© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0372500.1
AATAATAATCAAGCGGTACCATTCATCCCTAGATACAATATTTCTAGAGCTTTGCTTAACACTAACACACAGCTATATAACCTAGCTAGCTTCATGATGACTTCAATATTTCTCGACCTTACTTAATACTAACACACAGCTATAACCTAGCTATAGCTTCATGACTTGATCTACCAAGCTAGGCATGCATATGCAAGAACAAGAAACAGATTAGTCACACCATAATGACTAACTAATTATAGATTCATATCAGCTAGTAATATAGTTCTTCTAGGCCCTGATCAGATCATGCAAAATTAAATTACTTACCTAGTTTGGTTCCATGCATGCATGATACACACAACATATATAACACTCTTCTAGTTCTAGGATTCTAGATTGATTTTTCTTCTTCTTTTCCCCATGAAGCCATGCACCATCCATGCATTGACCCATTCTGCATATGCCTCATGACTTGAGTCATCACAGTATATTTCCAGACGTTGACAAGTCAAACGCCGGCAGGTCGGACCACCCGCCGCCGCCGCCGCCGGGAGCAGCACTGCCGCCGGCACCATCACCACCGCCACGGTGGCCGCCGCCGCCTCCCCAGAACTGCAAGCTTCCACGGAGACCGAGGAACTCAATCGGCGAGCTCGCCGTCGTCGTTGCCGCAGACGGTGGTGGGTGGTTGTCGATGTCGTCCATCTTCACCGAGGCCATCTGCGTGATGAGCCCGGCGGAGCCGGCGACGCTGGCGGCGTTGGCCGGCATGTCGCCGCCAAGGCCGCCCGCCGCGACGTCGCCAAATGGATACGATACCCCGGCGGCGGTGGACATCAGCGGCGGTGGATGGACTGCGGCGTTGGATCGGGCTAAGAACGGGAAGTGCGGGAGGCGCTGCCGTTCGAGCCCGAGGCCGTCGCCGCCGCCGCCGCCGCCGAGCTGGTAGTCGACGGCGGCAGCCGCGTGCAGCGAGCTGAGCTCCGGAAACCCTAACCTCGACGCGCCACCACCACCACCACCACCGATGATACTACCATGGCCACCGCCGCCGCCGCCATCAAACCCGAAAGGGAGCTGCAGCTGCGCATGCGGCGGCGCCATGACGCCGCCGGCGACGGCGGCGGCGGGCTTCTTGGAGTTAGAGGGCTTGGTTCCGCGCTTGTTGCGGCGGAAGCCGCCGCCGACGGGGACGTTGCGGAGGGCGCCGCCGCGGGTCCAGTAGCGGCGGCAAGCCTTGCAGAAGTGGCGGGGCTGGGTGAGGGAGTAGTTGTTGAAGTAGCAGAACTTGGTGTTGGTGGAGTCGCAGCGCGGACACTTGAGCCCCGGCTCCGGCTGCGGGATCTTCGCCATCCTGGCGCGCTCCGCCATCGACACCGGCCGCGCCGAGGAGGCGCCGCCGCCACCACTCACCGGAAGGATCCCGGCGGCGGCCATGTCTGGCGACCGAGGAGCAAGCAGCAAGCTGGCCGAGGTCATCGGCAGCTGATTCGCCTCCACACTTTGGTGAAGCTGATGATGGCCATGGTGAGCTTGATGCTGATTCCACATGATGGATCAAGAGAGGTAGTGGAGTTGATCCCCCTTTTGATCTTTTTCTAACCCCTGGATTCTCCTTTTATGATCTTCTTCTTTAATTTTCTTTTTTGGTCCTCCCTTGCTTCTTTGTGAGATATGTATGTCAGGGTGTATGATGAGAATGCTTTAAGGGTTCATGAATGCATGGGGGAGGTTCAATTGTTCAAAGGAGTGGAGAATGACATCCACTATAAGGTGATGAAGAAGGGGATGAGAACAGAGAGAGCTAGTGAAAGGGTAAGATTTGGACAAGGGAACTATTCTCTCTCTCTCTAGCTTTCTACCTCCTTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0372500.1 | 7 | 7605207 | T | C |
| Osa07LNT0372500.1 | 7 | 7605703 | T | C |
| Osa07LNT0372500.1 | 7 | 7606136 | A | T |
| Osa07LNT0372500.1 | 7 | 7606267 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0372500.1 | osa-miR5525 | Translation | 4.0 | 21.268 | 1 | 22 |
| Osa07LNT0372500.1 | osa-miR160a-3p | Cleavage | 3.5 | 14.177 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR160b-3p | Cleavage | 3.5 | 14.177 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR160c-3p | Cleavage | 3.5 | 14.177 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR160d-3p | Cleavage | 4.0 | 14.177 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR160d-3p | Cleavage | 5.0 | 24.525 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR414 | Translation | 3.5 | 22.51 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR396e-5p | Cleavage | 4.5 | 24.228 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR810b.2 | Cleavage | 3.5 | 15.008 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR396f-5p | Translation | 4.0 | 24.508 | 1 | 22 |
| Osa07LNT0372500.1 | osa-miR396g | Cleavage | 4.5 | 24.228 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR396h | Cleavage | 4.5 | 24.228 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR396d | Cleavage | 4.5 | 24.228 | 1 | 21 |
| Osa07LNT0372500.1 | osa-miR5501 | Cleavage | 4.0 | 8.785 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0372500.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0372500.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0372500.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0372500.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0372500.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0372500.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0372500.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0372500.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0372500.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0372500.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)