© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0374200.1
CGCTAGATAAAACATGCCAGATAAACTTCATCAACAACAGCCTTTTTACAACAAAAGGTCATAGGTTCAACAACAGGCTAACCCTAATATTAGTTCAACGCATAGCATTCTGTACTATTAGCCTACTTACATTCCAACATTGGCACATATACAACCAAAAGGACCTTAGGAGTATTCTAACATCGTCGTGAAACGTGCTTCCTTGCTGTCCCCTTTGTTAGAGCTACCTTCTTAGGAGTTTCTGCACTTGTGATATGGGTGTCTGCAAGAATAGAAGTCATCACATTGTTGCTGGGGCTAGGTGCTGTGGATGGCAATTGATGTGGTAGAGGTAGCACCATACATGGTAGTTCCCATTTGTTTGCCTAGTCTTGTCGATCGGTTATTGCAAACTGTAGCAAAGATATTCATTAGCCGTATGGTGTTTTTTAAAGCTTCTTCATGCATCTTGTTCTTAGCACGGTTCACAGATACCCTATAGTCATGATTAATGGCTGCATGCTCGTGGGCGTAGTTGGTTTTAGCCTTTTTTACCATCTCCATCTCTTGTGACGCATGAATCAGAAACCCATGTGTATTAGTTGAATGCAAAATTATAGTATTACTTACAAGGTTATGTTAATCACCTCAAAGGAGAAGCTTCCATCATCCAATTGCCTAACTAGATCAGCATAAGGTCCAAGACCAGCCATATTGACTGTTTCTTTATATGGCTCAAAAGCTTTAGCATAACAGTTGGCTTCTACATTCTTTAGCTTGCATTCATTTCATCTGATGTCACTAAGTAAGCAAAATACCCCAGCCAATAGACATCCATTTCCAGTACATCAGTTTCATCCCCTCACTATATGCCATAGTATATGAGTAACATAGTACAGTACAATTTATACTTTAAATCCTTGCCATGTGTGATAAAAGATAGCATTTGTGCAGCATAGGGTAGGCTCAAGATGTAGTCCGAGTGACTTCAGTGCAGCCATAAAATACCTCAGTCCTGTGATTGAGGAGCGTTGGATCTTTACCCTTTTTGGAATGCAAATACCGTAAAATATCTCTCTTCTTAATATGTCCGCAGATCTCCTGTGTATTCGAGAAAAACAACATTCTATACGTACTACTGCAGTGAACTCCAAGATATTAAGGCCCAAAAAGATACTCATATAGCTGAGGCCCTGTAGATAGCTAAGCATACAAGTAGTGGAACACCGAAGCAGTAGATAGGTGCATCCATGAATGGATTAGCCTCGTATGCCCTAACGATAGCCCTACAATGCTTCCAATGTCTCCATGCAATTGGCAGACAAAGAAGTATAAGAAACCTTCTAAAGCAACGGAATATCCAAACATGATGTATGCATTTTCTTTCCTCATAGTGATCATCATCCTTCTTTGCCTTGTGGGAGATGTGGACCAAATATGCTGCCCTATTTGCTGCTATGGCTGCTATAATGAGAAACGCAGGCAAAACCACAAATAGAAGATGAGGAAGAACAATAACCATCACATCAGGCAGACCAATATATGGCGCTGCTGTACTCAGATTGGCTAGATTACTAGTGCTCCAACCTTTGTAATAAAGATACATTTTATTGTGATTTTCTGTAACAGCGTTGCCAGCAAACCATGGGAAGAAGACCAGATATAACAAATATATCAACATCCCAGACCATACAGAATACATCTTTGACAGCTCAGCAGCAAAATATTCAAAACTGATCAGCAGATGGCGTCCTGAACTACCTGCAGCCGTCTTCGAACTACGGCATTTCAACATGTGGTTCTCATATAACATGAGCAATGTGCGAGGAATAAGAATCAGCAAACAAAGAAATGCAAGCGTAGACCACATAATTGGTTGATATAGCTGACCCCACTGACAACCCATCACACGGAACTCCTTCCAAGTCCACCTAACTTTTGCAGTTAAACCATTCACAGAAAATGGCCTCAGTTGGCTATAATATATCTTCCCGGTCAAATCCTTTGCTTCTATCTGGAGCCAGTACCGATCTGGCGATTCATCTACATATGCTTTCCAGTTCCATGGGACTGTATACATAGCACCTCTTGCTCCCTCACCACTAGTCATTTCCATGTCTTTTTCCAATACTAGATGATGGCTACCAGAAAATGAATCGTATATTTTTACTGAGACAGCTATAATCTTATATTTTGAGAAGACTAGTGTTCTTACCATCCCAAAATGACTGGTGCTATTTGCTTGGCAGTTCAAATCATGAATTGTCAAAGTTTCAGTACACACATGCATCTATTAGCAGCTTGATCAATTAATAGAAATTAGATTGCATATAGTGATTATTGGACATTATATATTTATTGGTGAGAGACTAATTTTGGTCTACTCTTGTTTGGCACCGTGAAAGATCAAGGCATAAATCCAGACATCGTCGCTGTGTCCTCATCTCAACTATTTTGTTGATTGGTTGTGACTATTTGACTATATCTTCCCAATGTAGTTGGCTAAGACAAATTCTACTTGTAAATAATTGATTGTGCCCTAAATCCATCTCCATAAATTTTTGTTAAGTTTGGCCTTATGGATGTAGCATTATATATAGGCTGCAATTTGATTTCTCTTGTCTTAATTGTGCAGTTTTGTGCAGACACCCATATCACAAGTGCAGAAACTCCTAAGAAGGTAGCTCTAACAAAGCGGACAGCAAAGAAGCACGTTTCACGACGATATTAGAATACTCCTAAGGTCCTTTTGGTTGTATATGTGCCAATGTTGGAATGTAAAAAGGCTAATAGTACAGAATGCTATGCGTTGAACTAATATTAGGGTTAGCCTGTTGTTGAACCTATGACCTTTTGTTGTAAAAAGGCTGTTGTTGATGAAGTTTATCTGGCATATTTTATCTAGCGGGTATATGATATGGGTGTTTGTGAGCATGCTCACCATGATCATGTCAGGCTACCTGTGTTGGTATGTTGTTGGTTAACTTGACATAGCATGTTCAATTGGAAGCAAGTATCATAAATTCATAAAATGTATAATTTAAATTGATGCTAACCTTGGGTGATATTTTAACCGGTCATGTTTTTGAATCACAATATAAATCTCTTGCTGAAAACAAAATATAATTTTCAACAGAATTAAGGTATGGGTTTTTACGTGTTCGTTGGAACAAAACATAAATGTAGAAAAAATTCACATAATTAGGCCAGTAACGTGTTATAACAACACAATGTAAATCTAGAGAAATCTACGCAAAAGGGAACATCAAAGAACACCGCGGTAAACGACTTAACTCGAATACAACATAAATCTTCAAGAAACGACGCAAAAGAGACGCTGATACCGTTAATGCCTCGAATACAACGTAAATCTTCAAGAAACCACGCAAAAGAGACGCTGATACCGTGTAGATGTTAATACGTATTGTTATACCTACGCGGTACATATTATAATTTGGAGGACAGTTCTACCCTTTTGTCAAGGGCGTTCTTGCCCAAGGTTGCAGGACCCCGACTACGTAGCTCGTAGTCTCAGTCCGTGGTAACTGGCGGGGTTATGCCCCCTCGCCGATCTTCGCTGGTCGGGTTATTCCCCCTGGCCGGCGGCTTGAGAGAGAGATGGGAGAGAATTGGTTTAATCTTGCTTAGCCTGATCAATCACGATTACAAGGCTTAATAGCCTGCTCCTCCAACTGAAAGGGAAACTAATCTCCTAAAGTTTAGGACTGCAACAGACTCCTACCAAACTGGGCTCTATTAGCCACTAATTACGCCTGCTTCCCTGGCTGCGCTCTCGGCGCGCTCAGCGGCCCTGCGCAGGTCGCGCGCTCGGCGCCTCCGCGTATAGGTGCGGCCCCACATGACATCTCTCCCCTCCTCGAGACGCAGCTCGTCCTCGAGCTGGAAGTGTGGGTACCTGGCCGTGAATGGGTCGACGTCTTCCCAGGTGGCTGATGCAGGCGATGAACCTTTCCACTGGATGAGGACTTGGCGCACCCCGCGAGCCAAGCGTGTCTTGACGGCTTGTTCTGGTTCGGGCACCACAGCGCCATGGCGGACTGGAGGCAGGGGCGGCGAAGCCGGCGGTGGCGCGCCGTGGAACTTCTTGAGGAGGCCCACATGGAACACGTCGTGGAGGCGAGCTTGGGGCGGCAGGTCAAGGCGGACAGCAACCTCGTTGATGAGCTCGACGACGCGGTAAGGACCGTAGAACTTGGGCTTCAGCTTGCCTGTCACCGCTGTGGGCAGGGAGGCAGTCGGCCGCTGCCTGAGCCGTAGGAGCGCCCAATCGCCCACCTGATAGGAGACTTGACGATGAGCTTGATCGTAGTGGCGCTTCTGAACCACCTGCGCCTGCTCGAGGCGGTGGCGGATGTCTTCGAGGAACTCAGCGCGTTCCGCCATGGTCTGCGCCACCGCAGCGACCCGAGTCTCGCCCGCCTCGTAGGAGCGGAGGGAGGGGGGATCCCGGCCGTAGACGACGCGGAACGGCGTGTCGCGCAGGGACGACTGGAAGGCGGTGTTGAAGACGTACTCAGCCCACGGCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0374200.1 | 7 | 10180581 | T | C |
| Osa07LNT0374200.1 | 7 | 10180667 | G | C |
| Osa07LNT0374200.1 | 7 | 10186311 | T | C |
| Osa07LNT0374200.1 | 7 | 10188603 | A | C |
| Osa07LNT0374200.1 | 7 | 10188651 | A | G |
| Osa07LNT0374200.1 | 7 | 10188931 | T | C |
| Osa07LNT0374200.1 | 7 | 10188957 | C | T |
| Osa07LNT0374200.1 | 7 | 10189577 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0374200.1 | osa-miR1319b | Translation | 5.0 | 19.787 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR5179 | Cleavage | 5.0 | 11.72 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR1440b | Translation | 4.5 | 12.823 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR1440b | Translation | 4.5 | 15.715 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR166b-5p | Translation | 4.0 | 13.704 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR166d-5p | Translation | 3.5 | 13.704 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR399d | Cleavage | 3.5 | 18.176 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR399e | Cleavage | 4.5 | 18.176 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR399f | Cleavage | 4.5 | 18.176 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR399g | Cleavage | 4.5 | 18.176 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR399h | Cleavage | 4.5 | 18.176 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR399j | Cleavage | 3.5 | 18.176 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR167e-3p | Cleavage | 5.0 | 16.744 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR167i-3p | Cleavage | 5.0 | 16.744 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR443 | Translation | 3.0 | 14.124 | 1 | 22 |
