© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0373800.1
ACCAGAGCCATGGCCTAGTCCCTGTGGCCTCCACCCTGACTAGCCACTTGTCAACAGTAGGTTTTACCAAACTTGCAATACCTCACATTACATTTAAGGAATATTGGCATTATTAATACACAACAATTTAATTTTTTGTCCATCAAACATCATTTTTTTTTACCAGAGAGAGTAACCAAGTATTCAAATCGCATTAGATGCCTTCTCTTCTGCGAATTCAGAAACAGCTATCTCATCTTATAAGTTCAGATTTCAGAATGAACTCCAGGATAATTGAGCCACCAGCGAATCCTCGGCCCCTCCAAGCAACAATCGCCCAGCTTCATTCCCCCTGCTCCAGCTTTGGGGAGCAGGGGAGACAGGGCGGGACAATGGAAGAATCGCCCATTTTTCGCTTGCGATTGCGTGGCAGAATAACTCACGGTCTCTGAATGCACAAGGTGAAAATGGTTCCATGTGTTTCTGGTATCCCAGTAGGCCAGTATACTTCTGATCAATGCTTTGTGTGGAGATCTCTGGTTTCTATAAACCCCAGGATGATGATGGCTCTTGTGAGTTGTGACCACCAATTTGTCCAATGGTTGTCCTTGCTCCCAGCGCTGGCACGAATTTGAAGGACTGATTAGTTTTAATCCTCGGACAGCAGCCTGGTGATCAAAACTTCGATGATCTTCCTGAATGATGGAAAACAGAAAAGTTACAATATAAGCCAATCAGATCTTCTAGTCTCTATAAACTAAAGCAACAATATCTTGAGATTAGCCTTGAAAAAAGAAGTCCTGAACTGATGTTTCAAAATTTGTTCACACCCTTCCTTACAAAAGTTCAAAGAATGCAAAAGCATGTCACAGTCTTACAGAATGTGAATTAAAATGTCAGGAAAGCCTCATCGGACAACATGAAGATTCAAAATTAGATCGGTTAGACTTCTACTAGTACTTCATAAATTAATTGGTCACTTAGTCATCTCTTAGCATTAGGTGTCCTTTTTGTTAAAGAATAACCTTGACACTGTAAACATTAGGGTAATAAAAAGGTAAAGATAGGAAAAATGATGAAATGGAGCACACGGCATTAAACGAATTTTACAGGAAAAAGTTCAATTCCCTAAATCAGGGAAATTCCTGAGAAATAGAGTCCAGAGTGTCCATCAGCTTTCTATGTCATATTATCTTCATCTATTTTGTGATTTTCCATATCAATATCATCTCTTTGGGTAATGCTGCTTAACCTCAGACATAAATAAACAACAAATATTCTCTTTGCTAATGACAACTTTCAGTAGCATATATAAAAAATTCAATCAATTTATCACTCCAATGTTGTCTTATATTCACATGGAAATTATTATAAGATTTTGCACTTAACATTCGTGTCCCTGCTCTTTTTTTATTCTCCACAACAAATATCTCCTAAATGTATTACAGAAGAGAATCACTACTGTAAATCCAGGTAATTTGTTGTCTTAATTTAATTCAATCATAAATAGTGTTCAAGTCGACAATGAGTACTCAAGCATAAAATTTGCTGAATAATCCAGCCAAAACTAAAGATAAATTTCCACAGTGAAAATATGAGAAATCAGACAACACAAAGTACCCATATATCATTAAGAAAAAATGTATGTTCCTATAGCTCTAATGACCCAGGAGACAGTCAGACAGTATGTCTGTACTGAGGAAGAAGCGGAACACACCACAATCAAATGTGAAGTTCATCCTGGTATGAGTTGTCACTGTAAAACTACATCTTGACATGAGCACAGCAACTTCTGCCTGCAATGCAAATTCTCAGTGGAGGTTTTGTTTCTTGAAAAAGAAATTTCTTCTTTAAATGGATGGTAGTTCACTATTAATTTTACATTCATGCTTGTAACAAAATAAGAGCAGAAAAATTTTACCTTGTAAACAAGCTTGGTGAAAAAAAATTTACCATATCATAAATTCATAATAGATGGAAGAGGATTGAACATATACGACTATTGATCTAGATGAAGGTCACAGACTGGCAGCTATGTAATCAGCATGGTCCAGAACTATAAACTGCCAGTAGGGCATTTATTAACTGGTTGTTGCTGTCATGATGACATGTGGTGTAAAGGCCAATGCACCTTGAAATAGCCAGGCAATAGATGGAACATGATTCAGCGATTTTGAACCGTATAGCGCCAACAAGAGAATAACAAAAACTCAAATTTTAACAAAATAAATCGAAGTGGCTAATGGATTTCTATCAAGTATCAACCCAATCCCATCCTAGTTTCCTAGCTGCAAGTTGCTTGCAGCTATGTTCCTCAGCCAAAGTCAAGATTGCTAGAAGCTAAAATTGAAGTAAGATCAGAAAACTATGTAAAGGCCTAAAACCAGTTGCACTTACCAGTGTACTAATATTGAAAAGTGTTCTTCTTTCAAATAAGATGTTTGAGAATAATGTACAACACATAAAACTGGGAAAGAAATTTCTATACTTACTATTTGTAACAAATATGCCATGCTAGTCAAAGAAACAGATAAGTCGTGTGCTCCCAATTTGTGATTTCAGTAGTTTGAAGACAGGATCTCAATATGATTCACCAGATTAATCAAAATGCAATGGGTTGGGGTGATCACCCAAAAAGACCGTATGGAGCACTTCTGCTGCTAGCTAAAGCAGCTTCCTCAAATATGCATTGATAGTAAAGAAGACTCAACTGCCCAGAGAATAAGTGACGTCTACTTATATCTGAGATAGTACGCAGCTATTTGCTCCTGGTGAGTGGTGACAGAACCAGAGCTTGGTTCATGCCAATTGCAGCAAAACTCTCTGCCTTCTATTTACCAAAAGTGATGCTCTCCAGTTTGATCCAGAAAGAAGATTATTAGCAAACCTGATACAGTTGTAGAACAATAGGAAGATCCCCTTTACCCATGTTACTGCAGATTATTCACAACACCTGATGAACTGAATTAGACTTTTTCAGTTACACTTGGAAAACGGCTGTAAAAGAGCACTCCAGCGATTAACTTCTCCCATAATCACAGTGAAGCAATGTCAGCAAAAACTAGCTGTATCTTACACAGTTGTTGCCCTATCAAGCATTGAATAGCCCCAGTACCTAGCCACAAAAAGGTCCTGCCACAAGGACTCAAGGACATAAGGTCCTAGGGTCCCAACTCTCAACCTTTACACATGAGCTGCACAAGACAGACAAGCAGGCAAGATCTTCAATAGTTAAGCGGTGTGCAATTTCTTTAAGCAATCAAAGGGGGTGTCCTCTATGATTCATGCATTCAATCAAATCATCAACTGCTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTATACAACTTACCAGTCCATCCTGTTCAAATGGTAATCTAGTATTTATTTTGCACATGTAGGACGAGCAACACTCAACTAAGCACTTCTGATGCTGCAGTGTTCTACATTATCTTACCCAATGTGCTTGCTCTGTATGTCTCATGAGGGCCATTAAACCGTCAACTGTTTCATATATCTCTTTCCTCCTCTTATGCCTTGTATCTTTAGCCAAAAACTCATGAACCTCACTGCCTACCTGGATTGAGCTACTTCCAGGCACTTTCTCAATTCCCCAATTACGCATGCTTGTGCGTGCATCGATCACACCATCCCACCTTCCTTCCAAAGCACTACAATTAGAAACCAGGACTTGATAACTAGAATTAAATGGTTCTAGTTCAGTTATCTTCTTACTGACATATTCTATAAGCTCTGCATTACCATGTGCAACACAAGAACAAAGCAACGTGACCCATATGACAACACTAGGTTCAAGAGGCATGCTTTCAATAAATAAAATCGCCTCCTGTAAGTTACCTGCTCGACCAAGTAAATCCACCATGCACCCATAGTGCTCCATTCTTGGTTGAATGTTATATCGCTCAACCATTTCATTAAATATACTCCAACCTTCTTGCAACAAACCTCCATGAGCGCAAGCAGCGAGTGCAGCAATAAAAACTGTGTCATCCAGTTGAACTCCTTCTCTGCACATATTATTGTAGACCAAAAGAGCGTCTCTACAAAGACCATTAAAAGCAAAGCCAGAAATCATTGTTGTCCATGTAATGATACATCTTGTTTCCATTTTATAAAAAATTGACTCTGCCCTTCCTACATCCCCACACTTTGCAAACATGTCTATGAGAGCATTTCCTAGTGCAACAGTGAGATGGATGTTGCTTTTACCAATGAAAGAACTGATCCAGTTGCAGTATTCAACACTGCCCAATTGAGCACATGCCGAGACAACACTCACTAATGTCGCCTCATCAGGTCTGAACCGTCCTTCAAGCATCATCAGCTGAAATGTGCGCAATGCCTCATCGTATCGCGAGTTGTGATTGTATCCAGTTATCATTGCATTCCATGAAACCAGGTTCTTCACAGGCATATGATCGAACAACTCATTCACTGTATCTAGATCCCCAATCTTGGCATAAGCAGAAACCATAGCAGTCCACGAAACCACATCCTTTTGGTCCATCCGATCAAACACGGAACGTGCAGCCTCCACATCACCACCGTTGGGCGGGACGCCCTGGGCGCGCATGGCGGCGTAGGCGGCGAGGGCATCGGCGGGGGCGGGTGCGGGGGCGGGGCGGCGGCCGCGCGGCCTGGCCCCGGCGAGGCGCTCGACGAGGGTGTTGTGGGAGACGGTGGAGGCGGCGGGGCCGGCGGCGCGGAGCGCGGCGGCGGCGTAGCGAGGGGAGTGGGCGGAGAAGGCCGCGGCGACGAGCGCCGGGAGGAGGCGCGGGCTGGCGGCGAGGCCGGCGGCGAGGAGACGGGCGTGGGCCTGCGTGAGGTGGGCGGTGGAGCCGAGGGTTCGGAGGATTCGGAGCAGCGCTTGCTCCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0373800.1 | 7 | 9072027 | C | T |
| Osa07LNT0373800.1 | 7 | 9072218 | A | T |
| Osa07LNT0373800.1 | 7 | 9072654 | A | G |
| Osa07LNT0373800.1 | 7 | 9073529 | C | G |
| Osa07LNT0373800.1 | 7 | 9074614 | T | C |
