© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0376600.1
GCATCAATGTATCTCTCATTCATTCCTTTTATTTCAACATAAACAGACTCATCCCAAAACAAAGCCAACCCACCACTTAAACCTTCACAACTTACACTAGCACACCCTTTTAACCCTAATCTATTCCGAAGCCGACGAACTTTTTCAAACTTTTGTCTCGTCTCACAAAGAAACACAATTTTGGAACCAGCCTCCCGACCAAGGCACAAAGATCCCAAACTGTCGTGGGGTTCCCAATGCCACGACAGTTCCAACTTAAACAACTTATTGCTCCTGGCGAGTTCCCTTCATGGAACCCGCCAGTTTACCAGCAGCCCCAGGGCTGGTTGCTTCCGACTCTCCCCCCACCAAAGCTTCCCTGTCTGTCTTCTTGAATCTTTTGAACTCCCTGCCTTGAAAACCTATCTCCGGCGCCTGTTTCAGCATAGCCGCTGGCTCCTGTCCTAGCTCAATCAACGCCTGTTGAACCCTGCCTGTCTTCTTGAGTCCACTTTGTGCTGGTGTACTCCTCTTTTGGGCTGATAAGACATCTTTTGTTGAGACTTCTCCAAAAGATGCAGCTTGCTGCAAATTAGCCATCGCCGGTATCATCTCCCCCTTTGAGCTAGGCTCTGAGGATTTATTACCTCTGTTGCCCCCTGTTCGCTCAACTTCTGCAGAAACATTGAGTTTTCTAGCGTGGCTGGCCAACTGTTCATCCACCAACATATCCCCTTCCTTCTCCTTGGTCTCAAAACCATCACGGGCATCCACTCTCGGGGGGATAGCTTCATCCCAATGTTCTTCTTGAGGTCTCTTGGATGATGATGAGTTTGCACTTCCAGCACCACGGAAGACCAATCTGTGAGAGACCTCGGGCTTCTGAGTAGCTTTAACCTTGCCAATCTTCCTCTCAAAAGGCTTAAGAGGAGAGCATCTCAGTTCAGCCGAGAATTGGAACGGTACCTCATTATTTGCACCCTTCTTATCACATTCCTTATCTGAGTGGCCGATATACCCACACATAAAGCAGAAGTATGGGATCCTTTCATAGCGAACATCAAATCTCTTAATCTCCTCCTTGCCTTGAACATGCATTTTAATTGCAATCTTTGGTTTCGGGGGTTTCTTGACAGGCAGGTCCACCCTGATCCTAAAGAAGTCTCCTCCTTGCCTTGAACATGCATTTTAATTGCAATCTTTGGTTTCAGGGGTTTCTTGACAGGCAGGTCCACCCTGATCCTAAAGAAGTCATGTCTATTCCTTCCGTCTTCTTCCACATCCACCTCCCGAACACAACCAAATCTGCTCCCATATAGCTGGCCTCTGGCTTTGGTCATTAAAACCAAGGGGAGATCGTAGATACGAATCCAGATCGGTACTGTCTCCAATGGGATTTTTGAAGGGCAGGTTAGACCGTCAAATGCCGCAACCAGCAGGGCATCTCCCTTATGCAACCAGGGACCTCCTTGCAGGACGAACTTGTAATCACCCTCTGTGCTAAAGGTGATGATGAACAGGTTGTCTCTCAGGGATTTGTGTGTCATATCAGAACGCAGCCGCCATGCTCTACTCATATCTTCAAAAAGCGCAGTTTGATTTGGATTACGTAGAGAGTAGAACCGAGCAAGCACGGTCCAGATACCATCCTGCTTGATCTCTTCATCCTCTATATTCCTCTATCACATCTTCCTCATCTGTTTCGATCTCTCCCACAGTACAGGCTTCAGGTCCTCTTGACTGACTGCTTGATTCCTCCTCCCTGCGAGGTCCTAACTTCTGATTCCCCTGGGACAGTGCCGCCTCCATGTGAGTATTTCCTCCCAGCAGATTACTCCCAGCAGGATTCGTCGCCGCCAACTCCAAGCCTAACCCTTGATCTGACAGACTCAACAAGGCATCCTCATTCGGCTTCGGGCGGGTAATCATCGCATTGATGATCCCTTTATCGCCCCCACCTATGGAAGACACCATAGATTGGATCTGGAGATCTTGACCACGAAACAGGGGTGAACGAGACCTTGACGCTGTTCTCTTTGGATCTTGTGAAAATACTGCCTTCAGCCCTCCCTGATCGTTCCTTATAAAGGGTTGCCTCTCCGAGTCCCAATCTTTCACGAGATCATACCAAAGGCAACACCACAGATCATGACCTAGACCATAACGAGGAATAACAGATTGGAAACCACTAGAACAAATCCGATTCTGGTTTGGAAACCTAGGGCTTGTATATCCCCACGGAATTACCCAGGGTAGACGACTTCCTCTGCCCCACGGTGATTGCAGAACAAACCCTAATTCAACATCTATTCCAAAACCCTGATCTTTACCCAAAACCGAAGAGGATCGAGCAGGCGGAACCCCTGCAGACATCCAGAGCAGATCGGGGATGAACCCCATCCAAAACCATCGCAAAGTTTGAGTGCAGGCCGCCGCCACCCGATCGCCCGGGCGTCGCCAGAACCCTAAACCCATGTGTCCCTGTGAAGGCTGACGTAATAGATACTCTAGTAAGCAGAAATTTAAGTATATGGAGCTACAAATGTTATTGGATGAACAATGCCATGTTCAGGCATTCTGCATGTTATGGCTGCATTGGTTGGAGTCCAAGAATCACGGTTTTCTTGTCATCAAGTCTAACCATAATATCTCCATCTTCGCCCCTGATATTGTAGACGAGTCCATGCCACCTTTCTTGTTTACAACGAATAGGTTACTCCGTAATTCAATTTTCTGTTCCCGACTCCTGGACAGAACAGCCCTGGAACAGACTAGTATACTTCCCAAGTCAATGGTTGTTCTAAAACCTTGAACAGAAAAGGCACCGAGCTGGTGGACAAGTCCAGCCTGCAGAACCATAAGGGTTAATTACCAGCGGATGGTAACTGCAACAATAAGGTACCACACCACGGATTAGGAAATATCAGGCAACTAGCTGCCTCTGCTGATCAATAGTTCATTCTGCAAAGATAATGAAAAACTTTGAAATTAGTAGCAGAACTGTATTTCGCTAACGAACAAATGTCATTCTATACACATCAAACAGCAACTCATGCACTTTACAGATCAACCAAACTTTTTGCATTCTCTCTAGTTCTCCTTAAGTTGATGAAAAATTGAAGTAAAACTAATCATCTGAGAAATCTTCTCTCCCTAAGAATCTTATTTATCCAACCAATCTTGTCATCTAGGCCAGCGAAATGAACCATAAAGTCTCCATCTGAATAAACCCCTGCACATTGCACAATCAATTGGCAATGAAAAAAACTTACCGTAAACAAATTAAAAAAGAACTAAAGCATGGAACACGGGAATCTCTACTTGAGTGACTGGCGCTAAAAGTTATAGAACCACTAAGCTGAGTTGACAATTTCAATCTCTTCTGAAATTAATGCAGGAATAGACAACAATAAAAGGTATCATGCATGTGAATCAAAATTTTATTAACATTACAAATATCAACCACAGCACAAGTATAATGTATCCAATTCTAAAGTGTAAGAAAATGAGGTTTTTAAACAAAGGATTAAGGTTTTAATCAAAATTACAATGTGTAAATTCTCTTTTATAACCAAACAGGCATAAACACCAAAGAAAATTAGTCATAAAGCCAAAAGTATTTTCAAATTAAATTAATTTGGCCATGGGCACCAGGAGATTAAGTAGATAAATCCAGATAACTCCTATAAATCCCAGTTCTAAAATCCATCTAAACCATATTAAATATGTAATGTAGAGTGATTATGAAAACAATGAGACCTTTCCATGTAGTAGAAAGATGGAAAATAAGGCGATGCATTGATTTCCATGTGGGTCTCCAAGGATAGGAATTAAATAAGCACTGCATTTTTGCAATCCGAACATGTTCTTGCATTTCTTCAGGTGAAAAGTGATCTATAAGATGCTTCAATGCTGCATTATCTCCACTTTTTGTGGAACCAAATTGTATGAAGGATGTAAGGTTCCACCATGTGTCCAGAAACTTCTCACTCCACTTTGAGCCCCGTATGAAGAATACTCCAGCGTTAACACCATTGAAATCCTCCGTCAGGATGAGATCAGGAGCAGCATCAAAATCACTGTGCCCAATCACCGAGAACAAAATCATCTCCTCCCAACATTGAAGACCCCTTCTGCACGTGCAACTAGAACCACAACTATTTACGCAACATTTATTGATTACAAAAAAATTGTTTATAAGAATAATGCATCCGACTCACCAACGGGATGTCCGGATTTGTAACCAGTGTGTCCGCGTCGTTCCAGAAGAGCCAGTGGTGGTGGTGGAGGTGGAGGTGGGCGCGGAGGGCGAGGACCTTGCTCCAGCTAGGCGGGCGGCGGGGATCAACGGAAGCCGCGGGGAGCACGGCGAGGCCGTACCCGTGCGCTGCCGCGTAGGAACGCTTGTTCCGCGCGGTGGCCGCCAGCACGCCGCGGAAGGACCGCCCACGCCTGCCGCGGTCCTGGTCCGAGCCCGACGCGGCCCCCTCGTCGGAGAGGGTGACGATAGCGATCTTGAGGAGGGGGGCGGCGCGCGGGAGGAGGACGAGGTCGCCGGCGGCGGCGCGTGGCGGCGGAAGGCACCGGCGACCGAGGGAGTTGGCGCGGCGGAGGAGGACCCCGGGCGTGTACGGAAGTAGCAGGAAGAGGAGGAGCGCTGCGGGGAGGAGGAGCAGGTGGCGCGGGAGGAGGCGGCGCAGGAGGCGAGCGCTGGAGGAGGCGGCGCGGCGCGGCCGTGCGGGCGCGGCCATCGGTGGGGGGCCGCTCTCGCCGTCGCCGTCCTCGCGCCGCTGGACTGGAGAGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0376600.1 | 7 | 13279236 | A | G |
| Osa07LNT0376600.1 | 7 | 13279284 | C | T |
| Osa07LNT0376600.1 | 7 | 13279302 | G | A |
| Osa07LNT0376600.1 | 7 | 13280296 | C | G |
