© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0375200.1
GGCTTAAAGCATATATTGTTACAAATATATTACAAACACGCCAATTGGGGTAGAAAAGAACCACATAACTCAATATAAAATGGCAGTTTTAATTTTTGTTTTTCCTAAATAAACATATTTACAATCTTTCCACATCGCAGTACAAAAGTTTATAAGTGATAAGTTGAGAAAAATGTTGTGAAGGCTGTAATGTCTGCCCAACTTGGGAAGAGACTCTTCAGTTTCCTTGTACGATCAAGGAGATACTGGTCAAGTACAGCTACATCGATTCTCAAAGGTTCAGAAGAGTTCGCCTCCAACCAGAAAGACCAATTCTCGTGGCTTTCTCCACTAAGTCTGCATATATATGATGGTGGCCCGCCACTAAAACTTTGAGGATCTGGAAGTGTCATATCAGAAAAGGACCAATTTGATAGTGGTCCAGTAATATTAAGCACAGAGGTCCAAATCTCCGATAATGAACCAAGTGAAAGCTCAAGATGCATCCTCCGGTGCCCATTATTACTCGAGGTCTTCTGAATAACCATCTGGGGGAAATGCTGGTAATGTTTTCTAATCTCTTCATTTTCTGAAGGAAACTTTAAGCTCCCAGAGAACAAGAAATTGACAGGATATAGTGCCAACCATGAACTTCTGTCGGAGTGATACTTTTCTTCAAAAGATAATAGTGAGTTATCCTTCAGCCATTTTGCTGCCTCAGGCGCATTATTGAAAAGAAACTCCAATGAATTAGCATCAACCACAGAGAAACCATAGTGTGACTCCACAATACTATTAGCATCTGTAACAAAGGTGTGTTGAAGAACAACTCTTTTAGGTGCTCCAGTGCTGTAAGGAAACAGTTGAGATGAGATCGCCAAACCAACCACTGTAACTTGTAACAAGCCATGGAGGATGGAGGTTTTGGCCAGCCATCGACTAGCAATAGGTGTTACTGGACCAAAACACCATCCCACGACCAATCCAATTACTGACCCAACAATGACATCAGCTACAAAATATCCGTATGGTTTTGGGAGAGATCCCATCATTCCCATCTTCTCAATCAAGAACTGGATAAGGAAACCACCATAGTAAAGACAATAAAGGAGACATGGGATCATAGGTACCACATAACCAACCAACAACTTTGGTGATTGTTTGTTCCAATGTTTCCAACTAATGCTACAGATAAAACGCCCAAGAAGCATCGACATGGAAATGAAGAATGTTAGAAAACCTCCACTCAGGCCAGCTAGCATGTAAACCAAAGTTATTAAGGAATAGAGCCCGAAAGCACCCCAAAAATGTGCTTGCTCTGATAATCCCCATATAATCCTCGGGATAAATAGACCAGCTAATGAAGTTGGAACAAACATAAGGAATGCCAAATAAGGGTGAGCAAACCAATTCATTGCATTTTTCGTGAATAGCAATCTTACAGCTGCAGCCACAGCAGGAATGACTATTGCAAGGATGGCCCCAAATGCATGAAGCAGCATTCCTCTCATTAAATCCAGAACAGTCAGAGACCATGACATCAAGGTAATGTTTGGAGACGTCAGGAATAGTGGTGCAAGCAGGAAAATGGCTACTGGAAGACTGTGGAGAACCAAAGAGACACCACGGGGATAAATAACCATGAACCAAGTCAAGTAATCAAAAAAGATAGCTCTCAAATCATCCTTTATAGGCATAGCAGCTTCATTAGATCGCTTATTCTCTTTCAACAGCATGGGAGAATTTGTAAAAGCCTTCACAAGGTTGAATAAATTTTCTCCACGTGCTTGAATACTTCCAGGAAGCAAGTTTTCCACAGTATCATATGAAGTATGGTAAAAATAACCACCCAGAACAAAGATAATATCAAGTCCTGGAATGTTTGTAATGTCTTCAGCAAATATCCTATAATCTGTATCACCTGGGATTATTCCAAACATATCCTGAGCAACACTGTTTGCCATAGGATACTTCGCAGTCTGAGCATAAATACGAGAAGGCCAAGATCCAGGTCCAGATTGACAAACTAAATCAGCACCGCCGCTTCCAGAAGCTTCGATATTAATAAAGGCACCAATCGTGTTGTTCCATTTATGTGTCTTTATGAAACCATGTGAACCCAAAAGGAAAAGTTCTTCAGCTCCGTTGAATAGAAAAATCACCGGTTGAGAAGGAACCCACCCAGAATCAATGATGAGCCTTGATAACTCAAGCATAGATGCAACACAAGAACCACAGTCAGCTGCACCAGGAGATCCAAGTGGACTGTCAAAATGTCCATTCACCAAGAAGGCTAGATCCTGATCTTCTCATAACAATATTCTTGTGATTCCTGTATGTTAGAGTTACTCTGTGGCGCAAAAACCTCATGCTGAACGAGCCACTAACAAGTGATTCCTCAACCTCTATTCTGTACTCCGGCCCCGCGCGCGCGGCGAGCTCCTCGAGCTGCCCCTTGATGTACCGCGCCGCGGCCTCCAGCCCCGGGCTCCCCTCCTGGCGGCCGGGGATGTCGACGGAGAGGCGGCGGAGGTGGTGGAGCACGCGTCCCTCGGAGAAGTCCCCGAGCGGCGCGTCGGCGCCCAGGGGGGCGACGTGGCGCATGTGGATGACGCGGTAGGCGACGAGGGACATGGCGCCGTAGAGCGCCGCCAGGGCGAGCAGCACGAGCGCGGCCTCCGCGGCGCCTCCTCCTCCGCCGCCCGCCGCGGGTCGACGCCGCCGCGGCGCGGGGTCCACCATCGTCGGCGGCGTGGATGGATCGGCCGGTCGGTCCGTCGGGTCAGCCTCGGCGGGCGCCGGGAATCGTCGTGTCGGCGTGTCGCCCGTTGTGCGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0375200.1 | 7 | 11551775 | T | C |
| Osa07LNT0375200.1 | 7 | 11551388 | T | C |
| Osa07LNT0375200.1 | 7 | 11551511 | G | A |
| Osa07LNT0375200.1 | 7 | 11552085 | T | C |
| Osa07LNT0375200.1 | 7 | 11553739 | A | G |
| Osa07LNT0375200.1 | 7 | 11553787 | T | C |
| Osa07LNT0375200.1 | 7 | 11553823 | A | C |
| Osa07LNT0375200.1 | 7 | 11553852 | A | G |
| Osa07LNT0375200.1 | 7 | 11553881 | G | A |
