© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0375100.1
AAAAAAAACGTTGCAGGATTGTTATAAAGATGTACAGTTTGTATCACAACTAAGAAGGGTACACAGAGACAGCGTTACATCACGGTCATCTTAGACTATGTTCACTCACGTTTACAACCGAAACAATGCAACTCCGATAAGCTAATGAATCCAGCAATGTTTCAAAACCTCCTCTGCTTCTGCTCCGTTAGGAGCTGCCACAAATTTAAGGCTGGACAGCTTCTAGGAGCTTCTCATACACTTGCCGTGCTGACAAATCTTCAACAATCAGAAGCTTCGACTTATTATTCCATCCTCTTTGAAGGGTCATCTGACTGAGTCTTAAGCCAAGAACCTTGCCCATGAACTCTAGTAGTTCGTTGTTTGCTTCCCCTCGAGCAGCAGGAGCAGCAACTGTTACTCGAACATCATCAGCATTCACTCTTGTTATTGCTGACCGTTGTGCCCGGTCTTCAACCTCAATGGCTACTTGGACAAGGCCACCTTCCAATTGTGTGATGCAAGGTGGTACAGGTGCATCATGTGGATTTGTTTCAGCCGCCACTGAGCTTAGTGCTCCATCAACAACATATATGAATGGAGCTAGCTCCAACTCCTCTTCTGATCGGTAACAAACGAAAAGGCCGCATCCCAAACAACTCATACGGAACTGCTTTTCAAGCTTCCCTTCTCCCCTGCATACATTAGAGAATCATCAAAGTTTGGAGTGCAACCTAGTAATTATATTAACCAAAATGATCCAGATATGGCATATAAGAATTGTAAATGGTGATGAAAATTGTAAATGGTGATGACAAAACAGAATGCCTATAAAAGTTTAGAAGTTAAGAAATTAATGAAGGGAGAATGTGTGCAACAAAATCTATTGTTATGGTGTTAAGTCAGGCAAAACTGTGCACAGACACACTGTGTTAAGAAGCAGTACTGTGCTTTCTTCTAGAAAAGAACTTGTAGCACTGAATTTTGCAGTTCATAATACCTGATAATTGGATGAGTAATCACCAGGAGTTGAACTCAATATGAAGAAGATTACAATCACGGTACACATAACATAAGATCTGTTGGTGGCAGCCTGAGCTCAAAAGCCTGGAAGCAGAGGCATGGTACAGGCCATGTAGAACCCAGCCAGAGTGACACTAGATCTATTGAGAAGCGATCGCTGCCATGGCATAGTCAATATACAGACAGGTTCAGCTCATCAGCATTATCTCTTGTGGTAGGATGGGACCAAGCTAATCCAGAGTTCCAGACGTTTTTTCTTCTCCTTTATTTTTTGAGGCAAAGGATGTTATTCTAGTATTTGGTATGTTTTAAACTGTATTGTGTATTCTAAATTTTAACTTTCTCTACCGAAAAATGTGATTTTGCTTTTCTATTCTTCACTCGAGTACAATCTCCAACAATCCTCACAAACTAAGGCCAGGAATATTTATCAGAAGTTCAGGTCCATCTCAGGCATGTCCCAGGTAACCAACCAAACAGCCACTTAATATCTATAAATAATGCAAGAATATCTAAGAAACTGAATGGTGTTTTCCTCTAAGACTAAGAAAAGATTCATAGGATGACTAATATACCGTTTCAACAGGACCTTTCCTGCCTCCTTCACATTTAGCCTTGAGAGATGTTTTTTCTTGTCTAGTACATGTGCTCTGTCAGTCTTCCTCTTTGGCATTTTCTGCAATTGGGTATCTTTAGAATAAACACATCAGAATGGGGAAATTTCCAGACAGTTACAGTCTCAACAATAGATACTAAATACAAAATCATGTTCCTTAAACTTAAAAAATGGTGAGCATTATATAGCACGGCAATTAATTTTGTGATCCCAAATATCCTTTGGCAGGTTAGCAACTAAATAGAATGACTCAATATGTCATAAAGCACAATCCCTCCAGTTGAAGATAGAGTTGCAACAGTTACAAATGGCATTCATATAACAAGGTGGTAGGCTTGCAGATAGTAGCTTTGGCTAATTCTCTAAGAAACGAAAATCAGGAAACAGAACCCAAATCCACCACATTGTTGTTGGCATGATTGAAGGATTAGATTCAACTTCTGAGTCAGTTATTGAGCTGAATCAAAAGGAATAGATAAAAGATATGAAGAGCCTAATAACTTAACATGGTTGTTCCCCGGACATCTAGTGTAGTTAATTCCAAAGAGGTTTTAGCCCATTTACCAAACAGGGTTCAAATGAAATTCGAAAATTTTTCTGGTGGATTAGAGCTGCCAAAAAACAAGAATTATCATAGACTACCAAGTATGCTGCTGACCTAGCAGAACTGAAGCACTATAATTGGTCCCATGTAACCTACTTGCTATCAATTAGATCATTATGTCGTGCAAAACAGACCTAATTTCACTTGTTTACGTAACAATCATCTTCAAATGGCATATCTTTAGGATTAGGGCTCAGATTCCAGTCAATAGCATAACAGCAAAATCTACCCAAATCACTAACCAAAGGAAGAATACAATACGCAGTCACCCTTGCAAACACTCTGCATCTCTAAAGTTTTTTGGTTTAATTCTGGACAAGTTTCATGAAATGGAGATTAACATAAGACATTCAGATTGAACAAAAGTTCACAAGCAAGGCCTAGGGTAAAAGACAAAATAACCACTAACATCAATGAATAATTCCTTCGTAGAAATAGGAGACTAATCTACATGGATAGCCCAGCCTCTGGTTTTCTGACTCCCACATTCTGTTGTACAAAACAATACCAACACACCATGCAGAACACTAAAAACTGATTCTGGTGAGCTCGGATAAATGCACTACTGTATGTGGGCCTATATCACAAGTTTGCTACAGAAACAGGTCTACAGTTCTTATCAAACAACAATTGGTATGCATACATAACAATTTTATTTGATCCCAAAATGGTAGGTGGTTTCAAGTATACTTGTAAACAACATATACTATATGCAGAGAAACAAGACCAGATTTGTTCGTTCATCGTTGTAATATAAGCAAGCGTGAAAATCTGCAAGCTAGAACCCACACAAAGAACATGAATTCTCTAGAAGGTGAAATCCTATGCTCGCTGTGCCTGTGCTGCTCATGCTTGTGAGTAATTCGCAATGATTAGATCAAAACTACACCTAAAGATTTCCCACTGAATGCTGAGCTGTATACTAGTGTAACATAGAACTAATCCAGAAGAGTAACACGGATCTGGTAAAATTTAGCAACCTGAGCTCTTGGGCGAACAAGAAGGGGAATTCCCCAAAAGGGGAAACGAACAGGAGGGAGGGGGAAAGAAGCTGACCGGTGATGAGGACGTGGGAGGCGCAGTGCTTGCAGTAGTAGACGAAGAGGTCGGACTCGGGCCCCTCCGGCAGGGCGTCCTCGCTGGAGTACGTGTGCGTCGTCCGCTTCGGCATCCTCCTCTCCGCTCAGCTTGCTGCGCCGGCGGGGAATATGCCCCCGACAGAGGTATAGCACGGCTGCTCAGGCGGGCGCACCGTCGAGGAGGGATCCGCGTCGCCGGCGATGGGTGGGGGGCGGGGCGGGGCGTGCGGTGGGAGACGACGGCTGTAGCAGCGGCGGCGAGGTTGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0375100.1 | 7 | 11516943 | A | C |