| Osa07LNT0376600.1 | 7 | 13280458 | A | G |
| Osa07LNT0376600.1 | 7 | 13281307 | T | A |
| Osa07LNT0376600.1 | 7 | 13281626 | A | C |
| Osa07LNT0376600.1 | 7 | 13281709 | T | C |
| Osa07LNT0376600.1 | 7 | 13282019 | G | C |
| Osa07LNT0376600.1 | 7 | 13282284 | T | G |
| Osa07LNT0376600.1 | 7 | 13282428 | A | G |
| Osa07LNT0376600.1 | 7 | 13283591 | C | T |
| Osa07LNT0376600.1 | 7 | 13280544 | A | C |
| Osa07LNT0376600.1 | 7 | 13282251 | T | C |
| Osa07LNT0376600.1 | 7 | 13282281 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0376600.1 | osa-miR5543 | Cleavage | 5.0 | 7.686 | 1 | 21 |
| Osa07LNT0376600.1 | osa-miR5793 | Cleavage | 5.0 | 8.955 | 1 | 21 |
| Osa07LNT0376600.1 | osa-miR6252 | Translation | 4.0 | 13.063 | 1 | 23 |
| Osa07LNT0376600.1 | osa-miR156c-3p | Translation | 4.5 | 23.035 | 1 | 22 |
| Osa07LNT0376600.1 | osa-miR156f-3p | Translation | 5.0 | 23.035 | 1 | 22 |
| Osa07LNT0376600.1 | osa-miR156g-3p | Translation | 4.5 | 23.035 | 1 | 22 |
| Osa07LNT0376600.1 | osa-miR156h-3p | Translation | 5.0 | 23.035 | 1 | 22 |
| Osa07LNT0376600.1 | osa-miR162a | Cleavage | 5.0 | 20.292 | 1 | 21 |
| Osa07LNT0376600.1 | osa-miR156l-3p | Translation | 5.0 | 23.035 | 1 | 22 |
| Osa07LNT0376600.1 | osa-miR169b | Cleavage | 5.0 | 22.587 | 1 | 21 |
| Osa07LNT0376600.1 | osa-miR169c | Cleavage | 5.0 | 22.587 | 1 | 21 |
| Osa07LNT0376600.1 | osa-miR408-3p | Cleavage | 4.5 | 20.489 | 1 | 21 |
| Osa07LNT0376600.1 | osa-miR1862e | Cleavage | 4.0 | 14.207 | 1 | 24 |
| Osa07LNT0376600.1 | osa-miR2096-3p | Cleavage | 4.5 | 19.781 | 1 | 21 |
| Osa07LNT0376600.1 | osa-miR5081 | Cleavage | 4.0 | 23.499 | 1 | 22 |
| Osa07LNT0376600.1 | osa-miR5152-5p | Cleavage | 4.0 | 11.772 | 1 | 21 |
| Osa07LNT0376600.1 | osa-miR5337a | Cleavage | 5.0 | 8.401 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0376600.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0376600.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0376600.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0376600.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0376600.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0376600.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0376600.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0376600.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0376600.1 | 7 | rn7a | Resistance or Tolerance | Drought tolerance | C39 | RM214 |
| Osa07LNT0376600.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0376600.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)