| Osa07LNT0374200.1 | osa-miR444a-3p.1 | Cleavage | 2.5 | 23.756 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR444b.1 | Cleavage | 4.0 | 23.735 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR444c.1 | Cleavage | 4.0 | 23.735 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR444d.1 | Cleavage | 2.5 | 23.756 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR1862a | Cleavage | 5.0 | 20.884 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1862b | Cleavage | 5.0 | 20.884 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1862c | Cleavage | 5.0 | 20.884 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1869 | Translation | 5.0 | 14.87 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1877 | Translation | 5.0 | 14.602 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882a | Translation | 5.0 | 14.476 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882b | Translation | 5.0 | 14.476 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882c | Translation | 5.0 | 14.476 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882d | Translation | 5.0 | 14.476 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882e-5p | Translation | 5.0 | 14.476 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882e-3p | Cleavage | 5.0 | 13.286 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882f | Translation | 5.0 | 14.476 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882g | Translation | 5.0 | 14.476 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR1882h | Translation | 5.0 | 14.476 | 1 | 24 |
| Osa07LNT0374200.1 | osa-miR2095-3p | Cleavage | 5.0 | 19.777 | 1 | 20 |
| Osa07LNT0374200.1 | osa-miR2100-5p | Translation | 4.5 | 16.527 | 1 | 22 |
| Osa07LNT0374200.1 | osa-miR2876-5p | Cleavage | 4.0 | 17.829 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR2929 | Cleavage | 5.0 | 17.483 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR5494 | Cleavage | 5.0 | 11.476 | 1 | 21 |
| Osa07LNT0374200.1 | osa-miR2275d | Cleavage | 3.5 | 10.239 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0374200.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374200.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0374200.1 | 7 | Hd4 | Physiological trait | Flowering | nan | nan |
| Osa07LNT0374200.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0374200.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0374200.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0374200.1 | 7 | qSSP7 | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0374200.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0374200.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374200.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0374200.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374200.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)