© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0377200.1
CAGGAAACAGTGGCATTATTTAAGTTGTTGCCGCAAGCAGGAACGGCAGAAACCATAGTTATTAATCCTGGAGATTTTCAGTAAGAAATGAGACTAGGATCAGCACGCTAACCGCTGCACCAAGCTGGCACATGTTACAAATCGGACAGTGGTTCAAAACAGGTAGGGAAATGACGGAGGTTAACGAAAAATCCTAGCATGAAGGGAACGCCGGCACTAGAAGGGGCTACTGCCACACCTTCACAGCAATGATCATCCAGAAAGATCAGCATTGCATTATGTACATGGTATACAGCAGCCACATACAGCTTGTTACCTTCTATACAAAGCCTTGATATCCTGGCGAATAGCATTAGCCTCCAATAGTTCATCTTCAGAGTCATCAATATCAACTTGATTCAGTTTGAAGTCTTCAGTAGTGCAGAGCTCACTCCATTCAAACCATAGCTTTGGTATAACTTCTTTCTTGAACGCAGTTTCATGGAACTTCACCTCTGGAGAATCAGCAGCAACAAGCCTGTACACAAACACTTTCTTCTGCTGTCCGGGCCTGAATGCACGTCCAATTGCTTGACGGGTGACAGATGGGTTCAAATGAACATCTAGAATGATGACTCTCGATGCACCAACAAGGGAGATTCCCTCTCCACAGGCCTTGATGGAACCAAACAAAACTTTTGCATCGGCAGAGTTGTTAAACTGATCCATCGCCACTTCTCTGTCGTCTGCACTAGTATCACCAGATATCATGAAAATCTCCTTCCCTACATGCCAGCCCAGCCTCTTAACCAACAACCTTTCCAAAAATTTCATGGGAAGTATATATTGACTGAAGGCAAGCAACTTCTCTCCTGCAGAGTTAGCAAGAGACAGAATGTTAAAGAAAAACTTGGCTTTCACCCCATCTTTAATGATGATAGACTCAATCAAGCTGTCAACAGTGGCATCTGTCAAGTTGGTCGCCCTATCTGCAGCATCACCCTCTGAAATTTCTGACAGGCAGGGATGAATGTACAATGCAGTCCCCACCGCACTTCTTTTGAACTTTTCATAGGCTTCTATCTTGTGAACAATTTCTTTCTGCTTGGTACTGAGTTTCAAGAACACACTAAAATCCACTAGGCCAGGTAGTTCATCTAAGATATCACCCTTGTAATAGTGAAGCACATCTTTTGTTAATTCTCTAAGACTTCTAATAACATGAGACTTTCTAGTGAAGTTGTCATCATTCAGCAGGGTGTCTTCTACTGACTCAGTGAATGCACTGTCATGAACCCCTTTTAAACTCCTGATACCTGATATTGCTACCTGACTCATTATACGTCTAGCGATAGGACGGGATGATTCCATCTTGAGAAACTTAGGGCGCACGAGGTCCAAGATGTTAAACACTTCCGAAACATGATTCTGGAAAAGTGTACCAGACAGGACCACTTTGCGTGGTGTTTGGACTCTTTTTAGTGATGCCAGTACATCTGTTTCCCGATTTCTTGGTGTATGACCCTCGTCTAGTATAAGTAGGTTGGGGACCATAAGCAGCCTGTCCCGGCACGCAGCTGCAATGTTTCCATCTCCATCACCACAGATGATTCGTGAGAACTGCTTGTATCCAAGAAATAGTATGCTCATCCGGGCTTCCCAAGATTTGAGGACTTCCAGTTGCTCTGTTCTTTTATCAGCCTTAACAGAATAGAAATCATATAGTGGTATGTCCTCCACTTGCCACCGCTGAAACTCCCTCTTCCAAGTACCTAAAATCCCTTTCGGAAGCACTACGAGGGGCCTTGCAGAAGGATACTTTGCTAAGAAGCTTTGAATGAAACTTATGAGCATAAATGTCTTCCCTGAACCAGGAGCATGAGCTAGAATACAACCTCCAGGTTTGTCTCCAACTAGATTCTTGACCAGGAAGCTGAATCCTTCCAACTGATGTGGTCTCATTTGCTTCGCATGTCTTGGATGAATGGCAATATCAGAGACAATGAAATCTTCAGAAACTTTAACAGCACCAGTATCAATATCATCAGCATCCTTTGAACGTGATTCATAGTAATTTGTTCTTGTCCTTGAAGCCTTTTTCCACTGATAATCAATTATTGTTTCAGCCTTTCTAACAATCATGCCACAAATACGGCATACATGGCCTAGATCTTCATGAATCCGAATGTCATGATTGCAATCGTCATCCATCTCGTTTTCATCATCCACATCTTTTTCATTGGACATGTCTTCATTTGTATCAAGCTTTGTACATTCAGCAGCCAATGAAAAATCTTTCCAAAGATCCTCGAGACCATCACTTTCTTTTACAGGTTTCTCCTCTTCTATCATAGTCCTGTAGCTTTGTGAAGGAACATCATTTTGTTGCAAAGGAACAACAGTTTGTTGCAAATCCAAGATTGAATCAACTGCTGCTTGATTTTGATGATTTTTCCTTTTTCCTTTCCCTAGGTTAGTTCCACCATCTCCATCTACCAGGGTGGTCGGTTCTGATTTCCTTCGTTTTCTCTCATTAGGAAGAGTAGGCAGAGTAAGGAAAACTTGTGTTTCTGCTATCTTCTCTGCATGGCTTGCTGCCACAAGATCTTGAACGCGTTGCTCCTCAGGTCTTCTCTGCAATATAACCCTTTCATATTGGATAGATGGTTGCCAGCTGGTTTGCAAAGGGGACTGATTTATTAAAGGTGCATTTTGACCATATGGAACAATTTGAGTGCTTTGGACTCCATCAACATGCAAGGTTCCATTTACTTGGTCTTTCGCACTGGATACAATCCATGTTGTGCAAGGACTAGTGGGTCCAGATGGTGCCTGTTGTTTATTGTTCTCAGATGCGAGCTGTTCACATCTTTCTGCTTCGTCCTCATCATCGGAATCAAGAACTATTATTGCTGAGCTGTCCTTTTGTTTTTGCTCCAAAGGAGTGTCCATGTTAGCATCCATTCTAGTGGTTATCAAAGAATTTGCAGTGCGTTGATGCAGTGAAGAAAGAAAATTGATCAACTGGAGTTTGCGAGCATAACTAGCTTCCCATTCTTCGCGAACACCGCCATATCCCCAATCATGAGCCCTATTTGATGCAGGAAATGAAATACCATTCTGACCCCCAGGCACAAACACATTGGCATTGACCTCAGAAGAAGCCTTCCTTTGCCTGCAGTAATACATTCTGGAGGATGGCGTCGCCGGCGGGTCCCTGCCGGCAGCGGCCATGGCGTGGCCGCGGCGCGGGAGGCGGAGACCGAGACCGAGACAGAGACAGAGAGCGGCGGCGTGTGGCGCGTGCGTGTCAAGTGTCGCTGGTGGAGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0377200.1 | 7 | 14508551 | A | T |
