© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0373900.1
AACTGGTTGACAATTAGATATGGCGCAAAGTTAGCGTCTTGAATTCATAAACCTACCATCAAGGGTAAGCCTTTACTTCCTAATAGCTGAGCACTAACAGAACTATATCATTAGGAGCACTATATCATCTAAAAAAAAATGCTCCCTACCCAACCTAGATGTATCTCATAGTATCAATCTAGAGTACTACAAAAGTGCCTAACAAGTACTCCGTATTTGGTTCCTTCAAAAAAAAAAGAAGGATCAGCCCTGCTGCACACTAGCTGACTAACACCACCTCAACAAAAGAACATCGAACTGCAGACATCAGCATGCAGGCGCGGCAACTCTGGGACCACTGCTCCTGATGACGAAGGGACACCACCACTTCCAGACGAAGTCTCAGCGAATTCCTCGAATTTCATGAACTGGCCCATCTGCGCTGCTGCGAGATGAGCATAACAGATAGGTGCCACAACAGATATTGCAGTGGTGCTCCTCTGATACACATAAGAAAGCGACAAAACTAGTTTCTGCACGTCATCGGGCAAGAAACCAATCTCATCGAGCAAGACATGGTAATGGGTGGGCCTTGAGGTACCTATAGGTCCAGCATGAGCATACATGTAGAAATCATACTGTCTTGGATGAACAATACCAGAATCTACAACAGTCCCTGGAGGAACGTTGTCTGGAGTATTTTCTTGGAAAAGTTTTGTGTGGTGATTCTTTTGAGCAATGATCACTGTGAACTTAGGAATTGGCCCCTGATCCATATATTGATATGCCTTTATAATTTGATTAAGCTCAACATTCAGTACTTGGCTAAATTGAGACTCGCTCACACCATCCCTGAAAATGATTATCTGCTTCGGCTTTCTTTGTTGACTGGTCTTGTAGAAGTCCAGTAGAAGTTCCCTTATTATGCCATCATCTTTTCCATCGTCCAGTGGCTTAAAAAGAGAATCAATCATCTCTACCTTTGGAGACTGGGTCCGGACAGATGCTCTGTAGCGTGATATCAGCGGCCAACATCTGGACCCAACAACCGCAGCAATTGATGGTACATCAGCTCGACCTGGCGAACCATGTGAAACATCCATTCCCAAAATTAATGTGGGTGTTTGATTGACAATGGGAATCATATGTCGATGCTCCAATGAAAGCTTGGAGTTCATTCCACCAAGCTTAGCATTGATTTTCAGAAGAACATTGGTATAGTACTGATCATTCATCTTAACACTAGGAACAATGCATTGAGTAATAATACCCATCTCATGAAGGTTTTTCTTCTTCCATGGCCCATAGAGATCACAATTTTTCCTTTCTGGTAAAACACACAGCAAAAATTCAGGAGGACCAGGAAGGTTTGCTTTCACTTTTTCAAACATGCTTTCAACCCTTACAACAGGAGTACATCTCCTAGATTGGCTATCCTCATCTACCAAGGTGAAAGGGCGTTCAATAATAATGCCTTTAGTTCGTCCACAGTTTATCAGGTCTCTTGAGATCCGGCTCATGTCACACCGAGCAGAGAAATTAACAATTGCCCAACGCTCAATCTTGACAGGCTCAAATAGCCTCTTGTTATTGTAGTTCCATCTGCCTCTGTTTGGAATGCAATCTTCACTATTCCCCACGACTAGCGTTGGTGCAGACAGAACACGACCATCGACACGAGTGAGTTGTTTCTCAATTTTAATTCCACAAGAAGATAAGATTGGATCATCATCATATCTATTGTTTTTTACAGCATCAGTAACAACTCGCATGCGCTCTTGAGGTTTCTGACGTGATTTTTCAACCAAGGTTGCTCTTTGTTGAGAAGAAAGCGCCTTTGTATATCTTTGAAGTGATACCATATGGCACAGCTCAATTGGAACATAATTTGGGCGTTTTGGTTTTCCCACATCAAGACATGGCAAATAAGGCATTGTTAAATCCACCTGCTTGGACTTAAAATATTCCTGGACAGTAATTTCAACGGTTTCACCTTCACTGCTTCCATTTCGTACTTTCATGGGGAATGTTTGTCTAGAGCATGGCTCATCACTCAGACCAATGATCTTGAACTCCATGTTATTGTGAATAGCTTTAACTCTCAGGTTTTTCAACATTTTCTTGGCCCTGGGCCAGTCGATATCTCTAATGTCTCTGACATTTTGATTTGTAAGGAGGAAATCAAAAACCGGTCCAGGAGTCACAATCATAGTGGTTGAAACATCCATGTTCAAAGATAAACCACCAATGGTAGTACGGAAACTCGAGTGGAGTCCACGACATCCACTAACTCCACCAGTTAAATCAACTAAGTTTCTAAAGTCATCACTGAAAAATGATTGCCTAACAAGCAGGCAACCTCGCTTAGCCTGTTGTTGCCTTAAGACAATATCAAGGACTCTCAGAGCATCCTGAGCATGATCTGACTCGCTTCCTTGAAGGGCCAAAGCTACTGACTTCAGGGGAATCTTTGCTGCATAACTTATGCCCACTACAATTTTTTTTGCAAGATGTGTGCACTTTGATCGCTTCTTGTCACCTTGATTAGGGCTTCCATGCCCTAGACTCCCACCAGCAGCTCTTGAAGATGTTTCCTCCAAGATAACAGTGAACTCAAAGTTGTTCTGTGGAAGAGGCCCCACAGTAAATAGACATTTTTCACCATCATACGCAAATTCCTTCCCAGCAAGCTCAGAGCTGTATGTTTGCAGCACTTTATCCATGACCTTTCGGCCAATACCCTTTCCATCAATCACCTTATCATCCTCAGATTTGATGGAAACACTGTATTGGTAGAAAACCGCATCAATTCCACTAAGCTTCACAGTGAAGTGGTTTGAGAGCAGCTTGATTTGCTTTCCTTCACGGCCAAAGCTAGGTCGTGCAATAGGTACTCTCTTTACAGGATTATCATTATGTACTTGGACAATTTCACCAATTTTGGCAGCCATGTTATCGGACATCTGGATGAGATGTGCCGGCGTCGGGCTCCGGGCTGGGAGGAGCAGGTCGGCGCCGGTCGGGGAGGAGCAGAGCAGCGTCGGCGGCGCCGGCGTCGGGCGGGGAGGAGCAGGCTCGGCGCCGGCCGGGGACAAGCAGAGTGGCGCCGGCGTCGGGCGGGGTCGGCGTGGGACGGGGAGGAGAAGGGGCGGCGTCGGGCGGGGAGGAGAAGGGGCTGAGCCGGCGTTGGGCGAGGAGGGCGGCGTCGGCGTCGTGCGGGGAGGGCGGCGGCCGGCGCACAAACCCTAAATGCCGCTCCACCCCAGCGAACGCGACGGGAAAACGAGAGAGGAGAGGGAAAATATCGAACCGTTTTTTTTTTTCGTAATGGCAGTCGTGCGTAACATTTTCCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0373900.1 | 7 | 9465268 | C | T |
| Osa07LNT0373900.1 | 7 | 9465408 | T | A |
| Osa07LNT0373900.1 | 7 | 9465691 | A | G |
| Osa07LNT0373900.1 | 7 | 9465827 | A | C |
| Osa07LNT0373900.1 | 7 | 9466977 | T | C |
| Osa07LNT0373900.1 | 7 | 9467133 | T | A |
| Osa07LNT0373900.1 | 7 | 9468961 | T | C |
| Osa07LNT0373900.1 | 7 | 9469392 | C | G |
| Osa07LNT0373900.1 | 7 | 9470585 | A | T |
| Osa07LNT0373900.1 | 7 | 9470867 | C | T |
| Osa07LNT0373900.1 | 7 | 9471262 | G | A |
| Osa07LNT0373900.1 | 7 | 9471783 | G | A |
| Osa07LNT0373900.1 | 7 | 9471922 | G | A |
| Osa07LNT0373900.1 | 7 | 9472064 | A | G |
| Osa07LNT0373900.1 | 7 | 9472284 | C | T |
| Osa07LNT0373900.1 | 7 | 9472925 | G | A |
| Osa07LNT0373900.1 | 7 | 9473011 | G | A |
| Osa07LNT0373900.1 | 7 | 9468410 | A | G |
| Osa07LNT0373900.1 | 7 | 9462703 | C | T |
| Osa07LNT0373900.1 | 7 | 9467457 | A | T |
| Osa07LNT0373900.1 | 7 | 9462597 | T | C |
| Osa07LNT0373900.1 | 7 | 9462521 | T | C |
| Osa07LNT0373900.1 | 7 | 9462566 | A | C |
| Osa07LNT0373900.1 | 7 | 9462681 | A | G |
| Osa07LNT0373900.1 | 7 | 9461315 | T | C |
| Osa07LNT0373900.1 | 7 | 9462790 | A | G |
| Osa07LNT0373900.1 | 7 | 9462821 | T | C |
| Osa07LNT0373900.1 | 7 | 9462829 | C | T |
| Osa07LNT0373900.1 | 7 | 9463062 | C | T |
| Osa07LNT0373900.1 | 7 | 9463167 | A | G |
| Osa07LNT0373900.1 | 7 | 9463189 | C | T |
| Osa07LNT0373900.1 | 7 | 9463766 | T | C |
| Osa07LNT0373900.1 | 7 | 9466063 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa07LNT0373900.1 | DTM_#DNAt_MULE_japo_Os1127 | Chr7 | - | 9464471 | 9464652 | 181 |
| Osa07LNT0373900.1 | DTM_#DNAt_MULE_japo_Os0037 | Chr7 | - | 9462276 | 9464191 | 1915 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0373900.1 | osa-miR5535 | Translation | 4.5 | 17.127 | 1 | 22 |
