© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0376500.1
GAGCGCCATAATTATTGATTTTCATATATAGGTAACCAATTTGAAATGAAAGTATTTTAAACTACGAATTTAGTGATATAACATGCATAATACTTGGCATAGATATTGTTAGTATAATCAGTAGTAAAAAAAATATCAAGTTTGATTTTCCCTTAAAATAAAGGTACTCTATAATTTGGGAAGGGAGGAGTACATCACAAACATCGACTCACTAAAACATATAAATGTCTCGGATAAATCCTCAACGGTGAGTGGTGCACCTGAAAGGATTTATTTCAATCTATGTGGCATTCAGAGAAGGCTTGCAGCTTTATGAGGAACTTCTATAGCCTAGCTCTTGTCAATTCCCTTGACTCATAATCCATGACACCGGGGATGTGAGTTTCCATAAAGTACTTGTCCCAATTGATGAACTTTATATTACAGGGTATCAATTCTCGGTCTCTTTCAGTAACCATTCCCATAAGATTCTGCATTTTCGAGTCATCGAACCTCGTTTTGGATATTGTGAATGGCCAGTATACCTCTGCCACGGCAACAGTAAAATCATACTCTCTCTTGAGATGGTTGTAAATATGACGGTCTTCAGTGGTAGATAACCCACGGCGCAACATATCCTGCAAAGGCATTTTGTAGTGTTTATCCATGGTCTCGTAGAAGCTGGCCATTGTTGCTAGAAAATTCGGTTGTTTCACCTTGACTACATCTCCTTTTGCACCGACGAATGGTATCTGCGAGAAGTATTTGTACGTTGTTTGAGACATCTGGCCAAGCTTGATCGGGTTGCTCATGGAAGAACCAATCTGATAGATGAAGTCTGCTGTTCCTTGAGGATGGTAGCTGATAATACAAAGCATCGCATTGACCACAATGTCTGCAGGTACAATGTCTATGACTGTTGCCACATCTGTAGGAAAAAACTTCAGTGTCCCCTTACCATAGTTAGTGATCCATGTGTCAATTGCTTTGGCTCCTTCTATCCATCCAGGAAAAGGCTCCTTCCATGTGCTTGTTGTGGCTGATGGACGGATGATAACAATTGGGAGCCGTGAGTTTTGTTCATATGCCAGCATCTCACCCATTGCTTTTGTGAACACATAGGCATTCGCCCATCCAAACTTCTTAGCTCTTTGTGCGCCTATCTTTTTCATGGTGTGTCTTATGGTACGTTCTGAAGCATTGTTGTAAACTAGCTCCTTCAACTTTTCATCCTTAAATGCCATCTCTTCTGAAATATCTAGATCTGATCGACCATCATAACTCCTCCATTGTTGAAGCGGCTTCTCCATCATGATCCCTTGTTTCATTAGATTGACATAAGCTTGTTTCATTAGATTGACATAAGCTGTTGACACAAGAAGAACGAGCTCTAGGTTTGTGCATTTTGATGCAAAATCTATCATATGCTTCACACCCATAGTGTTTATTGCCAACGCTGTATCATATCTTTCTGCGAAGTTTACTGTCGCAGCCATGTGAACAATAATATTTGTTTCTTTCCTTATATCTTCAGCCAGTCTAGCGTCTCCTATACCGAAATTCTTCAAGGACACATCTCCTGCTAGAGGAAAAACCTTGTCCCAGAACCATGAACTGAAGTGCGTTTGATACTTCTCCCGCAAGGGTTGAAATATCGGAAGTTGCATGATCACTGAGGAAAAACCGCTGGCGTGGACGCCATTGATGAGCCACCGGATCCGCCGGCAAAGAAATCGCGGCTGCCGCATCCAACACCCAGAGCCTCCCCTTCGAGTCTGCGTCGGCAGCGGCGTAGCAAGGAGAGCACCGGCAATGAGGGTGCTGCGAGGACACCACCCATCCACAACATCGATCCCCTTCGAGCGGAGAATGGCAGCAGCGTAGGGAGGACACCCGACGGCGGTCACGGCACTGGGAGGACACCCAGCGGCGGCCACGGCCAAGCCAAATCCAGGCGCCGCGCAGGAGAGAGCGAGAGAGATGAGAGGGACATGGCGGCTGGGAGTTTTTTCCTTTTTTTTACGCGCCTGGGATTCTCGCGAAGGGGAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0376500.1 | 7 | 13152473 | T | G |
| Osa07LNT0376500.1 | 7 | 13149992 | A | T |
| Osa07LNT0376500.1 | 7 | 13150959 | A | T |
| Osa07LNT0376500.1 | 7 | 13151462 | A | G |
| Osa07LNT0376500.1 | 7 | 13152390 | G | A |
| Osa07LNT0376500.1 | 7 | 13152753 | A | G |
| Osa07LNT0376500.1 | 7 | 13152775 | T | C |
| Osa07LNT0376500.1 | 7 | 13152779 | T | C |
| Osa07LNT0376500.1 | 7 | 13153021 | G | A |
| Osa07LNT0376500.1 | 7 | 13153102 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0376500.1 | osa-miR5542 | Translation | 4.0 | 15.784 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR1440b | Translation | 4.0 | 10.268 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR160a-3p | Cleavage | 3.5 | 13.223 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR160b-3p | Cleavage | 3.5 | 13.223 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR160d-3p | Cleavage | 4.0 | 13.223 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR399e | Cleavage | 5.0 | 14.957 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR399f | Cleavage | 5.0 | 14.957 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR399g | Cleavage | 5.0 | 14.957 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR167d-5p | Translation | 4.5 | 15.727 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR167e-5p | Translation | 4.5 | 15.727 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR167f | Translation | 4.5 | 15.727 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR167g | Translation | 4.5 | 15.727 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR167h-5p | Translation | 4.5 | 15.727 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR167i-5p | Translation | 4.5 | 15.727 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR167j | Translation | 4.5 | 15.727 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR1320-5p | Translation | 4.5 | 19.804 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR1320-3p | Translation | 5.0 | 11.052 | 1 | 21 |
| Osa07LNT0376500.1 | osa-miR2879 | Translation | 4.0 | 21.635 | 1 | 24 |
| Osa07LNT0376500.1 | osa-miR2879 | Translation | 4.5 | 19.006 | 1 | 24 |
| Osa07LNT0376500.1 | osa-miR5497 | Cleavage | 4.5 | 16.154 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0376500.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0376500.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0376500.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0376500.1 | 7 | rn7a | Resistance or Tolerance | Drought tolerance | C39 | RM214 |
| Osa07LNT0376500.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0376500.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0376500.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0376500.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0376500.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0376500.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0376500.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)