| Osa07LNT0375200.1 | 7 | 11554944 | A | G |
| Osa07LNT0375200.1 | 7 | 11555100 | T | A |
| Osa07LNT0375200.1 | 7 | 11555301 | T | G |
| Osa07LNT0375200.1 | 7 | 11555674 | G | A |
| Osa07LNT0375200.1 | 7 | 11556272 | T | C |
| Osa07LNT0375200.1 | 7 | 11557582 | G | A |
| Osa07LNT0375200.1 | 7 | 11558568 | A | G |
| Osa07LNT0375200.1 | 7 | 11558577 | T | G |
| Osa07LNT0375200.1 | 7 | 11554770 | A | G |
| Osa07LNT0375200.1 | 7 | 11551541 | C | T |
| Osa07LNT0375200.1 | 7 | 11558971 | A | G |
| Osa07LNT0375200.1 | 7 | 11559041 | T | A |
| Osa07LNT0375200.1 | 7 | 11559192 | A | G |
| Osa07LNT0375200.1 | 7 | 11559284 | T | C |
| Osa07LNT0375200.1 | 7 | 11559386 | G | A |
| Osa07LNT0375200.1 | 7 | 11559565 | A | G |
| Osa07LNT0375200.1 | 7 | 11559755 | A | G |
| Osa07LNT0375200.1 | 7 | 11559933 | T | C |
| Osa07LNT0375200.1 | 7 | 11560913 | T | G |
| Osa07LNT0375200.1 | 7 | 11561178 | T | C |
| Osa07LNT0375200.1 | 7 | 11561636 | A | G |
| Osa07LNT0375200.1 | 7 | 11561996 | G | A |
| Osa07LNT0375200.1 | 7 | 11563587 | T | C |
| Osa07LNT0375200.1 | 7 | 11564064 | C | T |
| Osa07LNT0375200.1 | 7 | 11564077 | A | G |
| Osa07LNT0375200.1 | 7 | 11564581 | A | G |
| Osa07LNT0375200.1 | 7 | 11564605 | T | G |
| Osa07LNT0375200.1 | 7 | 11564706 | C | T |
| Osa07LNT0375200.1 | 7 | 11565378 | G | A |
| Osa07LNT0375200.1 | 7 | 11565912 | G | A |
| Osa07LNT0375200.1 | 7 | 11566697 | A | G |
| Osa07LNT0375200.1 | 7 | 11566833 | G | A |
| Osa07LNT0375200.1 | 7 | 11567093 | C | A |
| Osa07LNT0375200.1 | 7 | 11567353 | T | C |
| Osa07LNT0375200.1 | 7 | 11568044 | A | G |
| Osa07LNT0375200.1 | 7 | 11569234 | A | G |
| Osa07LNT0375200.1 | 7 | 11569358 | A | C |
| Osa07LNT0375200.1 | 7 | 11569583 | G | C |
| Osa07LNT0375200.1 | 7 | 11563550 | T | C |
| Osa07LNT0375200.1 | 7 | 11553832 | G | A |
| Osa07LNT0375200.1 | 7 | 11554105 | A | G |
| Osa07LNT0375200.1 | 7 | 11561529 | A | C |
| Osa07LNT0375200.1 | 7 | 11562879 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0375200.1 | osa-miR5794 | Cleavage | 4.0 | 11.766 | 1 | 21 |
| Osa07LNT0375200.1 | osa-miR5835 | Cleavage | 3.5 | 15.566 | 1 | 24 |
| Osa07LNT0375200.1 | osa-miR417 | Cleavage | 3.5 | 19.125 | 1 | 21 |
| Osa07LNT0375200.1 | osa-miR810b.2 | Cleavage | 4.0 | 10.465 | 1 | 21 |
| Osa07LNT0375200.1 | osa-miR1850.1 | Translation | 4.0 | 11.856 | 1 | 21 |
| Osa07LNT0375200.1 | osa-miR1855 | Cleavage | 3.0 | 18.789 | 1 | 21 |
| Osa07LNT0375200.1 | osa-miR1862e | Cleavage | 4.0 | 9.835 | 1 | 24 |
| Osa07LNT0375200.1 | osa-miR2922 | Cleavage | 4.0 | 16.847 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0375200.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0375200.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0375200.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0375200.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0375200.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0375200.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0375200.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0375200.1 | 7 | rn7a | Resistance or Tolerance | Drought tolerance | C39 | RM214 |
| Osa07LNT0375200.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0375200.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0375200.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)