 | T | C |
| Osa07LNT0372400.1 | 7 | 7254390 | C | T |
| Osa07LNT0372400.1 | 7 | 7254581 | A | G |
| Osa07LNT0372400.1 | 7 | 7254636 | A | G |
| Osa07LNT0372400.1 | 7 | 7254733 | T | C |
| Osa07LNT0372400.1 | 7 | 7255104 | T | A |
| Osa07LNT0372400.1 | 7 | 7255186 | G | A |
| Osa07LNT0372400.1 | 7 | 7241835 | C | A |
| Osa07LNT0372400.1 | 7 | 7255200 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0372400.1 | osa-miR5837.1 | Translation | 4.5 | 17.252 | 1 | 21 |
| Osa07LNT0372400.1 | osa-miR6246 | Cleavage | 4.5 | 24.016 | 1 | 23 |
| Osa07LNT0372400.1 | osa-miR7694-5p | Cleavage | 4.5 | 20.079 | 1 | 24 |
| Osa07LNT0372400.1 | osa-miR1436 | Cleavage | 4.5 | 14.076 | 1 | 21 |
| Osa07LNT0372400.1 | osa-miR1439 | Cleavage | 4.0 | 13.152 | 1 | 21 |
| Osa07LNT0372400.1 | osa-miR1849 | Translation | 5.0 | 20.079 | 1 | 21 |
| Osa07LNT0372400.1 | osa-miR1862a | Cleavage | 4.0 | 18.971 | 1 | 24 |
| Osa07LNT0372400.1 | osa-miR1862b | Cleavage | 4.0 | 18.971 | 1 | 24 |
| Osa07LNT0372400.1 | osa-miR1862c | Cleavage | 4.0 | 18.971 | 1 | 24 |
| Osa07LNT0372400.1 | osa-miR1862d | Translation | 3.0 | 18.971 | 1 | 24 |
| Osa07LNT0372400.1 | osa-miR1862e | Cleavage | 4.5 | 18.793 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0372400.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0372400.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0372400.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0372400.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0372400.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0372400.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0372400.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0372400.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0372400.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0372400.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)