© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0374100.1
GCCCCGATAGCCAAACCAGTTTACCCAGTATTCCAGTGCCATAGCATTTTTGGTTCCATGATGTTTAAGATTACAATTCAATCCAATCATTCCTTCAGTTTTCTAGATTCTTGTCATCAGATCTGATCCAGACCATATACCACTTAACGCATTAAACAAGCACATGGTGCACCATAGTTTGTTTCGAAGATGACACGAGGTGTAAAAAGCCTATTTCTGCCTCAAGACAGTTTACATGACCACGGCAACAGATCCTCTACAGTACTGCCATCTGACTTCGAGGGACTGATAATCTGATATATGAGCCCCACATCCAGCAGGCCCACATGCTAGTAACCCAGACAGAGGGCAGTACTACGTAGGAGACTCATCCCATGACCACCATTTCTACAAGGGACTTGCTGCATTACACTATACAACTGAAGCCCAATACTTGTAGTCTCTGAACGACTGAATCTTAAAACTCTCTATTCTGTACAACCTAATAAGCTAAGTATATACACTGGTGTATAGTCTATGGTGTTGTTTTAAGCAGTGTGTCTCGATTCTCAAGGGCCAGAAGGGAGATGTGCTGCAACCTGATCCTTAGGCATCAATTTGGTGTTTGTGTATTTCCAATTTAGCGCCAGGCTGAGGAGAGGGTTGAACTGAATCTCCCGATTCATCAGGCTGCATCTGTTGGATACCTCTATCTGGTGGAAGAGATAGACCACACCAGTCCAAGATATCTTTCTTAACCTGCCAACGGTTATTGGTAAAGTCAGCTATCTCCCAAATTTTGTTCTTCAGTTGCAACTTAGGGACACAAGGAAATTGCACACGCAATGACTCCACCAATTTGCCTATCCCATAAGGGCATGATGAAATAATTTTTACAAATTCTGGCAAGTCAGAGCCTGAAATTGATTTGGAGGCCACAGGTGTGCTAGGTCCCTTTCTGTTCAGTCGACCAATTTCCAGATCTTTAATGGGAAAATTAATGTCGACAGGAACATCAATGATGGGTGCCCCCAGGTATTCCTTCATACAGAGAGCTTGCAAACAGAGTTGCTCCACCTTAAGTATTCCAGTGATAGCTTCAGCATCCAATAGGTAAGCTTTCCCATGATCTAGGTTGTATATGACTAAAGGCCTGTCCTTCTTAAGAGCATGTTCAGTGAAGCTATGAAGAGCCTTCTGCTGTTGCAGAACAACATCAAGTTCCTCAATTGCAACCCTAGGAATGCTCAGTAACCTGCAGGTGTCATCTAATTTACCAGACAGAGGTTCAAATTGCACACCCTCATCCTCTGATAGATAATCATTAGGCACTACAAAACTGTTATCAGTTTCCTCTTCAGCATCATGTTTGGAATCCTTTTCACCCATAGCCTCTTCATCATCGTTATCAAAATCGGAGAGGTTTTCACCAGGCTCCTCCTCTTCCCATTCTTCGTCACTATCAACATCATAGTCCAAAAGGGGATCCACCTTAAAGGGGTGTCTTGCACTAACTGTAGAGCTCTTCATTGTCCAGGTACCATAGTATGCTGGTCTATGACTTTTGTCAAACTGTAAAAGCTTCTTTACACGCCAAACTGAAGAGGATGTGTTAGCATTAGTAGTTTTAGAGGTGTCAGCATTCTCATCATATGATTGGTCAAGTAATTTTGAGAAATTAAGGCTTCCTTGGTGTTCCATTTGAGATGACTGCTCTTTACTTGGAGTTGACACATATTCAGAAGGTGCAGTTGCAGGGCACTTTTGTAGCTTAAGCTCTTTAAATAACTCAATCTTAGGATTTTTCCTATCACTCCATCGGCATAATTCTTTCTGATGATAGAGTTTTCTCCATCTAGCAATCTGCAACTTCCAGATTTCATCCGATCTCAACTGATTTTCTTCAGACAATGTACAATCCATTGCTGATGTAGCTGAAGAATCCTCAATCTTGCTGAATACATTAGGATGTGGACTTCTCATTGAATGGTGATTGCCAAGGCTTTCCATGTTGCCACCCTTTTTACCTCTAAGAAAATGCTGCATGAAGTTTGCTTGTTTTTGAATGGAAGCTTGTCTTTTCAGTTCTGCTTGTTGCCTCTCTCTCCTTTTCTGTTCTCTTTCTACTTCTTCCTGATGCTTCTTTGATCGCTTCTTTTGTTCAGCCTTTTCTCTCTCAGCACGTTTTGCTTCTTTCTCAGCTTTTTCTTTGATATGCTTAAGTTCCTTTTCTTTCAGTTTTTGCTCCTTTTGAACTTGGTGATCTATCCTTTTCTGTTCCTTTGAAGCTTTCAAACTGCTTCTCTCTTTTGTTTTGGTATCCTTTTGAGCCATGTCGGATTTTAACTTCTCCACCAAAGAGCGAATACCATCAAGATTTAGTATATCCTGACTAGCATTTACAGATCCAGTGTTCTTCTGGTTGACATGTACTTTAGGAGTTCCTGAAATAGCCAGAATCCTTTCATGGATTAGCTTCCGAGCCGTACGTCTGATCTGCAAACTCCCACGAAGTTGTGAAGGCAGTAGCTTCAAATCTCGCGTCTCCCAACACCAAAGCTTTGATTTAGACTCATCCACCAACACCTGATCATGTATATCAGAAATCCCATATGACATTCTCTGACCAATGTTATTCACAGCGCTGCTAATGAAAGACTTTGTGACGCCATCTCGCAGCTCCATCCTCCTGTAGATTTCATCCACCAACTTATCATAGGGAAGACTGCTTTCCTCCAGCAAGCAAGCTACAATCGAGTCATTAGTAGAGCAGCCAATCTCCTCTGGCTTCAACTGATAACCAGAGACCTCCTTGTAATAATCAAACAATGCGTCAATCTCTCCCTGCAATCCAGCAGATGCAACTTCTTCATCCACCAGGGTCCTCTTCCTCTTTGGCTGCTTCTTGGAGACATCAGGAATCCGAGAAGCAGTTTCGCTGGCTAGACCATCCATAGCTGATTCTTTTGCTTCATCACCATCCATCTCCCAGCGCGTCCGGCGAACCAATCGCCCGGGCGGATCCTCCTAGATTGATCCCGATTTGCGCCCCCGCCGCCCCCCAACGCGCTCACGTTGCTCTACCTCGCCTCTGTTGTTGGCAAGAAGTGGGATACGAAGCGGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0374100.1 | 7 | 10130155 | C | G |
| Osa07LNT0374100.1 | 7 | 10128092 | T | A |
| Osa07LNT0374100.1 | 7 | 10128231 | A | C |
| Osa07LNT0374100.1 | 7 | 10128413 | T | C |
| Osa07LNT0374100.1 | 7 | 10128882 | A | G |
| Osa07LNT0374100.1 | 7 | 10128931 | G | A |
| Osa07LNT0374100.1 | 7 | 10129752 | A | G |
| Osa07LNT0374100.1 | 7 | 10129777 | C | A |
| Osa07LNT0374100.1 | 7 | 10129979 | G | A |
| Osa07LNT0374100.1 | 7 | 10130139 | C | T |
| Osa07LNT0374100.1 | 7 | 10130968 | T | C |
| Osa07LNT0374100.1 | 7 | 10128361 | G | A |
| Osa07LNT0374100.1 | 7 | 10130980 | G | T |
| Osa07LNT0374100.1 | 7 | 10131223 | A | T |
| Osa07LNT0374100.1 | 7 | 10131224 | A | T |
| Osa07LNT0374100.1 | 7 | 10131267 | T | C |
| Osa07LNT0374100.1 | 7 | 10132042 | A | G |
| Osa07LNT0374100.1 | 7 | 10132066 | A | G |
| Osa07LNT0374100.1 | 7 | 10133018 | G | A |
| Osa07LNT0374100.1 | 7 | 10133511 | T | C |
| Osa07LNT0374100.1 | 7 | 10134099 | C | T |
| Osa07LNT0374100.1 | 7 | 10134147 | A | G |
| Osa07LNT0374100.1 | 7 | 10134178 | A | G |
| Osa07LNT0374100.1 | 7 | 10134251 | A | C |
| Osa07LNT0374100.1 | 7 | 10134377 | T | C |
| Osa07LNT0374100.1 | 7 | 10134950 | T | A |
| Osa07LNT0374100.1 | 7 | 10135800 | T | G |
| Osa07LNT0374100.1 | 7 | 10135932 | G | A |
| Osa07LNT0374100.1 | 7 | 10135990 | C | T |
| Osa07LNT0374100.1 | 7 | 10136482 | T | G |
| Osa07LNT0374100.1 | 7 | 10136605 | G | T |
| Osa07LNT0374100.1 | 7 | 10136739 | A | G |
| Osa07LNT0374100.1 | 7 | 10136773 | T | C |
| Osa07LNT0374100.1 | 7 | 10136825 | G | A |
| Osa07LNT0374100.1 | 7 | 10136897 | A | G |
| Osa07LNT0374100.1 | 7 | 10136982 | T | C |
| Osa07LNT0374100.1 | 7 | 10131731 | C | T |
| Osa07LNT0374100.1 | 7 | 10131222 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0374100.1 | osa-miR5812 | Cleavage | 4.5 | 12.464 | 1 | 24 |
| Osa07LNT0374100.1 | osa-miR6250 | Translation | 4.5 | 9.787 | 1 | 22 |
| Osa07LNT0374100.1 | osa-miR1861o | Cleavage | 4.5 | 12.211 | 1 | 22 |