| Osa07LNT0373800.1 | 7 | 9076414 | A | C |
| Osa07LNT0373800.1 | 7 | 9077089 | G | A |
| Osa07LNT0373800.1 | 7 | 9077719 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0373800.1 | osa-miR5532 | Translation | 5.0 | 15.26 | 1 | 22 |
| Osa07LNT0373800.1 | osa-miR5543 | Cleavage | 5.0 | 13.797 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR812q | Translation | 4.5 | 19.201 | 1 | 24 |
| Osa07LNT0373800.1 | osa-miR5817 | Cleavage | 4.0 | 14.507 | 1 | 24 |
| Osa07LNT0373800.1 | osa-miR393a | Cleavage | 3.5 | 10.872 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR395u | Cleavage | 5.0 | 13.319 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR396a-3p | Translation | 5.0 | 14.301 | 1 | 20 |
| Osa07LNT0373800.1 | osa-miR396b-3p | Translation | 5.0 | 14.301 | 1 | 20 |
| Osa07LNT0373800.1 | osa-miR396c-3p | Translation | 5.0 | 14.301 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR393b-5p | Cleavage | 3.5 | 10.872 | 1 | 22 |
| Osa07LNT0373800.1 | osa-miR426 | Cleavage | 4.0 | 8.449 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR1861n | Cleavage | 4.0 | 21.339 | 1 | 22 |
| Osa07LNT0373800.1 | osa-miR1872 | Cleavage | 5.0 | 20.838 | 1 | 24 |
| Osa07LNT0373800.1 | osa-miR2095-3p | Cleavage | 4.0 | 7.719 | 1 | 20 |
| Osa07LNT0373800.1 | osa-miR2101-5p | Cleavage | 3.5 | 15.404 | 1 | 22 |
| Osa07LNT0373800.1 | osa-miR2864.1 | Translation | 3.0 | 12.685 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR2864.1 | Translation | 3.5 | 13.507 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR2863b | Translation | 4.0 | 9.769 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR3981-3p | Translation | 4.5 | 8.939 | 1 | 21 |
| Osa07LNT0373800.1 | osa-miR5161 | Translation | 4.5 | 11.416 | 1 | 20 |
| Osa07LNT0373800.1 | osa-miR5491 | Cleavage | 4.5 | 9.356 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0373800.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0373800.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0373800.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0373800.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0373800.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0373800.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0373800.1 | 7 | Hd4 | Physiological trait | Flowering | nan | nan |
| Osa07LNT0373800.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0373800.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0373800.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0373800.1 | 7 | qSSP7 | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0373800.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)