| Osa07LNT0377200.1 | 7 | 14508805 | T | G |
| Osa07LNT0377200.1 | 7 | 14506052 | A | G |
| Osa07LNT0377200.1 | 7 | 14506099 | T | A |
| Osa07LNT0377200.1 | 7 | 14506241 | G | A |
| Osa07LNT0377200.1 | 7 | 14506595 | G | C |
| Osa07LNT0377200.1 | 7 | 14507097 | A | G |
| Osa07LNT0377200.1 | 7 | 14507911 | A | G |
| Osa07LNT0377200.1 | 7 | 14508281 | A | G |
| Osa07LNT0377200.1 | 7 | 14508703 | A | G |
| Osa07LNT0377200.1 | 7 | 14508778 | T | C |
| Osa07LNT0377200.1 | 7 | 14508904 | A | G |
| Osa07LNT0377200.1 | 7 | 14506023 | G | T |
| Osa07LNT0377200.1 | 7 | 14508918 | A | C |
| Osa07LNT0377200.1 | 7 | 14509003 | A | G |
| Osa07LNT0377200.1 | 7 | 14509816 | A | G |
| Osa07LNT0377200.1 | 7 | 14511616 | A | C |
| Osa07LNT0377200.1 | 7 | 14511673 | G | A |
| Osa07LNT0377200.1 | 7 | 14511785 | T | C |
| Osa07LNT0377200.1 | 7 | 14511830 | A | G |
| Osa07LNT0377200.1 | 7 | 14512283 | C | T |
| Osa07LNT0377200.1 | 7 | 14512357 | T | C |
| Osa07LNT0377200.1 | 7 | 14509717 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0377200.1 | osa-miR5530 | Translation | 4.5 | 16.107 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR5533 | Cleavage | 5.0 | 13.121 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR5535 | Cleavage | 4.5 | 12.528 | 1 | 22 |
| Osa07LNT0377200.1 | osa-miR393a | Translation | 5.0 | 17.316 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR169f.2 | Cleavage | 4.0 | 9.984 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR171c-5p | Cleavage | 3.5 | 8.779 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR393b-5p | Translation | 5.0 | 17.316 | 1 | 22 |
| Osa07LNT0377200.1 | osa-miR419 | Translation | 4.5 | 16.993 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR1428a-5p | Cleavage | 5.0 | 18.206 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR1857-3p | Cleavage | 5.0 | 14.814 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR1861n | Cleavage | 4.0 | 18.375 | 1 | 22 |
| Osa07LNT0377200.1 | osa-miR2099-3p | Cleavage | 4.0 | 17.13 | 1 | 20 |
| Osa07LNT0377200.1 | osa-miR1863c | Translation | 4.0 | 19.333 | 1 | 24 |
| Osa07LNT0377200.1 | osa-miR5081 | Cleavage | 5.0 | 16.845 | 1 | 22 |
| Osa07LNT0377200.1 | osa-miR5147 | Translation | 3.5 | 19.362 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR5147 | Cleavage | 5.0 | 18.562 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR5499 | Cleavage | 5.0 | 9.073 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR5524 | Cleavage | 5.0 | 17.962 | 1 | 21 |
| Osa07LNT0377200.1 | osa-miR5812 | Cleavage | 5.0 | 17.075 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0377200.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0377200.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0377200.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0377200.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0377200.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0377200.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0377200.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0377200.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0377200.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0377200.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)