| Osa07LNT0373900.1 | osa-miR5797 | Translation | 4.0 | 13.801 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR5814 | Cleavage | 4.5 | 15.937 | 1 | 24 |
| Osa07LNT0373900.1 | osa-miR5815 | Cleavage | 5.0 | 22.216 | 1 | 24 |
| Osa07LNT0373900.1 | osa-miR5834 | Translation | 5.0 | 13.23 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR5836 | Translation | 5.0 | 12.155 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR166b-5p | Translation | 5.0 | 20.389 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR171b | Translation | 4.0 | 14.664 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR171c-3p | Translation | 4.0 | 14.664 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR171d-3p | Translation | 4.0 | 14.664 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR171e-3p | Translation | 4.0 | 14.664 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR171f-3p | Translation | 4.0 | 14.664 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR1423-5p | Cleavage | 3.5 | 19.992 | 1 | 24 |
| Osa07LNT0373900.1 | osa-miR1850.2 | Cleavage | 4.5 | 17.404 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR1846a-3p | Cleavage | 5.0 | 20.752 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR1846b-3p | Cleavage | 5.0 | 20.752 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR1861d | Cleavage | 4.5 | 21.791 | 1 | 22 |
| Osa07LNT0373900.1 | osa-miR1863c | Cleavage | 4.5 | 13.098 | 1 | 24 |
| Osa07LNT0373900.1 | osa-miR1862f | Cleavage | 4.5 | 17.699 | 1 | 20 |
| Osa07LNT0373900.1 | osa-miR1862g | Cleavage | 4.5 | 17.699 | 1 | 20 |
| Osa07LNT0373900.1 | osa-miR5076 | Cleavage | 2.5 | 12.657 | 1 | 22 |
| Osa07LNT0373900.1 | osa-miR5492 | Cleavage | 4.0 | 15.445 | 1 | 21 |
| Osa07LNT0373900.1 | osa-miR2875 | Translation | 4.5 | 12.298 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0373900.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0373900.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0373900.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0373900.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0373900.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0373900.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0373900.1 | 7 | Hd4 | Physiological trait | Flowering | nan | nan |
| Osa07LNT0373900.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0373900.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0373900.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0373900.1 | 7 | qSSP7 | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0373900.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)