| Osa07LNT0374100.1 | osa-miR166b-5p | Cleavage | 4.5 | 9.553 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR395f | Cleavage | 5.0 | 13.505 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR395f | Cleavage | 5.0 | 11.772 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR396c-3p | Cleavage | 4.5 | 9.425 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR396c-3p | Cleavage | 5.0 | 6.569 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR396c-3p | Translation | 4.5 | 11.534 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR166g-5p | Cleavage | 5.0 | 16.861 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR810b.2 | Translation | 4.5 | 14.74 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR1856 | Cleavage | 5.0 | 10.144 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR1428b | Cleavage | 4.0 | 23.023 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR1428c | Cleavage | 4.0 | 23.023 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR1428d | Cleavage | 4.0 | 23.023 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR1428e-3p | Cleavage | 4.0 | 23.023 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR1861a | Cleavage | 4.5 | 12.211 | 1 | 22 |
| Osa07LNT0374100.1 | osa-miR1861d | Cleavage | 5.0 | 10.853 | 1 | 22 |
| Osa07LNT0374100.1 | osa-miR1861h | Cleavage | 4.0 | 10.853 | 1 | 22 |
| Osa07LNT0374100.1 | osa-miR1861j | Cleavage | 4.0 | 10.853 | 1 | 22 |
| Osa07LNT0374100.1 | osa-miR1320-3p | Cleavage | 5.0 | 9.917 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR2091-5p | Translation | 5.0 | 18.781 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR2865 | Translation | 4.5 | 16.701 | 1 | 22 |
| Osa07LNT0374100.1 | osa-miR2905 | Cleavage | 5.0 | 20.253 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR2877 | Cleavage | 4.0 | 18.256 | 1 | 24 |
| Osa07LNT0374100.1 | osa-miR3979-3p | Cleavage | 3.5 | 11.822 | 1 | 20 |
| Osa07LNT0374100.1 | osa-miR5492 | Cleavage | 3.0 | 4.404 | 1 | 21 |
| Osa07LNT0374100.1 | osa-miR2275c | Cleavage | 4.0 | 8.83 | 1 | 23 |
| Osa07LNT0374100.1 | osa-miR2275c | Cleavage | 4.5 | 20.395 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0374100.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0374100.1 | 7 | qSSP7 | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0374100.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0374100.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0374100.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374100.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0374100.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0374100.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0374100.1 | 7 | Hd4 | Physiological trait | Flowering | nan | nan |
| Osa07LNT0374100.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)