© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0377800.1
ATAGTAAAAATTCTGATATTTGACATTGCCCAACATATGTAGTAACTATATACATATATAAATCTGTACAGTATTATAATACAAGATTATGATCACTCACAACTGCATGCAGGGGGCACCACAAATAAGAGAAGACGGAGCAGTGCCTTTCTTCTTCGAACATGTACAGGAAATTCACTAGGAACATCAGTGATCACAGTTAAAACACCATTCCTCTAATAATCATCACATCAGCATTCGCAGTTAGACGAGCTGCTCCCGAAGCAGCTGTTCTTGGGCGTCATCTTCCTGACGCTGTCCTGCAGGAACTGGAGCGTGCTGGGCGAGATGTAGGAGGTCCTGTCCATGGTGTTCACCTTCGGCGCCTCGAGTATGGTTCTTGGAGGAGACAATGCATACTGCATTGCCCAGATTGCAAGGGGCCGCATGTATATCAGCGACCTGTAGTGGCCGTCGATCGTCCATGCTTCAGGGGTTTGGAACCAGTACCCATAGCCTTCTTCGGACCATCCTGCGGTGAAAATGCCTTCTGCAGTAGTGAAAGCCTGATCGTCCATTCCATGGAGCAGCATAGTAGCAGCTAAACTGTACGTTACTCCTGTCCAGATTTCTCTTGACTGCATACAAGTCTCGTCTACCTTACCATTTGGATGCATACCGTTCACAGCTCCCATACGCCCTCCTTTTACCCTCATCACATTATAGTCAAATATTTTCTGAAGGGTGCATTTTATCCTACCCTCATCAAACAGAGGCGGCAAACCTGACGATGCAGTATACCATTGTCCAGCCAGTTGATCCGCATGGATGGAGCGACTGTTGTAACTTGTTCCGCTGTCATAATTAAAATATGAACCATTCCATAACTTTGCTTCAAATACGGGCTTAGCTTTTGCAAACTTCAACATGCACCTCTCAGCATAATCATGGTGTCCAAGGGTGCGGGCCAGCGCTGCTGCAGTTTGAAGGGCAGCAAGCCAAAGGCAACCACAGTAGGCACTTACTCCACGAACTGTCCAAGCATCATATGTTTGATCAGGAAAGCCATCATTCTCAATCATACCATCATCGTCATGGTCAAACTGTTCCATGTACTCCATAGCAGTACAAACCGCAGGCCAGACATCCTTGCCAAATGACATGTCACCTGTTGCCGCGAAATCTCTGTAAACCTGTAGCACGAACTTGGGATTGAGATCTTTCCATCTACTTGTGTCATGTATGTTGTACGCATTCAATTCATGCCAAGGATCATGGGCCCCAAGGTCATGGGCAACAGCACCGATTACTTTGCGAGTGCCCCAAGTACCATCAGCAAGAAACCTGACTCTACTTTTATCTTCGCGCAGAACAGATCATAAGTGCACCACATGAAGTACTCTATTCCTTCCAGGTATAAAAACTTCCCTACATTTTCCCTGTCATCAATTATATGTGGGCTAAAACCAATGAGTGGAACTGCAGAATTGCGACTGCTATGATGAAGTGGCAAATCATTGTCCTCAGATAGCCTTGAGTTCATCATTTCATCAGCATCAGCCATCAAAGATGCACTATCTATCCAAACAGTTCCTCCAGCAACTAGGAAGTACAGCTCATTGAAGAGAGTAACCTTGTACCACTCCGGAAACCTCTCATCATGGAGAATTGGCCTCTGCCACTTATCAATTTCCTCTTCCCAGTGCTTATACTTCATCAAAGAATCTTGCACCAAGTTTATAGCTGACCTTGGAGAAGTTCCATAAAATTTTGTATACCTCCTGTAGTATGCATTTCCCTTCTTAAATTTGACCTTAGGGGATGACCAAGCCAGGGAAAATACGACTGTACATCTTCCATGTGGTTCAACCCAGGTGGATGCACAAACTGCTGCACAAACTGTATCACCCAGCGAAGAAGGCATGCTAGGGCCGGCACTGAAATTATCTCGGTCGAAGCAACCATCCTGGCTCAATGTGCCCCACATTTCCCTAGCTGTAACAGAACTTTCTCCAGAAAGCCCAAAAGCAGGCAACACAGTGACATTTACATTTTGGTTCTCACATGCTGCAACAGCAAAAGTTACAGGAGGATTATTGTTGGCAGTCTTGTGATGCAGAAGCACGCCAGAAACTCCATTTTCTCCTATAAATGGCTCATTTACATGACCGCCGGAATGATGGGAAAGCCCTCCAATAGAATTCGCCCAGGTCATTACGAGGCTGACTTTTGCCCTTTCTTTACCAGTGTTCACTATAGTGTAAACAAAAACAGAGGTAGGAAGACTGCTCTCTTGATAGTTATGGGGAATAAAAGGAGATATTTGCCGGCAAGATACTTTCAATTCAGGATCAGGTTCACCATCATAGACAGTCCATGCTCGAGGAAACAACGCATGGTATGTAGAACGATCACCTCTTAGTTTCCAATCCCAGGATGATATACCATCATCATTAGATTTCCTGGACCAAGAAACATAAAAATAACCGGACAATTGTTTCATATGGACTATGATTGCTATATATTTTACATAAAAGCATAGATGAGAATATTTCAGGTAGATCCATTTAGACAACGTCCAGATGAAGTTTCATACTAAATATACTATATTGAGGATCAGGGAGAGAGTCATACTTTAAACTATCATGCTGACCAGGAGCTAAAACAGAGGAGTATTTTTTGTTTCCTCCTCGAGTTATAAAGATCGAAAATTGGTTTGCCATGACTGGTGACATTTCACATGAACCTGGGATTATCTGCCAATGTTTAAATTCTCCTCTGAACCCTCTTGAAATGCTACCGCTCCCCATCCCACCAAGAGGTACACCTTGCGAGGCTGAAGGTTTGTCGCTCTCCCTCGTGAATGGATCAATTGGTGCTTTCCTTCCATGAGAAGCTTCTTCCCGAATATATGACCAGAGGCGCAGACCAAGTTTCATCATCTTAATTGCTTCTCTAAAGGTAACATTGAACTCCTTCAATCTATTGGCATGACTACTTAGTTTTCTTCTCCAAGCATATTCTGGTGGTGAGCCATCATCAAAGTCCAGCAATTGCAGGGTGCTCCTGCTCACGAGATCACCGGCACGCCATGAGCGCTTCCTCCGGTAGAACATGTTGCTGCTCACCATTGCTCTCCCGTCGCCAAAAGCCCAAGATTATCGCAGAGAAGGAAAGAAAAAAACAATTTTTCACAAAATCTCAAACTGCCCCAGTTGGATAAAGTCCTGAGAGAACCGAACAGTCCTGAAATAACGGAAGTCGCAGGAATGAAACCCACAAATACACGACATGGGGACGAATTTTGAACGGGACGCAACCAAGAATTCGAGCAGATTAAAGCGATAGTAGCTGAACTTCTACCAAAGTACCAGCCAAAAAAAGAACCTTTAAAATCGCTCACAAATGTACCCAGCAGAAGAAAATCCAGGAAAATTCAAATCAAATTATGGACCTGAGCTCGAATCAAATTAGGCAAGAACAAGTTACTCCCTCTCTTCATAAAAATTAAATTAGGGAAAGGAGCGGATTCAGGGAATCTCCTACTGGAAGAAATCGGGAAGAACCCACGAGCTGTACCCACGGGAATGGACGGTTGGTTCGAGGGGAAGCTACGAGAAAGCTCGAATCTATTTTCCCCTCGCGGCGAGGAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0377800.1 | 7 | 15072998 | A | C |
| Osa07LNT0377800.1 | 7 | 15070420 | A | G |
| Osa07LNT0377800.1 | 7 | 15070279 | A | T |
| Osa07LNT0377800.1 | 7 | 15070464 | G | A |
| Osa07LNT0377800.1 | 7 | 15070737 | A | G |
| Osa07LNT0377800.1 | 7 | 15071462 | A | G |
| Osa07LNT0377800.1 | 7 | 15071523 | T | C |
| Osa07LNT0377800.1 | 7 | 15071903 | A | G |
| Osa07LNT0377800.1 | 7 | 15072063 | T | C |
| Osa07LNT0377800.1 | 7 | 15072092 | T | C |
| Osa07LNT0377800.1 | 7 | 15072637 | A | G |
| Osa07LNT0377800.1 | 7 | 15072977 | G | A |
| Osa07LNT0377800.1 | 7 | 15073802 | A | C |
| Osa07LNT0377800.1 | 7 | 15073808 | T | A |
| Osa07LNT0377800.1 | 7 | 15073827 | G | A |
| Osa07LNT0377800.1 | 7 | 15073892 | C | T |
| Osa07LNT0377800.1 | 7 | 15074417 | T | C |
| Osa07LNT0377800.1 | 7 | 15074597 | T | A |
| Osa07LNT0377800.1 | 7 | 15075076 | A | C |
| Osa07LNT0377800.1 | 7 | 15075298 | T | C |
| Osa07LNT0377800.1 | 7 | 15075769 | C | T |
| Osa07LNT0377800.1 | 7 | 15076302 | C | T |
| Osa07LNT0377800.1 | 7 | 15076529 | T | G |
| Osa07LNT0377800.1 | 7 | 15077331 | G | A |
| Osa07LNT0377800.1 | 7 | 15077481 | G | A |
| Osa07LNT0377800.1 | 7 | 15077568 | C | G |
| Osa07LNT0377800.1 | 7 | 15077754 | C | T |
| Osa07LNT0377800.1 | 7 | 15077803 | A | T |
| Osa07LNT0377800.1 | 7 | 15077946 | T | C |
| Osa07LNT0377800.1 | 7 | 15077045 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0377800.1 | osa-miR5526 | Cleavage | 2.5 | 10.246 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR5532 | Cleavage | 5.0 | 11.668 | 1 | 22 |
| Osa07LNT0377800.1 | osa-miR5807 | Translation | 4.5 | 13.652 | 1 | 24 |
| Osa07LNT0377800.1 | osa-miR6245 | Cleavage | 5.0 | 18.488 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR6251 | Translation | 4.5 | 10.242 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR167a-3p | Translation | 4.5 | 23.52 | 1 | 22 |
