© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0374500.1
CCGACCTCTCCCACCTCTCCTCTTGCTTGTGGATGGCTATCCTCCCACCGGATCTGAACATCCCTAGCTTGGAGGCTCATGATCTAGCCACCAAATCCCGCCACCGCAGGAGGCCGCCCTAGCCACTGCCATGAAGTGGAGCGGCTGCTTCGACCTTACCCCCGACAAGGCGCGATGGTAGCGGCAATAGCCATGGAGCTCGAAAGGTGCCACCTCCACGCTGACGGAAGCGGCTTTCCCTTCCCAGTCATTGGAGCGCAATGGAGCTCAACATGCTAAAATCTCAGGACGCCTTTGGGACTATGCTCTGTCATTTATGATTCAAGGTGAAACCGGGTGATTCTCCGAGGACAAGATTGCTGATTTTAGTGAAATATTCAAGGCAATAGAATGCAAAAATATTCAAGGAATGCCGATCTCCCTCCCCACTCGTTTCCTCCACAAATTGAATGCAAAAATAGGTTCCTATCCTCCTCCTCATCAATTCCCCCACGTTTTGCCCTCTTAATTCGTCCTTTAATCATCAAATTTAGTCTCCAATGAACTGCCGCCATTGATGGCAGCCCGGCGAACTCTCCGGCCGTTCTCCTCCTCTCCCCGGCCATCCGCCTCCTCCACCCCGGCCTATAAAAAGGAGTACCGACCCCCCCCTCTCTCCCCACACTGCAGCCCTCCCCCTCCTCTCTCCCTAGCTGCCGCGTTGCCTTCTTCTCGTGTCGTCGCTGCTGTGCAACTCCGGCCGCCCCTCGCCGACAGTTGGGACCTCCTCGGAGCCCAGCATCGCCACCATCCGCTTCGCAGCAACCTCCTCTTCCCCAGCCTCGCCTCCGTTTCTCCTGGAGACCGCCGGAAGCTCGTCCTCGCTGGTGAGCAGTGGTGACGTCGCCTTCATCCTCGTCCTCCGGCAGCCCTCCCTCCTCGCTGGAGGATTGCCTCACTGCGCTGTCAATGCTGTTGGCGTCATCTCGTTGTCTTCATCATCGGTCGTGCCTCCTCGCTGCCCAAAGACTCCCGTAGCGCCGCCCCGTTGCTATTGCCTCCCTCCTGTCGTCGTTCCCGTCAAGACGAAGTGCCGCCTGTCGTCGGTGTCAAGTCCGCAGCGCCAAGCCCGTCGTTGTCCGCCTTTTCACCAAGCTCGAGGATTGCTGGAGCCGTCCCCTCGTCGTTGACCCGTTCCTCTCTGTCGCCCTTCGTCGCCGCGCCAAGGTTTTCGCCGGTCGCCACCGTTGTTCCCTTGCCGCGTTGTGTCCATGGTGAGAACCTCTTCCGTCGCTACCCTATCCTCGTCCTCCCCGTGTGGTCGCCGCGTGGATTGCCCACGTGTGCAGCTCACGTGGTAGTCCCGGCTGCCAATCGCTCGATCCTTTCTTTCTTCGAGCGATATTTCATTGCACATAATTTAATAGTATAATAATAATAATAATTAAACAACTCGAAAATATCCACTTTAATTGCACTTAAAATTCGGATGGTCGTTTCTCGGCCATACGAGCTCCTAATTGACCCGTCGAAATTGTTTAATTTTTGTTATAGCTTGAAGAACCCGTGTTTGTTATTTTTATATGTTGTTATCGTTTCTTTCTTAGATTTGTAGCCCTGTTTTGTTGATCGTGTAGCTGTCGTCATTTCGGAAGTTTCTGAAGTGCAGATCAAGTCATCTAAAGACCTTCTCTTTGAGCAAGGCAAGTCATGCCATATTCCTTGAACATAGTGAATCCCATTATTGCAAAAACTACGTTGTTTCACTTCTATATGAATCGCTTTTATAAATTATATGACGCTCACTATTATTTATTTAATAGTTAATATTCATATGATCCTTGTTATATAGCCATGTTATTGAATTGCTACCCATGCTCTTGACAACCTTAGTAAAATGATAAAATGACTAGTATGGCTCCCTATATGATGGACTTATTAGTTGCTTTAGGTTGGGCTTATATACGCTTAGATCAAACATAGAATCTCTTTTTATACATTAACCTGTGGGTAACAACTAAAATATGTGAGAATGATGATTAGGTGGCTGGTTGAGCCTGGACATGATGGAATCTCATTCAAAACTCTCTAAACCTATTTTTGGTGGGGCGTGAGGTGCATGGTTTTGTTAGAAGCACCTCGGCCACTGTAAGGACCGGTCTTCGGACCTCTGTTGCGAAGCATAACAGTGCAACCACAAGTCTAATGGGTAAAGCCTGACTAGAAGTCCAGATCATCTCAAAACAAAGGCCATCGGTATGATAGGTTTGGGGCCAGGGAAGGCTGACTTTGACCTGGCGCAAGAGGGGGCTTATCTCGTCCCGGGGGATCCAGCAACCTTTACCTTGTCGGGGACCAGCGGGTGGCGAAACCTTAGCGGGTCCTTCTGTTTTGGGTTGAGCTAGGAGGATAGTCTTGACATGATCTTGACTTTTCGGGTTCCTTTGAGGTATCGCGATACATGGTTGACATGAAATCAAGTATTGTGTCTTGTGGGTAAAGATGTACACCTCTGATCAGAGTAAAACTATTCGAATAGCCACGCCCTCGGTTATGGGCAAGCCTAGCAATGTACCAAAGTTAGTGTTTTTCTTCTAAGTGATGGATGGAAATCATGGCACTTTGGACAGGCGGTTAACCTGGGTTTAAGGCCGGTATGCGTGGGTTCGTAACCATGATAATATTGTTTAGATATAGGAACGAGTTTAAACTATGCTTTAAAACATTAAAATATTGCAACTTTGGCTTTACGCAAAAATGAACCCTATTATGCCAACTCTTTGTTCCCTTTGCATTATAATTCATTTCCCGGCATAGCTCACTTGAGTACGGTGGTTGTACTCATTTTCTTGCTCAATCTTTCCCTCTCCAGTCAGAAGCTTCTTGAAGAAGAAGTCTTAGGTAGAGTCTTGGCTTATACCCCAGTTGAGCACCTGTGAAGATGGAGCCGTAGGCCCGCTAGTCCGCTGTTGTTTTTCTTTTGTTGTCAGGCTTAATGTGCCTTTGTAATAATGTAAATATTATCGTGATAATTAATAAAGATGTGTCTTTTGTATCAAGTTGTTGTGGTGTACCCTGGCTTTTCCTGGGACGGGGATTAATACACTAGCGGTCGGGAAAGGTATTTTCTGGGCGTGACACCATTAAAAATCCACTGCAATAGTTTGATCTAACCAATGAAACATCCATATGCATAGACCGAAACATCAAAAATTAAAAAAAAAACATTCTAGACATACCTCTTCTTTCTCTCATATGGTTGGCCACCGCGTCAGCACCGGATGCTGCCCTAGCTGTGGAGGGGACATCGTTAGCGATGGCGTGCAGCTGCCGGGGATGGCGCTGTGGACAGTGATGTCGTACGACCCCCACCCGCTCTAGCATCCACTCTACACACATCGCCATCAATGCGTAGAACTTAACCATATCTGTGTCACTGCTGCCTCCGCGGAGAGTTCAGCGTGTCCATGTCGCCGCCGCTGTGGAGATATTCGTGTCGCCGCCGTCATTGTGGACAACTCGTCCATGTCTTCATCATCACTGCCGTGAGATCTTGGCCATTATCCACGCTGTTGCAGCTATGCACCGCCGCAGCCTTGCTCTCTTACTAGTGCTATGAGTTTCTCGTGCATCAGCCACCTCCATGGCTCTATCAGGGTAGGGGAAGAGAGGGACGGATAGAGAGAGAGAGAGAGAAAGAAAAGCGAGAGGAGTTGATAAGAATGGCTCTATCACGGTGGGGGGAAGGGAAGCAAAGGAGTGGATAAGAAGTGAGTTGCCAGCGTGCATCCGGTATATTGTTTTCCTCCGAACTACCGAGACGAAGCCTTTTCGGAAAATTTAACTCGCTTCTTTAGATGCCATGTTATTCTTCATAATTCCTTTTTTTTCTACTAGAGCCTCATGAATGTCCATTGTGCCCCTCTTCACCCCGTTAACTCTCTTTGACATGACGAGATACTAGCGATGGAGGAGAAACTATTTGAGCTCGCAGACACCGTTCACAAGTATGATGACGCACGTAGCAATGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0374500.1 | 7 | 10933153 | A | G |
| Osa07LNT0374500.1 | 7 | 10929862 | A | C |
| Osa07LNT0374500.1 | 7 | 10930855 | T | G |
| Osa07LNT0374500.1 | 7 | 10931425 | C | T |
| Osa07LNT0374500.1 | 7 | 10931672 | T | C |
| Osa07LNT0374500.1 | 7 | 10931816 | T | C |
| Osa07LNT0374500.1 | 7 | 10932251 | T | C |
| Osa07LNT0374500.1 | 7 | 10932598 | T | C |
| Osa07LNT0374500.1 | 7 | 10932721 | A | G |
| Osa07LNT0374500.1 | 7 | 10932907 | T | C |
| Osa07LNT0374500.1 | 7 | 10933273 | G | C |
| Osa07LNT0374500.1 | 7 | 10933745 | A | C |
| Osa07LNT0374500.1 | 7 | 10933977 | T | A |
| Osa07LNT0374500.1 | 7 | 10934274 | A | G |
| Osa07LNT0374500.1 | 7 | 10929420 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0374500.1 | osa-miR5534b | Cleavage | 4.0 | 6.485 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR5792 | Cleavage | 5.0 | 23.342 | 1 | 24 |
| Osa07LNT0374500.1 | osa-miR5807 | Cleavage | 4.5 | 13.121 | 1 | 24 |
