© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0378100.1
GTGCTCACAAAATTCCTATTGAATCTCATCCACTTTCACACTATATATCCGGATTGCACAACAGGGAGTAGCATTAGTACAAATGACAGCATTTTGAAACTAGTCAAAATGCAAAACAAGTATATAAACAACTGATCGGTCGATTACCATACAGTACATTTCTTATACCCCTCCGTCTCTAAATATTTGATGCCGTTGACTTTTTTAAACATGTTTGACCATTCGTCTTATTAAAAAATTTAAGTAATTATTAATTTTTTTAATCATTTGATTCATGATTAAATATACTTTAATGTATACATATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAACGGTCAAACATGTTTACAAAAGTTAACGGTGTCAAATATTCAGAGACGGAGGGAGTATATCCTTGTTCTTCATATTTGTAGTTTACACAGTATATTATAGCTTAGGACTTTGCCACCATTGAATAGTTTCCGCTGCTAGGAAGCAGAATCCCGCTCTTGAGATGGTTGACAAGTGCCAGCCACATAGATCGTGTAGCGCCGTAGAAGATGAACGATAGGAGAGTCAGAACTATACTGTTGAAGAGGTAGCGCTCCCACCAGTCCATGACGTACAGCCCAACGGTGACGTTGTACAGGAACAGCTTCCTGCCCATCCAACTCATCTCCTTTATAGTGTTGTACTCGATAGCTGTTCTCTCTCACTCTGTGTAGAAATTGAAGAGGCATGTTGGTGTGTTGGTATTTATAACTGGAGGAGGCAGCAGCAAAGACCTTGCCATTTGCCAAGCTAGCCATAGCCAGCCAGCCGCTGCATCTCGCCCGGTTTTTCTTCTTCTCACACTTGGGACACCAACTAAATGCAGCCCTTGCTGCAATATTTTTTATTAATTAAAACCCGATCTCTACATCCAAACCAGAGTCTGGTATACCGTATACGTAATATTTTCTGCAATATGATATGCTAAGGAGAATCGGCTATGGAGTTATGGAAGTCGTCGCAAGAGAGGATAAGTGACTGTTCAGTACGTACCTACTCGAATATGAACTCGCCTAACAAGCACGACTTTTTCCTGTTTGACATGCTATTAGAAATTTTCATGGTTACAACTAATTACCATGGGGCAACCGGGGTACGTTAGAAATTTAATGAAGGGACCAAATAAACTAATTCATGTATGGAGGGGATGACTATTACTTTGTTAATCACTTGACATTTCTCCCCCTAAAAATAGTCCGATCCACACCGGGTATAAACCTAAATCACACTTACGGCTAGAGCAACGCAACCGAAATCTTCCGAAAAGCTAATTGCAGTTAATTGACTTATCCATGAATTCAATTGCTTTCAAGGATTAAGCCACTCGCAACTGATGCTTGTGAGTTCGGATGGGGTGTTGAGACGACATGCGGAACTAGACAAACCGTTAGCACATGATAGATCGAATATTAATTACTATATGAAATTAGAAAATAGATTTGTTTATTTTTTTTAAGAAGCCTCTATATAGAAAAAGAGTAAATTGCATTGGTGGTACACAAACTTGTTATGTGGGTGCAATTTAGTATATAAACTTGTAATATGCTTATTTCGGTACACGAACTTGTCTAGTTTGTGCGAATGAGACCAAAATAGCTTGTCAATGTTAATTTTATAAAGCTGATGCTAATTAGGATGTGACATGCAAACGTATAGTGAGTATGCATAAGACATGCAATATTTATAAGGAAAAAGTACGAATTACACCCTCGAACTATTGCGGTCGACCGAATTACACCCCTGAACCACGAAACCGGACATTGCTCACCCTGAACTTTTAATACCAGAAAAATTACCCCCCTCGACCTAATCCAGAGCTGTTTTATCCTACGTGACGTACGCATGGCAGTCCGGTCAGTATTTTTTTTAAAAAAAAATGGTGGGGTCCACTTGTCATGCCTCCACCTCATCTCTTCCTAGTTTCTCTCTCATGTAATCTCTATCTCGTGCGTGCGGGCGGCGGACGACGGTGCGTGGGGTCGGGGGCGGGCGGTGGACGGCGGCGGCAGGCGTGAGGCGAGGAGGTCGGGGTGGACGGCTGCGGCCGCGAGGCGAGGAGGTTGGGGTGGACGGCTACGGCGGCGACGGCGGAGGGGGACGACGAGGAGGCGGCTCGATGATGGACCTCAGAGAAGGATGGAAGGGAGACGCGCGATAGCAGCCGGCCGTCCGTCATGACCTCAATCCGCCGACTCCCGTCACCGGCGCCGCTTGATCTGCCGTCATCGTGGTCGCCACCTCCCCACCGCTCCCGCTGCCAGCCAGTTCCCTCTCCCGTTCGCGTCTGCCGCTGGCTTGGTCTACCTAGCCACGCCGGTGCGCCCGCCGCCGCTCCTGTGCCCCCCCCTCCGCGTGAGCGCGCGCCGTGGCTCATTGGCAGCTCGCCAGGGCAAGCGATGGCGGAGGCGGAGTGGGCGGCCGGCTGAGACGGAGGCAGAGTGGGCGGCCGGCGTCGGAGGCGGAGTGGGCAGCCGGCGGCGGTGAGCGGCTAAAGCGGAGGCGGAGCTCGCCGGGGGCCGGGGCAACCGATGGCGGAGGTGGAGGCGGAGTGAGCGGCTGGCGGCAGAGCCGGAGTGGGCAGCCGGTGGCGGAGGCGGGTGCTGGCGGATAGGGCGGTAGCGTCTCTCCGACCTCTTGGTCCTCCTCATCGACAAACGACGCGGCCGTCGCGGGTGGGGCGGCGAAGCCTCCTTCCTCTCCTCCCACCTCAACCGCGCGTCACCGTCCTACTCGTCATCGTCGTCCATGGCCGGACCACGCCGCCGTGCTCCAGGCCTAGCGGCGTCGCGTGCGCACGAGCAGGCACTCGGCGGCAGCGACACTGCGTTGCTCCTCCCTCCATCAGCGCCGCCACAAGGCCGTCGCCAACGCCGCCCTCTCCCCCTGGCGCCAAGCCCGCCTCCCGTGCCCACGTGCCGTCTTCCCGCGTCCCTTCCTAACCACCGCCACGCGCTGCTCTGCACGCCGAGAGAGAGGGAGAGAGATTGATAGGAAGAGGGGAGAGGGGAGATGAGAGAGTTATATGACAGGTGGGCCCCACCATTAAAAAAAGAGAAAATGCTGACTGGATGCCACGAGTACGCCACGTAAGACAGAACCGCTCTCGTTGGGTCGAGGGGGTAGTTCGTCCGGTATTAAAAGTTTAGGGTGAGTGATGTTTGGTATTTAGGTTTAGGGGGGAATTCGGTCGACCGCGATAGTTCAGGGGTGTAATTCGTACTTTTTCCTATTTATAAATTTGGTCTCTACTTTATCCTTCATCATGGAAACGATGAATTTCATATATTTTTAACCTTTATATCATTGCTCGGTTTTTTTTTTAGATTTTTCTACGATCGCTATATCCATTCTATTTTTACTGAAGAGGTGTATGTCTAATACAAACCTTCTCGGATATATGTTTACCTAGTATCCTAATCGGCCACTAAATCAATAAGATTAGTGTTCTTTTCGCCTTTCTCCGTACGCACCAGACAAGTTCATGCACCAAAACGAGCATTTAACAAGTTTGTGCACTAGATTGCACCCACCTGACAAGTTCGCGTACTAGTGACGTAATTTACTCTAGAAAAAAATTACACAAAACATACCATTCACCAGTTTCCGAAACACGCTAACGGAGAGCGTCGTCACGTGTATATACTACTCCCTCCGTTTCTAAATATTTGACGTCGTTGACTTTTTTAAATATGTCTGACCGTTCATCTTATTCAAAAAATTTAAGTAATTATTAATTCTTTTTCTATCATTTGATTCATTGTTAAATATACTTATATGTATACACATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAACATTCATACATGTGATAAAAAGTCAACGTGTCAAATATTTACAAATATTTAGAAACGGAGGGAGTATATGCCTAAGCAAGCTTTATTTACCTTTGTTTTGTTTCAGAAACAAACTGTATACGGAGTCAAACTTGACGTGCATCAGTATTGCCTAATCAAGGGAAAGGTAGAGTTTGAACTAACCAATACTCCCTGCGTCCCTAAATATTTGGCGCCGTTGACTTTTTAGCAAACGTTTGATCGTTCGTCTTATTCAAAATTTTTTGTGCAATATGTAAAGCTATATGTATACATAAAAATATATTTAACAATGAATCAAATTATAGGAAAAGAATTAATAATTACTTAAATTTTTTTAATAAGACGAACAATCAAACGTATTTAAAAAAATTAACGGCGTCAAATATTTAGGTACGGAGTGAGTAGTATATTGTCAACTCATGATTTGGACTGATTGAATTAATGAATTAGATTTTGTGAACGATAGAAACTGATCGATCGAGTTCATCCTACAGTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0378100.1 | 7 | 15311577 | T | C |
| Osa07LNT0378100.1 | 7 | 15310581 | T | C |
| Osa07LNT0378100.1 | 7 | 15314131 | T | C |
| Osa07LNT0378100.1 | 7 | 15314433 | A | G |
| Osa07LNT0378100.1 | 7 | 15310735 | C | T |
| Osa07LNT0378100.1 | 7 | 15311521 | C | T |
| Osa07LNT0378100.1 | 7 | 15314619 | C | T |
| Osa07LNT0378100.1 | 7 | 15310364 | C | T |
| Osa07LNT0378100.1 | 7 | 15311530 | A | G |
| Osa07LNT0378100.1 | 7 | 15311551 | A | G |
| Osa07LNT0378100.1 | 7 | 15311795 | T | G |
| Osa07LNT0378100.1 | 7 | 15311915 | A | C |
| Osa07LNT0378100.1 | 7 | 15311934 | T | C |
| Osa07LNT0378100.1 | 7 | 15312300 | A | C |
| Osa07LNT0378100.1 | 7 | 15312569 | G | A |
| Osa07LNT0378100.1 | 7 | 15312711 | C | G |
| Osa07LNT0378100.1 | 7 | 15312817 | G | T |
| Osa07LNT0378100.1 | 7 | 15312896 | C | A |
| Osa07LNT0378100.1 | 7 | 15314798 | C | A |
| Osa07LNT0378100.1 | 7 | 15314853 | G | C |
| Osa07LNT0378100.1 | 7 | 15314878 | G | A |
| Osa07LNT0378100.1 | 7 | 15314976 | T | C |
| Osa07LNT0378100.1 | 7 | 15315588 | A | G |
| Osa07LNT0378100.1 | 7 | 15313092 | G | A |
| Osa07LNT0378100.1 | 7 | 15313954 | G | T |
| Osa07LNT0378100.1 | 7 | 15314014 | G | T |
| Osa07LNT0378100.1 | 7 | 15314335 | T | G |
| Osa07LNT0378100.1 | 7 | 15314153 | A | G |