| Osa07LNT0375100.1 | 7 | 11514765 | T | C |
| Osa07LNT0375100.1 | 7 | 11514878 | G | A |
| Osa07LNT0375100.1 | 7 | 11515213 | T | C |
| Osa07LNT0375100.1 | 7 | 11515314 | C | T |
| Osa07LNT0375100.1 | 7 | 11515725 | G | A |
| Osa07LNT0375100.1 | 7 | 11515917 | G | A |
| Osa07LNT0375100.1 | 7 | 11516265 | T | C |
| Osa07LNT0375100.1 | 7 | 11516698 | A | G |
| Osa07LNT0375100.1 | 7 | 11517827 | G | A |
| Osa07LNT0375100.1 | 7 | 11514956 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0375100.1 | osa-miR166a-5p | Cleavage | 4.5 | 17.905 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR166c-5p | Cleavage | 4.5 | 17.905 | 1 | 20 |
| Osa07LNT0375100.1 | osa-miR166e-5p | Cleavage | 4.5 | 17.905 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR399e | Translation | 4.0 | 12.58 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR399f | Translation | 4.0 | 12.58 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR399g | Translation | 4.0 | 12.58 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR399h | Translation | 5.0 | 12.58 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR399k | Translation | 4.0 | 12.58 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR415 | Cleavage | 4.0 | 21.138 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR419 | Cleavage | 5.0 | 16.109 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR435 | Cleavage | 5.0 | 15.813 | 1 | 20 |
| Osa07LNT0375100.1 | osa-miR529b | Translation | 4.5 | 16.261 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR1429-3p | Translation | 5.0 | 17.974 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR1320-3p | Cleavage | 5.0 | 13.336 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR2099-3p | Cleavage | 5.0 | 11.618 | 1 | 20 |
| Osa07LNT0375100.1 | osa-miR2868 | Cleavage | 4.5 | 12.459 | 1 | 20 |
| Osa07LNT0375100.1 | osa-miR3979-3p | Cleavage | 4.5 | 13.117 | 1 | 20 |
| Osa07LNT0375100.1 | osa-miR5148a | Cleavage | 5.0 | 11.555 | 1 | 24 |
| Osa07LNT0375100.1 | osa-miR5148b | Cleavage | 5.0 | 11.555 | 1 | 24 |
| Osa07LNT0375100.1 | osa-miR5148c | Cleavage | 5.0 | 11.555 | 1 | 24 |
| Osa07LNT0375100.1 | osa-miR5337a | Cleavage | 4.0 | 11.154 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR5509 | Translation | 3.5 | 8.314 | 1 | 21 |
| Osa07LNT0375100.1 | osa-miR5337a | Cleavage | 5.0 | 17.364 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0375100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0375100.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0375100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0375100.1 | 7 | rn7a | Resistance or Tolerance | Drought tolerance | C39 | RM214 |
| Osa07LNT0375100.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0375100.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0375100.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0375100.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0375100.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0375100.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0375100.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)