| Osa07LNT0374500.1 | osa-miR5819 | Cleavage | 4.5 | 20.746 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR5820 | Cleavage | 5.0 | 17.395 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR156b-3p | Cleavage | 4.0 | 12.962 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR156k | Cleavage | 4.0 | 17.249 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR319a-5p | Cleavage | 4.0 | 17.725 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR160f-3p | Translation | 5.0 | 21.787 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR166j-5p | Translation | 5.0 | 11.799 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR418 | Cleavage | 4.5 | 5.249 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR437 | Translation | 3.5 | 11.54 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR535-5p | Cleavage | 5.0 | 17.847 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR529b | Translation | 5.0 | 16.183 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR529b | Cleavage | 5.0 | 17.199 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR1438 | Cleavage | 4.5 | 16.928 | 1 | 22 |
| Osa07LNT0374500.1 | osa-miR1850.2 | Translation | 4.5 | 16.338 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR1857-3p | Translation | 5.0 | 20.91 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR1861h | Cleavage | 5.0 | 16.163 | 1 | 22 |
| Osa07LNT0374500.1 | osa-miR1861j | Cleavage | 5.0 | 16.163 | 1 | 22 |
| Osa07LNT0374500.1 | osa-miR1862e | Translation | 5.0 | 5.801 | 1 | 24 |
| Osa07LNT0374500.1 | osa-miR2092-5p | Translation | 5.0 | 13.438 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR2093-5p | Translation | 5.0 | 19.996 | 1 | 20 |
| Osa07LNT0374500.1 | osa-miR2101-3p | Translation | 5.0 | 14.862 | 1 | 22 |
| Osa07LNT0374500.1 | osa-miR2104 | Cleavage | 4.0 | 12.198 | 1 | 22 |
| Osa07LNT0374500.1 | osa-miR2104 | Translation | 5.0 | 15.416 | 1 | 22 |
| Osa07LNT0374500.1 | osa-miR2876-3p | Cleavage | 5.0 | 14.659 | 1 | 21 |
| Osa07LNT0374500.1 | osa-miR2923 | Translation | 5.0 | 7.714 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0374500.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374500.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0374500.1 | 7 | Hd4 | Physiological trait | Flowering | nan | nan |
| Osa07LNT0374500.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0374500.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0374500.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0374500.1 | 7 | qSSP7 | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0374500.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0374500.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0374500.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374500.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0374500.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)