| Osa07LNT0378100.1 | 7 | 15313174 | A | T |
| Osa07LNT0378100.1 | 7 | 15313004 | T | C |
| Osa07LNT0378100.1 | 7 | 15314504 | C | T |
| Osa07LNT0378100.1 | 7 | 15314678 | C | T |
| Osa07LNT0378100.1 | 7 | 15314790 | A | G |
| Osa07LNT0378100.1 | 7 | 15313090 | T | C |
| Osa07LNT0378100.1 | 7 | 15310477 | T | A |
| Osa07LNT0378100.1 | 7 | 15315155 | T | C |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa07LNT0378100.1 | DTM_#DNAt_MULE_japo_Os0166 | Chr7 | - | 15312994 | 15314533 | 1539 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0378100.1 | osa-miR5543 | Cleavage | 4.5 | 6.483 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR812s | Translation | 1.5 | 12.259 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812s | Translation | 4.0 | 7.947 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR5799 | Translation | 1.5 | 12.259 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR5799 | Translation | 2.5 | 7.947 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR5824 | Cleavage | 5.0 | 18.781 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR6248 | Cleavage | 4.5 | 12.934 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR6252 | Cleavage | 4.0 | 13.257 | 1 | 23 |
| Osa07LNT0378100.1 | osa-miR166a-5p | Cleavage | 4.5 | 13.071 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR166a-5p | Translation | 4.5 | 17.697 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR166e-5p | Cleavage | 4.5 | 13.071 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR166e-5p | Translation | 4.5 | 17.697 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR397b | Cleavage | 4.5 | 12.582 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR159f | Translation | 5.0 | 16.274 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR529a | Cleavage | 5.0 | 21.912 | 1 | 20 |
| Osa07LNT0378100.1 | osa-miR812a | Cleavage | 2.5 | 12.323 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR812b | Cleavage | 2.5 | 12.323 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR812c | Cleavage | 2.5 | 12.323 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR812d | Cleavage | 2.5 | 12.323 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR812e | Cleavage | 2.5 | 12.323 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR1439 | Cleavage | 3.0 | 12.4 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR1439 | Translation | 5.0 | 18.851 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR1874-3p | Cleavage | 5.0 | 24.802 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812g | Cleavage | 3.5 | 12.259 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812g | Translation | 4.0 | 7.947 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812h | Cleavage | 3.5 | 12.259 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812h | Translation | 4.0 | 7.947 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812i | Cleavage | 3.5 | 12.259 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812i | Translation | 4.0 | 7.947 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812j | Cleavage | 3.5 | 12.259 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR812j | Translation | 4.0 | 7.947 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR1320-3p | Cleavage | 4.5 | 12.037 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR2922 | Cleavage | 4.5 | 10.113 | 1 | 20 |
| Osa07LNT0378100.1 | osa-miR2929 | Translation | 4.0 | 14.192 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR2929 | Translation | 4.0 | 10.126 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR3980a-3p | Translation | 5.0 | 23.864 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR3980b-3p | Translation | 5.0 | 23.864 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR812o-3p | Cleavage | 4.0 | 12.346 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR2863c | Translation | 3.0 | 15.95 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR5148a | Cleavage | 3.5 | 14.391 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR5148b | Cleavage | 3.5 | 14.391 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR5148c | Cleavage | 3.5 | 14.391 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR5156 | Cleavage | 4.5 | 15.035 | 1 | 24 |
| Osa07LNT0378100.1 | osa-miR5490 | Translation | 4.5 | 8.012 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR5492 | Cleavage | 4.0 | 15.135 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR6248 | Cleavage | 4.5 | 18.635 | 1 | 21 |
| Osa07LNT0378100.1 | osa-miR812a | Cleavage | 5.0 | 9.999 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR812b | Cleavage | 5.0 | 9.999 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR812c | Cleavage | 5.0 | 9.999 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR812d | Cleavage | 5.0 | 9.999 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR812e | Cleavage | 5.0 | 9.999 | 1 | 22 |
| Osa07LNT0378100.1 | osa-miR2922 | Cleavage | 4.5 | 4.574 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0378100.1 | 7 | gp7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378100.1 | 7 | gw7 | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378100.1 | 7 | tp7b | Morphological trait | Culm/leaf | R1440 | RG128 |
| Osa07LNT0378100.1 | 7 | yd7a | Morphological trait | Panicle/flower | R1440 | RG128 |
| Osa07LNT0378100.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0378100.1 | 7 | qah7 | Physiological trait | Flowering | R2401 | C1226 |
| Osa07LNT0378100.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0378100.1 | 7 | qHd-7 | Physiological trait | Flowering | RM125 | RM432 |
| Osa07LNT0378100.1 | 7 | nan | Physiological trait | Flowering | R2401 | R1440 |
| Osa07LNT0378100.1 | 7 | hwd2 | Physiological trait | Lethality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)