| Osa07LNT0377800.1 | osa-miR164d | Translation | 4.5 | 14.259 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166l-3p | Translation | 5.0 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR169f.1 | Cleavage | 5.0 | 14.696 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR169g | Cleavage | 5.0 | 14.696 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR169h | Cleavage | 5.0 | 14.696 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR169i-5p.1 | Cleavage | 5.0 | 14.696 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR169j | Cleavage | 5.0 | 14.696 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR169k | Cleavage | 5.0 | 14.696 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR169l | Cleavage | 5.0 | 14.696 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR169m | Cleavage | 5.0 | 14.696 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166h-3p | Translation | 4.5 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR1429-3p | Cleavage | 4.5 | 13.026 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR1861n | Translation | 4.5 | 21.98 | 1 | 22 |
| Osa07LNT0377800.1 | osa-miR2878-3p | Cleavage | 5.0 | 12.407 | 1 | 24 |
| Osa07LNT0377800.1 | osa-miR5338 | Translation | 3.5 | 17.875 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR5340 | Cleavage | 3.5 | 19.449 | 1 | 23 |
| Osa07LNT0377800.1 | osa-miR5340 | Translation | 5.0 | 14.001 | 1 | 23 |
| Osa07LNT0377800.1 | osa-miR5494 | Cleavage | 4.0 | 14.064 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166a-3p | Translation | 4.5 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166b-3p | Translation | 4.5 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166c-3p | Translation | 4.5 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166d-3p | Translation | 4.5 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166f | Translation | 4.5 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166k-3p | Translation | 5.0 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166j-3p | Translation | 4.5 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR444b.1 | Translation | 4.5 | 21.092 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR444c.1 | Translation | 4.5 | 21.092 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166e-3p | Translation | 4.0 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166g-3p | Translation | 4.5 | 22.659 | 1 | 21 |
| Osa07LNT0377800.1 | osa-miR166m | Translation | 4.5 | 22.659 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0377800.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Osa07LNT0377800.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0377800.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0377800.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0377800.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0377800.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0377800.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0377800.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0377800.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0377800.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)